Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2183
         (522 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.5  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   3.3  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    22   4.4  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   7.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   7.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.7  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +3

Query: 222 RRPHDAMSPVTVLVEPVACDEGLDERINPQT 314
           RR  D    V  ++EP    EGL E +  +T
Sbjct: 600 RRSGDVAVIVPPIIEPFTFQEGLSEGMRTRT 630


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -2

Query: 251 DRAHCVVGSSRPLAGAWSGPQGN 183
           D  + V G     AG W G QGN
Sbjct: 743 DMTYSVQGVGVVNAGGWLGQQGN 765


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -2

Query: 311 LWVNSLVEPFVASDGFDEDGDRAHCVVGSS 222
           +WV  +V   V S G D +     C+V +S
Sbjct: 115 IWVPDIVMHSVTSVGIDLEMPSVECIVFNS 144


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = -2

Query: 308 WVNSLVEPFV 279
           W+NS + PF+
Sbjct: 349 WINSAINPFI 358


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +1

Query: 232 TTQ*ARSPSSSNPSLATKGSTSELTHRHSPLSFS 333
           T+  ARSPSS   +     + S L+  HS L+ S
Sbjct: 676 TSPPARSPSSQAQASQCPQTASLLSSTHSTLARS 709


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 381 AESTTGSXARPTEKIRRETQ 322
           A  TTG+   PT ++R+  Q
Sbjct: 252 AAMTTGTTTIPTRRLRKRRQ 271


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,128
Number of Sequences: 438
Number of extensions: 2395
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)