Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2181
(319 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 27 0.041
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 23 0.89
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 3.6
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 3.6
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 3.6
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 4.7
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 4.7
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 4.7
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 4.7
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 4.7
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 4.7
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 20 6.3
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 20 6.3
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 20 8.3
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 27.5 bits (58), Expect = 0.041
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -1
Query: 244 VCGSSMLSTTRSLTAAHCWFD 182
+CG++++S LTAAHC D
Sbjct: 187 ICGATIISKRYVLTAAHCIID 207
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 23.0 bits (47), Expect = 0.89
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -2
Query: 225 SVPLGLSQLLTAGSME-LDKHYLSQWPLEQSLFLLEVLECAPQTYG 91
+V L + +G ME LD H W L ++ E LE AP T G
Sbjct: 778 AVTLAILDFHESGFMESLDNH----WILRSNVQQCEQLEKAPNTLG 819
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 3.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 231 DEPHTELALAPYFYDLNRPVNHKLPVN 311
+EPH APY Y+ ++ LP+N
Sbjct: 115 EEPH-----APYRYEAVAVIHKDLPIN 136
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 3.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 231 DEPHTELALAPYFYDLNRPVNHKLPVN 311
+EPH APY Y+ ++ LP+N
Sbjct: 115 EEPH-----APYRYEAVAVIHKDLPIN 136
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 3.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 231 DEPHTELALAPYFYDLNRPVNHKLPVN 311
+EPH APY Y+ ++ LP+N
Sbjct: 115 EEPH-----APYRYEAVAVIHKDLPIN 136
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 20.6 bits (41), Expect = 4.7
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 60 IKFLGSQFSCIRTFVVRTLTPPVKTVI 140
I LGS F+CI V ++ V +I
Sbjct: 254 IPLLGSYFNCIMFMVASSVVLTVLVLI 280
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 20.6 bits (41), Expect = 4.7
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 60 IKFLGSQFSCIRTFVVRTLTPPVKTVI 140
I LGS F+CI V ++ V +I
Sbjct: 254 IPLLGSYFNCIMFMVASSVVLTVLVLI 280
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 20.6 bits (41), Expect = 4.7
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 60 IKFLGSQFSCIRTFVVRTLTPPVKTVI 140
I LGS F+CI V ++ V +I
Sbjct: 254 IPLLGSYFNCIMFMVASSVVLTVLVLI 280
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 20.6 bits (41), Expect = 4.7
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 45 TAMSLIKFLGSQFSCIRTFVVRTLTPPVKTVI 140
T + +GS F+CI V ++ V +I
Sbjct: 249 TTSDAVPLIGSYFNCIMFMVASSVVLTVLVLI 280
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 20.6 bits (41), Expect = 4.7
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 45 TAMSLIKFLGSQFSCIRTFVVRTLTPPVKTVI 140
T + +GS F+CI V ++ V +I
Sbjct: 249 TTSDAVPLIGSYFNCIMFMVASSVVLTVLVLI 280
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 20.6 bits (41), Expect = 4.7
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 45 TAMSLIKFLGSQFSCIRTFVVRTLTPPVKTVI 140
T + +GS F+CI V ++ V +I
Sbjct: 249 TTSDAVPLIGSYFNCIMFMVASSVVLTVLVLI 280
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.2 bits (40), Expect = 6.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 60 IKFLGSQFSCIRTFVVRTLTPPVKTVIV 143
I LGS F+CI V ++ V TV+V
Sbjct: 322 IPLLGSYFNCIMFMVASSV---VLTVLV 346
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.2 bits (40), Expect = 6.3
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 45 TAMSLIKFLGSQFSCIRTFVVRTLTPPVKTVIV 143
T + +GS F+CI V ++ V TV+V
Sbjct: 317 TTSDAVPLIGSYFNCIMFMVASSV---VLTVLV 346
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 19.8 bits (39), Expect = 8.3
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +2
Query: 98 VCGAHSNTSSKNSDCSKGH 154
+ GA+ N KN+ C+K +
Sbjct: 403 ILGANVNNLIKNTRCAKSN 421
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,443
Number of Sequences: 438
Number of extensions: 1795
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 6844365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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