Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2179
(392 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q08473 Cluster: RNA-binding protein squid; n=22; Endopt... 203 8e-52
UniRef50_UPI0000DB6DF2 Cluster: PREDICTED: similar to squid CG16... 173 8e-43
UniRef50_O14979 Cluster: Heterogeneous nuclear ribonucleoprotein... 117 7e-26
UniRef50_Q14103 Cluster: Heterogeneous nuclear ribonucleoprotein... 114 5e-25
UniRef50_A4V6K2 Cluster: PRM10 protein; n=1; Dugesia japonica|Re... 109 2e-23
UniRef50_O94432 Cluster: mRNA cleavage factor complex subunit; n... 109 2e-23
UniRef50_UPI0000DB6D53 Cluster: PREDICTED: similar to CG32169-PA... 107 1e-22
UniRef50_Q4W5P0 Cluster: Homologous to drosophila sqd (Squid) pr... 107 1e-22
UniRef50_Q6PNM9 Cluster: AUF1 similar protein; n=3; Paracentrotu... 106 2e-22
UniRef50_Q5DH48 Cluster: SJCHGC06087 protein; n=1; Schistosoma j... 105 3e-22
UniRef50_Q9VVE5 Cluster: CG32169-PA; n=9; Endopterygota|Rep: CG3... 105 4e-22
UniRef50_A3LZT4 Cluster: Predicted protein; n=1; Pichia stipitis... 104 7e-22
UniRef50_Q6CC04 Cluster: Yarrowia lipolytica chromosome C of str... 103 1e-21
UniRef50_Q6BL35 Cluster: Debaryomyces hansenii chromosome F of s... 103 1e-21
UniRef50_UPI0001560FCC Cluster: PREDICTED: hypothetical protein;... 103 2e-21
UniRef50_Q8MS04 Cluster: RH49436p; n=9; Endopterygota|Rep: RH494... 101 7e-21
UniRef50_Q5K6W6 Cluster: Putative uncharacterized protein; n=1; ... 99 3e-20
UniRef50_Q4WHA5 Cluster: Heterogeneous nuclear ribonucleoprotein... 99 3e-20
UniRef50_UPI0000E4934F Cluster: PREDICTED: similar to musashi nr... 98 6e-20
UniRef50_O43347 Cluster: RNA-binding protein Musashi homolog 1; ... 98 6e-20
UniRef50_Q9HEH4 Cluster: Related to heterogeneous nuclear ribonu... 96 2e-19
UniRef50_Q9UAF2 Cluster: Musashi; n=1; Halocynthia roretzi|Rep: ... 96 2e-19
UniRef50_A7SCX6 Cluster: Predicted protein; n=1; Nematostella ve... 96 2e-19
UniRef50_A4R1M8 Cluster: Putative uncharacterized protein; n=1; ... 95 3e-19
UniRef50_Q21911 Cluster: Putative uncharacterized protein msi-1;... 94 7e-19
UniRef50_Q99383 Cluster: Nuclear polyadenylated RNA-binding prot... 94 1e-18
UniRef50_P48809 Cluster: Heterogeneous nuclear ribonucleoprotein... 93 1e-18
UniRef50_Q9D3U4 Cluster: Adult male testis cDNA, RIKEN full-leng... 91 7e-18
UniRef50_A4V6K1 Cluster: DAZ-associated protein; n=2; Platyhelmi... 90 1e-17
UniRef50_Q96EP5 Cluster: DAZ-associated protein 1; n=39; Euteleo... 88 5e-17
UniRef50_UPI000023D975 Cluster: hypothetical protein FG10273.1; ... 88 6e-17
UniRef50_Q9LHL2 Cluster: Similarity to RNA binding protein; n=13... 88 6e-17
UniRef50_Q1ENZ5 Cluster: RNA-binding protein, putative; n=2; Mag... 87 9e-17
UniRef50_Q66IT0 Cluster: MGC84815 protein; n=1; Xenopus laevis|R... 87 1e-16
UniRef50_Q8W034 Cluster: Ribonucleoprotein 1; n=5; core eudicoty... 85 5e-16
UniRef50_Q86ER1 Cluster: Clone ZZD1516 mRNA sequence; n=2; Schis... 85 6e-16
UniRef50_Q9LNP1 Cluster: F1L3.34; n=2; Arabidopsis thaliana|Rep:... 83 1e-15
UniRef50_P51991 Cluster: Heterogeneous nuclear ribonucleoprotein... 83 1e-15
UniRef50_Q4PBU3 Cluster: Putative uncharacterized protein; n=1; ... 66 2e-15
UniRef50_Q9FM47 Cluster: Similarity to RNA binding protein; n=5;... 83 2e-15
UniRef50_Q9SU99 Cluster: HnRNP-like protein; n=10; core eudicoty... 83 2e-15
UniRef50_Q5TTQ2 Cluster: ENSANGP00000026814; n=3; Endopterygota|... 83 2e-15
UniRef50_A2YWJ2 Cluster: Putative uncharacterized protein; n=3; ... 81 6e-15
UniRef50_Q8W4A6 Cluster: Putative uncharacterized protein MJH23.... 81 7e-15
UniRef50_P09651 Cluster: Heterogeneous nuclear ribonucleoprotein... 80 1e-14
UniRef50_Q9U5E3 Cluster: CiMsi; n=1; Ciona intestinalis|Rep: CiM... 80 2e-14
UniRef50_A7NUC5 Cluster: Chromosome chr18 scaffold_1, whole geno... 79 3e-14
