Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2183
         (522 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     25   0.54 
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   5.0  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   5.0  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            21   5.0  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   5.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.6  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   6.6  

>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 96  THLQACQILHPAAHHPCLI 152
           +H+Q  Q+ HPAA H  L+
Sbjct: 112 SHMQFMQLPHPAAAHSALL 130


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 350 GRAXDPVVDSAKHCSC 397
           GR   P V++ KH SC
Sbjct: 342 GRKVSPRVNTIKHTSC 357


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 350 GRAXDPVVDSAKHCSC 397
           GR   P V++ KH SC
Sbjct: 342 GRKVSPRVNTIKHTSC 357


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 126 PAAHHPCLIRQGATCPGRGVSLRPAPRPRKGTRR 227
           P A +P  +  G   PG  V   P  + +K TR+
Sbjct: 93  PPAGYPMDVPHGMGSPGVNVPEYPWMKEKKTTRK 126


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 126 PAAHHPCLIRQGATCPGRGVSLRPAPRPRKGTRR 227
           P A +P  +  G   PG  V   P  + +K TR+
Sbjct: 93  PPAGYPMDVPHGMGSPGVNVPEYPWMKEKKTTRK 126


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 12/47 (25%), Positives = 17/47 (36%)
 Frame = +3

Query: 138  HPCLIRQGATCPGRGVSLRPAPRPRKGTRRPHDAMSPVTVLVEPVAC 278
            H C  +    C GR    +    P+ G  +P+ A S       P  C
Sbjct: 1245 HMCDWKYKVKCVGRKQLAQKYQLPKMGGPQPYSACSENAFAAYPGDC 1291


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = -2

Query: 194 PQGNPSARTCGSLPNEAGVMRCWMEYLAGLKMCV 93
           PQG  + R      ++   +R  +EY+  LK  +
Sbjct: 122 PQGPSTGRGASKKLSKVETLRLAVEYIRSLKQMI 155


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,631
Number of Sequences: 336
Number of extensions: 1885
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)