Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2185
         (431 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   1.6  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   6.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    20   8.8  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    20   8.8  

>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -2

Query: 322 PGYENYGDQNRTSMSHEMRYAPDCACHTKCVI 227
           P  ++  D+N  ++  +   APDC   T+CV+
Sbjct: 139 PDCKDESDENSCTVETDPNRAPDCD-PTQCVL 169


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
          growth factor 2 protein.
          Length = 439

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 59 EIVLYYDNTIHYR 97
          ++V YYD+  H+R
Sbjct: 25 KVVCYYDSKSHFR 37


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -3

Query: 156 YCIFIYLLVVCFV 118
           +C FIYL  V ++
Sbjct: 147 FCYFIYLFTVYYI 159


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = -3

Query: 189 QSLVLIARFSHYCIFIYLLVVCFVS 115
           +S   +++   +C F+  LV C V+
Sbjct: 32  ESYFRLSKAKSFCTFVAALVYCSVT 56


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,085
Number of Sequences: 336
Number of extensions: 2149
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9565283
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)