UniRef50_P48810 Cluster: Heterogeneous nuclear ribonucleoprotein... 79 4e-14
UniRef50_Q4SQV2 Cluster: Chromosome 1 SCAF14529, whole genome sh... 78 5e-14
UniRef50_UPI000156016B Cluster: PREDICTED: hypothetical protein;... 78 7e-14
UniRef50_Q8W555 Cluster: AT3g07810/F17A17_15; n=11; Magnoliophyt... 78 7e-14
UniRef50_Q13151 Cluster: Heterogeneous nuclear ribonucleoprotein... 77 9e-14
UniRef50_A4V6N1 Cluster: HnRNP A2/B1 protein; n=1; Dugesia japon... 77 1e-13
UniRef50_Q7XDI5 Cluster: RNA recognition motif family protein, e... 76 3e-13
UniRef50_Q54D98 Cluster: Putative uncharacterized protein; n=1; ... 76 3e-13
UniRef50_Q26658 Cluster: Stage specific activator protein; n=3; ... 75 4e-13
UniRef50_UPI0000E4626F Cluster: PREDICTED: similar to heterogene... 75 6e-13
UniRef50_Q4SEZ3 Cluster: Chromosome 1 SCAF14609, whole genome sh... 74 9e-13
UniRef50_Q94AC3 Cluster: AT4g36960/C7A10_400; n=11; Magnoliophyt... 74 1e-12
UniRef50_A7RG33 Cluster: Predicted protein; n=1; Nematostella ve... 74 1e-12
UniRef50_Q22037 Cluster: Heterogeneous nuclear ribonucleoprotein... 74 1e-12
UniRef50_Q8CD63 Cluster: 13 days embryo male testis cDNA, RIKEN ... 72 3e-12
UniRef50_UPI00005A4DCF Cluster: PREDICTED: similar to Heterogene... 72 5e-12
UniRef50_A7ART3 Cluster: Ribonucleoprotein, putative; n=1; Babes... 71 1e-11
UniRef50_Q9SM01 Cluster: RNA binding protein; n=2; Arabidopsis t... 70 2e-11
UniRef50_A2YHR7 Cluster: Putative uncharacterized protein; n=2; ... 70 2e-11
UniRef50_A4RXB1 Cluster: Predicted protein; n=2; Ostreococcus|Re... 69 2e-11
UniRef50_Q02926 Cluster: Ribonucleoprotein RB97D; n=7; Sophophor... 69 3e-11
UniRef50_UPI0000F1F0C3 Cluster: PREDICTED: similar to LOC561459 ... 69 4e-11
UniRef50_Q5CS11 Cluster: Musashi. RRM domain containing protein,... 68 7e-11
UniRef50_Q4U8S8 Cluster: RNA-binding protein, putative; n=2; The... 67 1e-10
UniRef50_A7APD8 Cluster: RNA recognition motif domain containing... 67 1e-10
UniRef50_A3FQK0 Cluster: RNA recognition motif (RRM)-containing ... 67 1e-10
UniRef50_A7SSE1 Cluster: Predicted protein; n=3; Nematostella ve... 67 1e-10
UniRef50_A7SIE8 Cluster: Predicted protein; n=2; Nematostella ve... 67 1e-10
UniRef50_Q75KB4 Cluster: Putative RNA binding protein; n=4; Oryz... 66 3e-10
UniRef50_Q32LZ4 Cluster: Msi2h protein; n=4; Eutheria|Rep: Msi2h... 65 4e-10
UniRef50_UPI0000E4A88D Cluster: PREDICTED: similar to MGC88935 p... 65 5e-10
UniRef50_UPI0000E4615D Cluster: PREDICTED: similar to heterogene... 65 5e-10
UniRef50_Q5CT90 Cluster: RRM domain containing protein; n=1; Cry... 64 1e-09
UniRef50_Q8WSM6 Cluster: Putative uncharacterized protein; n=4; ... 62 3e-09
UniRef50_A7SIF0 Cluster: Predicted protein; n=1; Nematostella ve... 62 3e-09
UniRef50_Q8RWN5 Cluster: RNA-binding protein-like; n=3; Arabidop... 62 5e-09
UniRef50_Q9VFT3 Cluster: CG9654-PA; n=4; Drosophila melanogaster... 62 5e-09
UniRef50_A7RM72 Cluster: Predicted protein; n=1; Nematostella ve... 62 5e-09
UniRef50_Q6IRQ4 Cluster: MGC82187 protein; n=6; Tetrapoda|Rep: M... 60 1e-08
UniRef50_A7QX84 Cluster: Chromosome undetermined scaffold_215, w... 60 1e-08
UniRef50_A7PVU6 Cluster: Chromosome chr8 scaffold_34, whole geno... 60 1e-08
UniRef50_UPI0000E45D7B Cluster: PREDICTED: similar to heterogene... 60 1e-08
UniRef50_Q7XTU5 Cluster: OSJNBb0034I13.9 protein; n=4; Oryza sat... 60 2e-08
UniRef50_Q4U9D6 Cluster: RNA binding protein, putative; n=2; The... 60 2e-08
UniRef50_A5BGN9 Cluster: Putative uncharacterized protein; n=1; ... 59 3e-08
UniRef50_Q4UI71 Cluster: RNA-binding (SR) protein, putative; n=2... 59 3e-08
UniRef50_UPI00015560CE Cluster: PREDICTED: similar to heterogene... 58 5e-08
UniRef50_Q9M9E6 Cluster: F3F9.20; n=8; Arabidopsis thaliana|Rep:... 58 5e-08
UniRef50_O23189 Cluster: RNA-binding like protein; n=1; Arabidop... 58 5e-08
