Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2192
         (681 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB028999-1|BAA83028.1|  804|Homo sapiens KIAA1076 protein protein.     31   3.8  
AE006465-4|AAK61258.1|  402|Homo sapiens unknown protein.              30   6.6  

>AB028999-1|BAA83028.1|  804|Homo sapiens KIAA1076 protein protein.
          Length = 804

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 24/79 (30%), Positives = 31/79 (39%)
 Frame = -1

Query: 408 PDTAWILGPSSCSLGPMTCPTTPASEPRPPLDGASMPYCLLSSMFCRSRFATNLVFASIN 229
           P T  + G  + S    T P TP  E  PPL G S    L S     S F+      S++
Sbjct: 199 PHTPGLCGSLAKSQSTETVPATPGGE--PPLSGGSSGLSLSSPQVPGSPFSYPAPSPSLS 256

Query: 228 ELIFPKTNPSTAFLTPNFA 172
               P+T       TP F+
Sbjct: 257 SGGLPRTPGRDFSFTPTFS 275


>AE006465-4|AAK61258.1|  402|Homo sapiens unknown protein.
          Length = 402

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
 Frame = -1

Query: 396 WILGPSSCSLGPMTCPTTP---ASEPRPPLDGASMPYC 292
           W++ P   +  P T  T P    + P PP  GA +P C
Sbjct: 331 WLVEPGEAAQDPATRRTAPPRRTASPEPPAPGAPLPAC 368


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,452,382
Number of Sequences: 237096
Number of extensions: 685649
Number of successful extensions: 3170
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3160
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)