Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2183
         (522 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1WIW9 Cluster: Putative uncharacterized protein precur...    35   0.98 
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    35   0.98 
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    34   2.3  
UniRef50_A1SN81 Cluster: Putative uncharacterized protein; n=1; ...    33   3.0  
UniRef50_UPI0000E8162F Cluster: PREDICTED: hypothetical protein;...    33   4.0  
UniRef50_Q41HP4 Cluster: Putative uncharacterized protein precur...    33   4.0  
UniRef50_Q67VQ0 Cluster: Putative uncharacterized protein OSJNBb...    33   4.0  
UniRef50_UPI0000EBD75B Cluster: PREDICTED: hypothetical protein;...    32   6.9  
UniRef50_A1G260 Cluster: Putative uncharacterized protein; n=1; ...    32   6.9  
UniRef50_A3ADB1 Cluster: Putative uncharacterized protein; n=1; ...    32   6.9  
UniRef50_A4UBN4 Cluster: Predicted protein; n=1; Magnaporthe gri...    32   6.9  
UniRef50_A5NW51 Cluster: Transcriptional regulator, TetR family;...    32   9.2  
UniRef50_Q5B1Y5 Cluster: Predicted protein; n=1; Emericella nidu...    32   9.2  
UniRef50_P00522 Cluster: Tyrosine-protein kinase Abl; n=5; Eumet...    32   9.2  

>UniRef50_A1WIW9 Cluster: Putative uncharacterized protein
           precursor; n=1; Verminephrobacter eiseniae EF01-2|Rep:
           Putative uncharacterized protein precursor -
           Verminephrobacter eiseniae (strain EF01-2)
          Length = 363

 Score = 35.1 bits (77), Expect = 0.98
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -2

Query: 227 SSRPLAGAWSGPQGNPSARTCGSLPNEAGVMRCW 126
           S+RP A AW   +  P A   G LP +A  +RCW
Sbjct: 236 STRPFAQAWRTVKSRPRAGAGGVLPADADDLRCW 269


>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 35.1 bits (77), Expect = 0.98
 Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
 Frame = +3

Query: 228 PHDAMSPVTVLVEPVACDEGLDERINPQTQPTEFLAGSSQWVALXIRW*ILRSTALARAV 407
           P D++S +  L     C   +    NP+TQP +FLAGSSQ            +  L   V
Sbjct: 44  PRDSLSVLLDLSSTGYCPCRVRRATNPKTQPMKFLAGSSQSSRFRSDGRFCEALLLLGLV 103

Query: 408 LA-ILRFEPREL 440
           LA  LR  P EL
Sbjct: 104 LANSLRLSPYEL 115


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 33.9 bits (74), Expect = 2.3
 Identities = 16/25 (64%), Positives = 18/25 (72%)
 Frame = +1

Query: 271 SLATKGSTSELTHRHSPLSFSPDLL 345
           SL T G ++E  HR  PLSFSPDLL
Sbjct: 380 SLKTTGHSTENEHRCCPLSFSPDLL 404


>UniRef50_A1SN81 Cluster: Putative uncharacterized protein; n=1;
           Nocardioides sp. JS614|Rep: Putative uncharacterized
           protein - Nocardioides sp. (strain BAA-499 / JS614)
          Length = 287

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = -2

Query: 275 SDGFDEDGDRAHCVVGSSRPL--AGAWSGPQGNPSARTCG 162
           SDG D   D      G+S P+  AGA SGP G PS+ T G
Sbjct: 136 SDGSDATVDPTDAPAGTSTPVVPAGAPSGPTGGPSSGTSG 175


>UniRef50_UPI0000E8162F Cluster: PREDICTED: hypothetical protein;
           n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
           - Gallus gallus
          Length = 427

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +3

Query: 99  HLQACQILHPAAHHPCLIRQGATCPGRGVSLRPAPRPRKGTRRPHD-AMSPVTV 257
           +++ C I  P   H C  R+ +  P RG   R + RP    R PHD A SP +V
Sbjct: 298 YVRPCDITCPVISHKCDYRRVSVLPARGSVTRGSTRP----RLPHDSAESPFSV 347


>UniRef50_Q41HP4 Cluster: Putative uncharacterized protein
           precursor; n=1; Exiguobacterium sibiricum 255-15|Rep:
           Putative uncharacterized protein precursor -
           Exiguobacterium sibiricum 255-15
          Length = 210

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +1

Query: 94  THIFKPARYSIQQRITPASLGREPHVRAEGFP*GPL 201
           T+I+KPA Y+   +I P    + P   A+ FP GP+
Sbjct: 29  TYIYKPADYTFHYKIKPRKAMKGPKFGAKPFPKGPM 64


>UniRef50_Q67VQ0 Cluster: Putative uncharacterized protein
           OSJNBb0061B07.10; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OSJNBb0061B07.10 - Oryza sativa subsp. japonica (Rice)
          Length = 170

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 20/40 (50%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +3