UniRef50_A5K494 Cluster: Nucleic acid binding factor, putative; ... 58 5e-08
UniRef50_UPI000049A3A1 Cluster: RNA-binding protein; n=1; Entamo... 58 8e-08
UniRef50_Q6DHU2 Cluster: Zgc:92062; n=4; Clupeocephala|Rep: Zgc:... 58 8e-08
UniRef50_A2EQG8 Cluster: Putative uncharacterized protein; n=1; ... 58 8e-08
UniRef50_Q0DXG2 Cluster: Os02g0755400 protein; n=2; Oryza sativa... 57 1e-07
UniRef50_A2X9R7 Cluster: Putative uncharacterized protein; n=1; ... 57 1e-07
UniRef50_Q8IIT2 Cluster: Nucleic acid binding factor, putative; ... 57 1e-07
UniRef50_A7PMT7 Cluster: Chromosome chr14 scaffold_21, whole gen... 57 1e-07
UniRef50_Q552K5 Cluster: Putative uncharacterized protein; n=1; ... 56 2e-07
UniRef50_Q13148 Cluster: TAR DNA-binding protein 43; n=36; Coelo... 56 2e-07
UniRef50_UPI0000F2CBBE Cluster: PREDICTED: similar to musashi ho... 56 2e-07
UniRef50_Q4T824 Cluster: Chromosome undetermined SCAF7912, whole... 56 2e-07
UniRef50_Q1LVU9 Cluster: Cold inducible RNA binding protein; n=8... 56 2e-07
UniRef50_Q015S2 Cluster: Single-stranded DNA binding protein, pu... 56 2e-07
UniRef50_UPI0000E45F82 Cluster: PREDICTED: hypothetical protein;... 56 3e-07
UniRef50_Q9FX45 Cluster: RNA-binding glycine-rich protein, putat... 56 3e-07
UniRef50_O75526 Cluster: RNA-binding motif protein, X-linked-lik... 56 3e-07
UniRef50_Q8LPB0 Cluster: Glycine-rich RNA-binding protein; n=1; ... 55 4e-07
UniRef50_A7PA84 Cluster: Chromosome chr14 scaffold_9, whole geno... 55 4e-07
UniRef50_Q4PFD1 Cluster: Putative uncharacterized protein; n=1; ... 55 4e-07
UniRef50_Q4P2L3 Cluster: Putative uncharacterized protein; n=1; ... 55 4e-07
UniRef50_UPI00005A196B Cluster: PREDICTED: similar to Heterogene... 55 6e-07
UniRef50_Q6ZZX5 Cluster: Heterogeneous nuclear ribonucleoprotein... 55 6e-07
UniRef50_Q4S8N9 Cluster: Chromosome 7 SCAF14703, whole genome sh... 55 6e-07
UniRef50_A0KJ75 Cluster: RNA-binding protein; n=5; Bacteria|Rep:... 55 6e-07
UniRef50_Q7XI13 Cluster: Glycine-rich RNA-binding protein-like; ... 55 6e-07
UniRef50_Q4MZK1 Cluster: Nucleic acid binding factor, putative; ... 55 6e-07
UniRef50_A7RFA9 Cluster: Predicted protein; n=1; Nematostella ve... 55 6e-07
UniRef50_Q14011 Cluster: Cold-inducible RNA-binding protein; n=6... 55 6e-07
UniRef50_Q7NHK5 Cluster: RNA-binding protein; n=10; cellular org... 54 7e-07
UniRef50_Q8I2Y5 Cluster: RNA-binding protein, putative; n=4; Pla... 54 7e-07
UniRef50_Q7RIJ3 Cluster: RNA recognition motif, putative; n=3; P... 54 7e-07
UniRef50_A0BHN3 Cluster: Chromosome undetermined scaffold_108, w... 54 7e-07
UniRef50_Q0U9M6 Cluster: Putative uncharacterized protein; n=1; ... 54 7e-07
UniRef50_Q01085 Cluster: Nucleolysin TIAR; n=67; Euteleostomi|Re... 54 7e-07
UniRef50_Q5K249 Cluster: Putative glycine-rich RNA-binding prote... 54 1e-06
UniRef50_Q4H2Q6 Cluster: Ci-Tardbp protein; n=1; Ciona intestina... 54 1e-06
UniRef50_A7SUY1 Cluster: Predicted protein; n=1; Nematostella ve... 54 1e-06
UniRef50_Q01L95 Cluster: OSIGBa0137L20.5 protein; n=7; Oryza sat... 54 1e-06
UniRef50_Q5KP68 Cluster: Putative uncharacterized protein; n=3; ... 54 1e-06
UniRef50_Q8N9W6 Cluster: Protein boule-like; n=35; Eumetazoa|Rep... 54 1e-06
UniRef50_Q1LV83 Cluster: Novel protein; n=4; Danio rerio|Rep: No... 53 2e-06
UniRef50_Q5ZAN1 Cluster: Putative uncharacterized protein OSJNBb... 53 2e-06
UniRef50_A7PL41 Cluster: Chromosome chr7 scaffold_20, whole geno... 53 2e-06
UniRef50_A7S6X1 Cluster: Predicted protein; n=1; Nematostella ve... 53 2e-06
UniRef50_P21187 Cluster: Polyadenylate-binding protein (Poly(A)-... 53 2e-06
UniRef50_UPI00006CFFFC Cluster: RNA binding protein; n=1; Tetrah... 53 2e-06
UniRef50_Q569S7 Cluster: LOC443584 protein; n=5; Xenopus|Rep: LO... 53 2e-06
