Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2183
(522 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ363529-1|ABC88012.1| 1099|Homo sapiens low-voltage-activated c... 30 4.3
DQ363528-1|ABC88011.1| 1083|Homo sapiens low-voltage-activated c... 30 4.3
DQ363527-1|ABC88010.1| 1088|Homo sapiens low-voltage-activated c... 30 4.3
DQ363526-1|ABC88009.1| 1077|Homo sapiens low-voltage-activated c... 30 4.3
AJ420779-1|CAD12646.1| 2347|Homo sapiens calcium channel, voltag... 30 4.3
AF223563-1|AAF60163.1| 1536|Homo sapiens low-voltage-activated c... 30 4.3
AF073931-1|AAD17668.1| 2353|Homo sapiens low-voltage activated c... 30 4.3
AF051946-1|AAC67239.3| 2353|Homo sapiens T-type calcium channel ... 30 4.3
AE006466-3|AAK61268.1| 2373|Homo sapiens voltage dependent t-typ... 30 4.3
>DQ363529-1|ABC88012.1| 1099|Homo sapiens low-voltage-activated
calcium channel alpha1H subunit splice variant 577
protein.
Length = 1099
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = +3
Query: 159 GATCPGRGVSLRPAPRPRKGTRRPHDAMSPVTVLVEPVACDEG 287
G+ PG + P P G RR MSP + VEP A DEG
Sbjct: 907 GSGEPGEAKAWGPEAEPALGARRKKK-MSPPCISVEPPAEDEG 948
>DQ363528-1|ABC88011.1| 1083|Homo sapiens low-voltage-activated
calcium channel alpha1H subunit splice variant 544
protein.
Length = 1083
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = +3
Query: 159 GATCPGRGVSLRPAPRPRKGTRRPHDAMSPVTVLVEPVACDEG 287
G+ PG + P P G RR MSP + VEP A DEG
Sbjct: 891 GSGEPGEAKAWGPEAEPALGARRKKK-MSPPCISVEPPAEDEG 932
>DQ363527-1|ABC88010.1| 1088|Homo sapiens low-voltage-activated
calcium channel alpha1H subunit splice variant 513
protein.
Length = 1088
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = +3
Query: 159 GATCPGRGVSLRPAPRPRKGTRRPHDAMSPVTVLVEPVACDEG 287
G+ PG + P P G RR MSP + VEP A DEG
Sbjct: 896 GSGEPGEAKAWGPEAEPALGARRKKK-MSPPCISVEPPAEDEG 937
>DQ363526-1|ABC88009.1| 1077|Homo sapiens low-voltage-activated
calcium channel alpha1H subunit splice variant 512
protein.
Length = 1077
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = +3
Query: 159 GATCPGRGVSLRPAPRPRKGTRRPHDAMSPVTVLVEPVACDEG 287
G+ PG + P P G RR MSP + VEP A DEG
Sbjct: 885 GSGEPGEAKAWGPEAEPALGARRKKK-MSPPCISVEPPAEDEG 926
>AJ420779-1|CAD12646.1| 2347|Homo sapiens calcium channel,
voltage-dependent, T type, alphant regulator of
chromatin, sub protein.
Length = 2347
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = +3
Query: 159 GATCPGRGVSLRPAPRPRKGTRRPHDAMSPVTVLVEPVACDEG 287
G+ PG + P P G RR MSP + VEP A DEG
Sbjct: 2155 GSGEPGEAKAWGPEAEPALGARRKKK-MSPPCISVEPPAEDEG 2196
>AF223563-1|AAF60163.1| 1536|Homo sapiens low-voltage-activated
calcium channel alpha13.2 subunit delta25B splice variant
protein.
Length = 1536
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = +3
Query: 159 GATCPGRGVSLRPAPRPRKGTRRPHDAMSPVTVLVEPVACDEG 287
G+ PG + P P G RR MSP + VEP A DEG
Sbjct: 1344 GSGEPGEAKAWGPEAEPALGARRKKK-MSPPCISVEPPAEDEG 1385
>AF073931-1|AAD17668.1| 2353|Homo sapiens low-voltage activated
calcium channel alpha 1H protein.
Length = 2353
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = +3
Query: 159 GATCPGRGVSLRPAPRPRKGTRRPHDAMSPVTVLVEPVACDEG 287
G+ PG + P P G RR MSP + VEP A DEG
Sbjct: 2161 GSGEPGEAKAWGPEAEPALGARRKKK-MSPPCISVEPPAEDEG 2202
>AF051946-1|AAC67239.3| 2353|Homo sapiens T-type calcium channel alpha
1H subunit protein.
Length = 2353
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = +3
Query: 159 GATCPGRGVSLRPAPRPRKGTRRPHDAMSPVTVLVEPVACDEG 287
G+ PG + P P G RR MSP + VEP A DEG
Sbjct: 2161 GSGEPGEAKAWGPEAEPALGARRKKK-MSPPCISVEPPAEDEG 2202
>AE006466-3|AAK61268.1| 2373|Homo sapiens voltage dependent t-type
calcium channel alpha-1H subunit protein.
Length = 2373
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = +3
Query: 159 GATCPGRGVSLRPAPRPRKGTRRPHDAMSPVTVLVEPVACDEG 287
G+ PG + P P G RR MSP + VEP A DEG
Sbjct: 2181 GSGEPGEAKAWGPEAEPALGARRKKK-MSPPCISVEPPAEDEG 2222
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,066,454
Number of Sequences: 237096
Number of extensions: 1371454
Number of successful extensions: 3994
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3990
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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