Query: 126 PAAHHPCLIRQGATCPGRGVSL-RPAPRPRKGTRR-PHDA 239
           PA   PC  R  A CP RG  L   APR R  +RR PH A
Sbjct: 81  PATTSPCPSRAAAACPRRGRRLAATAPRRRLPSRRAPHPA 120


>UniRef50_UPI0000EBD75B Cluster: PREDICTED: hypothetical protein;
           n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
           Bos taurus
          Length = 170

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 23/61 (37%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = +1

Query: 142 PASLGREPHVRAEGFP*GPLHAPARGRDDPTTQ*ARSPSSSNPSLATKGST-SELTHRHS 318
           P SL   P   A GFP  P+   ARG  DP  Q +RS     P   +   T    THR +
Sbjct: 37  PRSLQAHPGRGAPGFPRRPVRG-ARGAADPPAQGSRSRRGKQPLPGSATDTHPPSTHRPA 95

Query: 319 P 321
           P
Sbjct: 96  P 96


>UniRef50_A1G260 Cluster: Putative uncharacterized protein; n=1;
           Stenotrophomonas maltophilia R551-3|Rep: Putative
           uncharacterized protein - Stenotrophomonas maltophilia
           R551-3
          Length = 180

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 20/63 (31%), Positives = 30/63 (47%)
 Frame = +3

Query: 159 GATCPGRGVSLRPAPRPRKGTRRPHDAMSPVTVLVEPVACDEGLDERINPQTQPTEFLAG 338
           GA+   R   L  AP P  G R P   ++P T+ ++ V    G  ER  P T  +   AG
Sbjct: 47  GASEGYRMPQLYAAPDPEVGDRDPRAELAPTTICLQVVVDANGAVERSLPLTDRSGCAAG 106

Query: 339 SSQ 347
           +++
Sbjct: 107 AAR 109


>UniRef50_A3ADB1 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (japonica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 323

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 25/72 (34%), Positives = 34/72 (47%)
 Frame = +1

Query: 124 IQQRITPASLGREPHVRAEGFP*GPLHAPARGRDDPTTQ*ARSPSSSNPSLATKGSTSEL 303
           ++QR  P +  R+ H RA G   G     A G    T   A +PSS     +T GST   
Sbjct: 76  VEQRAVPGAARRDRH-RAAGDGAGGAVDAADGTCTCTAP-ATAPSSGGRCGSTSGSTPPP 133

Query: 304 THRHSPLSFSPD 339
           T   +P S++PD
Sbjct: 134 TSTTTPSSWNPD 145


>UniRef50_A4UBN4 Cluster: Predicted protein; n=1; Magnaporthe
           grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
           blast fungus) (Pyricularia grisea)
          Length = 218

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 202 HAPARGRDDPTTQ*ARSPSSSNPSLATKGSTSE 300
           H  ARGR+ P  Q  R+P  + PS A +G  +E
Sbjct: 8   HTDARGREFPVNQCKRTPHGNGPSSADEGDEAE 40


>UniRef50_A5NW51 Cluster: Transcriptional regulator, TetR family;
           n=1; Methylobacterium sp. 4-46|Rep: Transcriptional
           regulator, TetR family - Methylobacterium sp. 4-46
          Length = 978

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +3

Query: 156 QGATCPGRGV-SLRPAPRPRKGTRRPHDAMSP 248
           +G T  G G+  LRPAPRPR+  RR   A  P
Sbjct: 348 RGRTARGAGLLRLRPAPRPRRDRRRLRSAPDP 379


>UniRef50_Q5B1Y5 Cluster: Predicted protein; n=1; Emericella
           nidulans|Rep: Predicted protein - Emericella nidulans
           (Aspergillus nidulans)
          Length = 200

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
 Frame = +1

Query: 109 PARYS---IQQRITPASLGREPHVRAEGFP*GPLHAPARGRDDPTTQ*ARSPSSSNPSLA 279
           PA Y    IQ R   ASL     V  E F    +       DD +   A++P  S   + 
Sbjct: 108 PAAYHDEFIQDRQATASLSSTTAVDPESFSDSTMTLFLDPLDDDSATKAKAPIRSTSPVV 167

Query: 280 TKGSTSELTHRHSPLSFSPD 339
             G+TS L  + +P  F+P+
Sbjct: 168 RSGATSTLPGKGTPTPFAPN 187


>UniRef50_P00522 Cluster: Tyrosine-protein kinase Abl; n=5;
           Eumetazoa|Rep: Tyrosine-protein kinase Abl - Drosophila
           melanogaster (Fruit fly)
          Length = 1620

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = +1

Query: 145 ASLGREPHVRAEGFP*GPLHAPARGRDDPTTQ*ARSPSSSNPSLATKGST 294
           ASL   P +  +G P G    P    +DP  Q A +P S   S +TK ST
Sbjct: 679 ASLSLTPQMVKKGLPGGQALTPNAHHNDPHQQQASTPMSETGSTSTKLST 728


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 428,771,913
Number of Sequences: 1657284
Number of extensions: 8735578
Number of successful extensions: 29776
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 27831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29735
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)