UniRef50_Q94BU4 Cluster: At1g33470/F10C21_14; n=2; Arabidopsis t... 53 2e-06
UniRef50_A7QJF1 Cluster: Chromosome chr8 scaffold_106, whole gen... 53 2e-06
UniRef50_A7PZY6 Cluster: Chromosome chr8 scaffold_41, whole geno... 53 2e-06
UniRef50_A7PG82 Cluster: Chromosome chr6 scaffold_15, whole geno... 53 2e-06
UniRef50_A5BSV4 Cluster: Putative uncharacterized protein; n=1; ... 53 2e-06
UniRef50_UPI0000E806AC Cluster: PREDICTED: hypothetical protein;... 52 3e-06
UniRef50_Q83CD7 Cluster: Nucleic acid binding domain protein; n=... 52 3e-06
UniRef50_Q72SG0 Cluster: Glycine rich RNA-binding protein; n=4; ... 52 3e-06
UniRef50_Q67W00 Cluster: Putative RRM-containing protein; n=2; O... 52 3e-06
UniRef50_UPI00015B48C0 Cluster: PREDICTED: similar to LOC443584 ... 52 4e-06
UniRef50_O25501 Cluster: Ss-DNA binding protein 12RNP2; n=4; Hel... 52 4e-06
UniRef50_Q9LES2 Cluster: Putative uncharacterized protein T8M16_... 52 4e-06
UniRef50_Q5JK61 Cluster: RNA recognition motif (RRM)-containing ... 52 4e-06
UniRef50_Q501B0 Cluster: At2g46780; n=3; core eudicotyledons|Rep... 52 4e-06
UniRef50_A7AWX7 Cluster: RNA recognition motif. (A.k.a. RRM, RBD... 52 4e-06
UniRef50_Q5A297 Cluster: Potential RNA binding protein; n=2; Sac... 52 4e-06
UniRef50_Q03251 Cluster: Glycine-rich RNA-binding protein 8; n=7... 52 4e-06
UniRef50_UPI0000498DFA Cluster: splicing factor; n=2; Entamoeba ... 52 5e-06
UniRef50_Q9SYP9 Cluster: F9H16.14 protein; n=6; core eudicotyled... 52 5e-06
UniRef50_Q8LLE6 Cluster: RNA-binding protein AKIP1; n=7; core eu... 52 5e-06
UniRef50_A7PG81 Cluster: Chromosome chr6 scaffold_15, whole geno... 52 5e-06
UniRef50_A5BIG2 Cluster: Putative uncharacterized protein; n=1; ... 52 5e-06
UniRef50_Q5CSH1 Cluster: Ro ribonucleoprotein-binding protein 1,... 52 5e-06
UniRef50_Q5BXS3 Cluster: SJCHGC01369 protein; n=2; Schistosoma j... 52 5e-06
UniRef50_A7AQD9 Cluster: RNA recognition motif containing protei... 52 5e-06
UniRef50_Q6BQ88 Cluster: Debaryomyces hansenii chromosome E of s... 52 5e-06
UniRef50_UPI0000EB42F3 Cluster: UPI0000EB42F3 related cluster; n... 51 7e-06
UniRef50_A7CQC8 Cluster: RNP-1 like RNA-binding protein; n=1; Op... 51 7e-06
UniRef50_Q9FI08 Cluster: Similarity to RNA-binding protein; n=1;... 51 7e-06
UniRef50_Q8VXC4 Cluster: Glycine rich RNA binding protein; n=20;... 51 7e-06
UniRef50_Q10N14 Cluster: RNA recognition motif family protein, e... 51 7e-06
UniRef50_O24306 Cluster: Ribonucleoprotein; n=3; Pisum sativum|R... 51 7e-06
UniRef50_A7QLH7 Cluster: Chromosome undetermined scaffold_119, w... 51 7e-06
UniRef50_Q95QL3 Cluster: Putative uncharacterized protein; n=2; ... 51 7e-06
UniRef50_Q1JSB7 Cluster: RNA binding protein, putative; n=1; Tox... 51 7e-06
UniRef50_P19684 Cluster: 33 kDa ribonucleoprotein, chloroplast p... 51 7e-06
UniRef50_P49314 Cluster: 31 kDa ribonucleoprotein, chloroplast p... 51 7e-06
UniRef50_Q8T6B9 Cluster: Poly(U)-binding-splicing factor half pi... 51 7e-06
UniRef50_UPI0000E4A54D Cluster: PREDICTED: hypothetical protein;... 51 9e-06
UniRef50_Q4TA11 Cluster: Chromosome undetermined SCAF7478, whole... 51 9e-06
UniRef50_Q2V9B8 Cluster: RNA-binding protein AKIP1-like; n=1; So... 51 9e-06
UniRef50_A7QJZ9 Cluster: Chromosome undetermined scaffold_109, w... 51 9e-06
UniRef50_Q6TMI9 Cluster: RNA-binding protein; n=3; Dictyostelium... 51 9e-06
UniRef50_Q4N6Y8 Cluster: RNA-binding protein, putative; n=2; The... 51 9e-06
UniRef50_Q0KHQ1 Cluster: CG33714-PA, isoform A; n=2; Diptera|Rep... 51 9e-06
UniRef50_O74978 Cluster: Nucleolar RNA-binding protein NIFK; n=1... 51 9e-06
UniRef50_A5DZJ4 Cluster: Putative uncharacterized protein; n=1; ... 51 9e-06
UniRef50_Q9HEQ9 Cluster: Single-stranded TG1-3 DNA-binding prote... 51 9e-06
UniRef50_UPI0000587D6B Cluster: PREDICTED: similar to 2410104I19... 50 1e-05
UniRef50_Q02AB7 Cluster: RNP-1 like RNA-binding protein; n=2; ce... 50 1e-05
UniRef50_Q8GU29 Cluster: Glycin-rich RNA binding protein; n=6; c... 50 1e-05
UniRef50_Q40437 Cluster: RGP-3; n=2; Nicotiana|Rep: RGP-3 - Nico... 50 1e-05
UniRef50_A7QT40 Cluster: Chromosome undetermined scaffold_165, w... 50 1e-05
UniRef50_Q54BM2 Cluster: RNA-binding region-containing protein; ... 50 1e-05
UniRef50_Q6CG61 Cluster: Similar to sp|P31209 Schizosaccharomyce... 50 1e-05
UniRef50_Q1DPW0 Cluster: Putative uncharacterized protein; n=1; ... 50 1e-05
UniRef50_Q43349 Cluster: 29 kDa ribonucleoprotein, chloroplast p... 50 1e-05
UniRef50_Q9WX39 Cluster: Putative RNA-binding protein rbpF; n=10... 50 1e-05
UniRef50_Q9UHX1 Cluster: Poly(U)-binding-splicing factor PUF60 (... 50 1e-05
UniRef50_UPI000049956B Cluster: RNA-binding protein; n=1; Entamo... 50 2e-05
UniRef50_Q4SJ02 Cluster: Chromosome 21 SCAF14577, whole genome s... 50 2e-05
UniRef50_A5KRV2 Cluster: RNP-1 like RNA-binding protein; n=1; ca... 50 2e-05
UniRef50_Q5CRM8 Cluster: T8M16_190-plant like protein with RRM d... 50 2e-05
UniRef50_Q552N9 Cluster: RNA-binding region-containing protein; ... 50 2e-05
UniRef50_Q6ZR81 Cluster: CDNA FLJ46566 fis, clone THYMU3040829, ... 50 2e-05
UniRef50_A1CFG8 Cluster: Pre-mRNA splicing factor (Prp24), putat... 50 2e-05
UniRef50_P53316 Cluster: Uncharacterized RNA-binding protein YGR... 50 2e-05
UniRef50_Q15414 Cluster: RNA-binding motif protein, Y chromosome... 50 2e-05
UniRef50_Q44560 Cluster: Putative RNA-binding protein rbpA; n=4;... 50 2e-05
UniRef50_UPI00015B621E Cluster: PREDICTED: hypothetical protein;... 50 2e-05
UniRef50_Q5PPI5 Cluster: Putative uncharacterized protein; n=1; ... 50 2e-05
UniRef50_P73557 Cluster: RNA-binding protein; n=2; Chroococcales... 50 2e-05
UniRef50_Q8RYD4 Cluster: UBP1 interacting protein 1a; n=5; Arabi... 50 2e-05
UniRef50_Q2HTD6 Cluster: RNA-binding region RNP-1 (RNA recogniti... 50 2e-05
UniRef50_Q10RZ0 Cluster: RNA recognition motif family protein, e... 50 2e-05
UniRef50_A2AX49 Cluster: RNA recognition motif 1; n=1; Guillardi... 50 2e-05
UniRef50_Q9VHP3 Cluster: CG8021-PA; n=3; Diptera|Rep: CG8021-PA ... 50 2e-05
UniRef50_Q9U2F5 Cluster: Putative uncharacterized protein; n=2; ... 50 2e-05
UniRef50_O45189 Cluster: Suppressor protein 12; n=2; Caenorhabdi... 50 2e-05
UniRef50_Q6E3D9 Cluster: FOG-1; n=2; Caenorhabditis|Rep: FOG-1 -... 48 2e-05
UniRef50_Q7ZT82 Cluster: RNA-binding protein; n=2; Danio rerio|R... 49 3e-05
UniRef50_Q3J7I0 Cluster: RNA-binding protein, RNP-1; n=1; Nitros... 49 3e-05
UniRef50_A3J4E6 Cluster: RNA binding protein; n=4; cellular orga... 49 3e-05
UniRef50_A7PIB0 Cluster: Chromosome chr13 scaffold_17, whole gen... 49 3e-05
UniRef50_Q553V5 Cluster: Putative uncharacterized protein; n=4; ... 49 3e-05
UniRef50_Q4XN28 Cluster: RNA binding protein, putative; n=6; Pla... 49 3e-05
UniRef50_A0BZZ4 Cluster: Chromosome undetermined scaffold_14, wh... 49 3e-05
UniRef50_Q59G98 Cluster: TIA1 protein variant; n=5; Euteleostomi... 49 3e-05
UniRef50_Q5KC60 Cluster: Polyadenylation factor 64 kDa subunit, ... 49 3e-05
UniRef50_P53883 Cluster: Nucleolar protein 13; n=5; Saccharomyce... 49 3e-05
UniRef50_UPI00005A129E Cluster: PREDICTED: similar to Heterogene... 49 4e-05
UniRef50_UPI00004996C0 Cluster: RNA-binding protein; n=1; Entamo... 49 4e-05
UniRef50_Q3ED69 Cluster: Uncharacterized protein At1g22910.3; n=... 49 4e-05
UniRef50_Q5BW90 Cluster: SJCHGC05136 protein; n=1; Schistosoma j... 49 4e-05
UniRef50_Q23DH4 Cluster: Putative uncharacterized protein; n=1; ... 49 4e-05
UniRef50_Q5AJS6 Cluster: Multiple RNA-binding domain-containing ... 49 4e-05
UniRef50_UPI0000E45F83 Cluster: PREDICTED: similar to neurotryps... 48 5e-05
UniRef50_UPI0000D578A0 Cluster: PREDICTED: similar to CG12870-PA... 48 5e-05
UniRef50_UPI0000D567E5 Cluster: PREDICTED: similar to CG5422-PB,... 48 5e-05
UniRef50_UPI000065CC4C Cluster: CUG triplet repeat, RNA binding ... 48 5e-05
UniRef50_Q9SIX3 Cluster: Putative glycine-rich RNA-binding prote... 48 5e-05
UniRef50_Q10KP0 Cluster: RNA recognition motif family protein, e... 48 5e-05
UniRef50_A2EV87 Cluster: Putative uncharacterized protein; n=1; ... 48 5e-05
UniRef50_A0E382 Cluster: Chromosome undetermined scaffold_76, wh... 48 5e-05
UniRef50_Q9Y388 Cluster: RNA-binding motif protein, X-linked 2; ... 48 5e-05
UniRef50_Q9H0Z9 Cluster: RNA-binding protein 38; n=16; Eutheria|... 48 5e-05
UniRef50_Q9BX46 Cluster: RNA-binding protein 24; n=52; Eumetazoa... 48 5e-05
UniRef50_UPI0000DB7622 Cluster: PREDICTED: similar to CG3335-PA;... 48 6e-05
UniRef50_UPI0000D9F579 Cluster: PREDICTED: similar to testes-spe... 48 6e-05
UniRef50_Q6VYI5 Cluster: TARDBP S8; n=8; Coelomata|Rep: TARDBP S... 48 6e-05
UniRef50_Q9LIH1 Cluster: Genomic DNA, chromosome 3, P1 clone:MFD... 48 6e-05
UniRef50_Q55D63 Cluster: Putative uncharacterized protein; n=1; ... 48 6e-05
UniRef50_Q54RW5 Cluster: Putative uncharacterized protein; n=1; ... 48 6e-05
UniRef50_Q24847 Cluster: Surface antigen protein; n=3; Entamoeba... 48 6e-05
UniRef50_Q20414 Cluster: Putative uncharacterized protein tag-16... 48 6e-05
UniRef50_O45577 Cluster: Putative uncharacterized protein cpf-2;... 48 6e-05
UniRef50_A6SJV1 Cluster: Putative uncharacterized protein; n=2; ... 48 6e-05
UniRef50_P31483 Cluster: Nucleolysin TIA-1 isoform p40 (RNA-bind... 48 6e-05
UniRef50_UPI0000D5678A Cluster: PREDICTED: similar to CG10466-PA... 48 8e-05
UniRef50_Q3B6Q3 Cluster: RNA-binding region RNP-1; n=6; Chlorobi... 48 8e-05
UniRef50_Q9SJT4 Cluster: Expressed protein; n=1; Arabidopsis tha... 48 8e-05
UniRef50_Q9FZ84 Cluster: F26I16.3 protein; n=2; Arabidopsis thal... 48 8e-05
UniRef50_Q6YWP9 Cluster: RNA recognition motif (RRM)-containing ... 48 8e-05
UniRef50_Q1ECN0 Cluster: At2g27330; n=2; Arabidopsis thaliana|Re... 48 8e-05
UniRef50_A4RZ05 Cluster: Predicted protein; n=1; Ostreococcus lu... 48 8e-05
UniRef50_A3AB12 Cluster: Putative uncharacterized protein; n=1; ... 48 8e-05
UniRef50_Q291D2 Cluster: GA10094-PA; n=1; Drosophila pseudoobscu... 48 8e-05
UniRef50_A7RU25 Cluster: Predicted protein; n=1; Nematostella ve... 48 8e-05
UniRef50_A7AWX8 Cluster: RNA recognition motif. (A.k.a. RRM, RBD... 48 8e-05
UniRef50_A4V6M6 Cluster: Ras-GTPase-activating protein SH3-domai... 48 8e-05
UniRef50_A2FQN0 Cluster: Putative uncharacterized protein; n=1; ... 48 8e-05
UniRef50_Q8SSA1 Cluster: NUCLEOLAR PROTEIN OF THE GAR FAMILY; n=... 48 8e-05
UniRef50_Q4PC17 Cluster: Multiple RNA-binding domain-containing ... 48 8e-05
UniRef50_Q7SG09 Cluster: Multiple RNA-binding domain-containing ... 48 8e-05
UniRef50_Q5RJM0 Cluster: MKI67 FHA domain-interacting nucleolar ... 48 8e-05
UniRef50_Q9SVM8 Cluster: Glycine-rich RNA-binding protein 2, mit... 48 8e-05
UniRef50_UPI0000E476D6 Cluster: PREDICTED: hypothetical protein;... 47 1e-04
UniRef50_UPI0000E468DC Cluster: PREDICTED: hypothetical protein;... 47 1e-04
UniRef50_UPI00005A96C6 Cluster: PREDICTED: similar to Heterogene... 47 1e-04
UniRef50_Q4RX96 Cluster: Chromosome 11 SCAF14979, whole genome s... 47 1e-04
UniRef50_O35698 Cluster: RNA-binding protein; n=7; Mus musculus|... 47 1e-04
UniRef50_A5AUT1 Cluster: Putative uncharacterized protein; n=1; ... 47 1e-04
UniRef50_A2YS16 Cluster: Putative uncharacterized protein; n=3; ... 47 1e-04
UniRef50_Q95QV8 Cluster: Putative uncharacterized protein; n=6; ... 47 1e-04
UniRef50_Q8T772 Cluster: Putative uncharacterized protein; n=1; ... 47 1e-04
UniRef50_Q54ZV8 Cluster: RNA-binding region-containing protein; ... 47 1e-04
UniRef50_Q54NB8 Cluster: RNA-binding region-containing protein; ... 47 1e-04
UniRef50_Q4QI29 Cluster: RNA-binding protein 5, putative; n=3; L... 47 1e-04
UniRef50_A6N9V7 Cluster: RNA binding protein; n=1; Ornithodoros ... 47 1e-04
UniRef50_A0EG16 Cluster: Chromosome undetermined scaffold_94, wh... 47 1e-04
UniRef50_A0EAC5 Cluster: Chromosome undetermined scaffold_86, wh... 47 1e-04
UniRef50_A0BM94 Cluster: Chromosome undetermined scaffold_116, w... 47 1e-04
UniRef50_A1CJX8 Cluster: Glycine-rich RNA-binding protein, putat... 47 1e-04
UniRef50_Q10422 Cluster: Uncharacterized RNA-binding protein C25... 47 1e-04
UniRef50_Q9UNP9 Cluster: Peptidyl-prolyl cis-trans isomerase E; ... 47 1e-04
UniRef50_O13620 Cluster: Multiple RNA-binding domain-containing ... 47 1e-04
UniRef50_Q20870 Cluster: DAZ protein 1; n=5; Caenorhabditis|Rep:... 47 1e-04
UniRef50_UPI0000E495AC Cluster: PREDICTED: hypothetical protein;... 47 1e-04
UniRef50_UPI0000211FC5 Cluster: PREDICTED: RNA binding motif pro... 47 1e-04
UniRef50_A6E971 Cluster: RNA binding protein; n=1; Pedobacter sp... 47 1e-04
UniRef50_Q9FJE9 Cluster: Similarity to RNA binding protein; n=2;... 47 1e-04
UniRef50_Q9FFZ6 Cluster: Similarity to RNA-binding protein; n=2;... 47 1e-04
UniRef50_Q7XGR3 Cluster: RNA recognition motif family protein, e... 47 1e-04
UniRef50_Q10N84 Cluster: RNA-binding protein, putative, expresse... 47 1e-04
UniRef50_Q0ITI7 Cluster: Os11g0250000 protein; n=5; Oryza sativa... 47 1e-04
UniRef50_A7NYH5 Cluster: Chromosome chr6 scaffold_3, whole genom... 47 1e-04
UniRef50_Q9GNI9 Cluster: FOG-1 protein; n=4; Caenorhabditis|Rep:... 47 1e-04
UniRef50_Q8MYR4 Cluster: SD14970p; n=2; Drosophila melanogaster|... 47 1e-04
UniRef50_Q5CYN8 Cluster: Nop15p/nopp34; nucleolar protein with 1... 47 1e-04
UniRef50_Q1HPI4 Cluster: BOULE protein; n=1; Bombyx mori|Rep: BO... 47 1e-04
UniRef50_A3FQ51 Cluster: Cutinase negative acting protein, putat... 47 1e-04
UniRef50_A4QRR2 Cluster: Putative uncharacterized protein; n=1; ... 47 1e-04
UniRef50_Q10355 Cluster: Uncharacterized RNA-binding protein C22... 47 1e-04
UniRef50_UPI00015B552E Cluster: PREDICTED: similar to bruno; n=1... 46 2e-04
UniRef50_UPI0000D5659E Cluster: PREDICTED: similar to CG4760-PB,... 46 2e-04
UniRef50_UPI0000498349 Cluster: RNA-binding protein; n=1; Entamo... 46 2e-04
UniRef50_Q4QRG7 Cluster: Zgc:113884; n=5; Danio rerio|Rep: Zgc:1... 46 2e-04
UniRef50_Q8DIY8 Cluster: RNA binding protein; n=3; Cyanobacteria... 46 2e-04
UniRef50_A6GJJ1 Cluster: Probable nucleic acid-binding protein; ... 46 2e-04
UniRef50_Q9FI04 Cluster: Arabidopsis thaliana genomic DNA, chrom... 46 2e-04
UniRef50_Q01AU2 Cluster: RNA-binding protein SART3; n=1; Ostreoc... 46 2e-04
UniRef50_A7PJ01 Cluster: Chromosome chr13 scaffold_17, whole gen... 46 2e-04
UniRef50_A3BWU4 Cluster: Putative uncharacterized protein; n=3; ... 46 2e-04
UniRef50_A3BDN9 Cluster: Putative uncharacterized protein; n=3; ... 46 2e-04
UniRef50_Q9VT99 Cluster: CG32062-PD, isoform D; n=9; Eumetazoa|R... 46 2e-04
UniRef50_Q93194 Cluster: Putative uncharacterized protein; n=3; ... 46 2e-04
UniRef50_Q5DA36 Cluster: SJCHGC06322 protein; n=3; Bilateria|Rep... 46 2e-04
UniRef50_Q8SRE5 Cluster: CLEAVAGE STIMULATION FACTOR; n=2; Micro... 46 2e-04
UniRef50_Q5A4G6 Cluster: Putative uncharacterized protein PUB1; ... 46 2e-04
UniRef50_Q0TX64 Cluster: Putative uncharacterized protein; n=1; ... 46 2e-04
UniRef50_Q32P59 Cluster: SRA stem-loop-interacting RNA-binding p... 46 2e-04
UniRef50_Q14498 Cluster: RNA-binding protein 39; n=55; Euteleost... 46 2e-04
UniRef50_Q9BYG3 Cluster: MKI67 FHA domain-interacting nucleolar ... 46 2e-04
UniRef50_O04425 Cluster: Flowering time control protein FCA; n=1... 46 2e-04
UniRef50_UPI00015B5DA3 Cluster: PREDICTED: similar to CG3335-PA;... 46 3e-04
UniRef50_UPI0000D9C25F Cluster: PREDICTED: similar to MKI67 (FHA... 46 3e-04
UniRef50_O83375 Cluster: RNA-binding protein, putative; n=1; Tre... 46 3e-04
UniRef50_A6E8T2 Cluster: RNA-binding protein; n=1; Pedobacter sp... 46 3e-04
UniRef50_A0H648 Cluster: RNA-binding region RNP-1; n=3; Chlorofl... 46 3e-04
UniRef50_Q9LKA4 Cluster: Similarity to RNA-binding protein; n=5;... 46 3e-04
UniRef50_Q8W2K5 Cluster: Phragmoplastin-interacting protein PHIP... 46 3e-04
UniRef50_A7QE05 Cluster: Chromosome chr4 scaffold_83, whole geno... 46 3e-04
UniRef50_A7Q8S8 Cluster: Chromosome chr5 scaffold_64, whole geno... 46 3e-04
UniRef50_Q9BLH5 Cluster: HrETR-1 protein; n=7; Chordata|Rep: HrE... 46 3e-04
UniRef50_Q86NL1 Cluster: RE27227p; n=5; Endopterygota|Rep: RE272... 46 3e-04
UniRef50_Q54J52 Cluster: Putative uncharacterized protein; n=1; ... 46 3e-04
UniRef50_Q4UID9 Cluster: Polyadenylate (Poly(A)) binding protein... 46 3e-04
UniRef50_Q22Z94 Cluster: RNA-binding motif protein 8; n=1; Tetra... 46 3e-04
UniRef50_Q1ZXC2 Cluster: RNA-binding region-containing protein; ... 46 3e-04
UniRef50_Q17DU7 Cluster: RNA binding motif protein; n=3; Culicid... 46 3e-04
UniRef50_A2QQZ9 Cluster: Similarity to oligouridylate binding pr... 46 3e-04
UniRef50_Q9NW13 Cluster: RNA-binding protein 28; n=26; Euteleost... 46 3e-04
UniRef50_Q9ZQA8 Cluster: Probable polyadenylate-binding protein ... 46 3e-04
UniRef50_Q05196 Cluster: Polyadenylate-binding protein 5 (Poly(A... 46 3e-04
UniRef50_Q804A9 Cluster: Deleted in azoospermia-like; n=14; Tetr... 46 3e-04
UniRef50_Q24207 Cluster: Protein boule; n=8; Diptera|Rep: Protei... 46 3e-04
UniRef50_UPI0000D577C9 Cluster: PREDICTED: similar to poly(A) bi... 46 3e-04
UniRef50_UPI0000D55A0F Cluster: PREDICTED: similar to CG12058-PA... 46 3e-04
UniRef50_UPI0000EB12A6 Cluster: Deleted in azoospermia-like (DAZ... 46 3e-04
UniRef50_Q4RNX9 Cluster: Peptidyl-prolyl cis-trans isomerase; n=... 46 3e-04
UniRef50_Q5ZYW0 Cluster: RNA binding protein, cold-inducible rrm... 46 3e-04
UniRef50_Q11SF1 Cluster: RNA binding protein; n=6; Bacteria|Rep:... 46 3e-04
UniRef50_A3XSE7 Cluster: RNA-binding protein; n=23; Gammaproteob... 46 3e-04
UniRef50_Q95ZH1 Cluster: RBD protein; n=1; Chironomus tentans|Re... 46 3e-04
UniRef50_Q54QQ7 Cluster: Putative RNA splicing factor; n=1; Dict... 46 3e-04
UniRef50_Q17NF0 Cluster: Putative uncharacterized protein; n=1; ... 46 3e-04
UniRef50_A7RZJ6 Cluster: Predicted protein; n=1; Nematostella ve... 46 3e-04
UniRef50_A7RLV0 Cluster: Predicted protein; n=1; Nematostella ve... 46 3e-04
UniRef50_A7ARL3 Cluster: Polyadenylate binding protein, putative... 46 3e-04
UniRef50_A2EWD1 Cluster: Putative uncharacterized protein; n=1; ... 46 3e-04
UniRef50_A3LV28 Cluster: Predicted protein; n=2; Saccharomycetal... 46 3e-04
UniRef50_A2QVN5 Cluster: Function: RBD; n=2; Pezizomycotina|Rep:... 46 3e-04
UniRef50_P82277 Cluster: Plastid-specific 30S ribosomal protein ... 46 3e-04
UniRef50_P19683 Cluster: 31 kDa ribonucleoprotein, chloroplast p... 46 3e-04
UniRef50_UPI0000D57226 Cluster: PREDICTED: similar to CG10868-PA... 45 5e-04
UniRef50_Q6NWB3 Cluster: Splicing factor 3b, subunit 4; n=16; Eu... 45 5e-04
UniRef50_Q05C33 Cluster: Tardbp protein; n=14; Coelomata|Rep: Ta... 45 5e-04
UniRef50_Q7U7Q8 Cluster: PutativeRNA-binding protein RbpD; n=9; ... 45 5e-04
UniRef50_Q5EUH9 Cluster: Putative uncharacterized protein; n=1; ... 45 5e-04
UniRef50_Q9LJL7 Cluster: DNA/RNA binding protein-like; n=13; cor... 45 5e-04
UniRef50_Q9FND0 Cluster: Gb|AAD20086.1; n=3; rosids|Rep: Gb|AAD2... 45 5e-04
UniRef50_Q6ZLD1 Cluster: Putative RRM RNA binding protein NSAP1;... 45 5e-04
UniRef50_Q1PES4 Cluster: RNA recognition motif-containing protei... 45 5e-04
UniRef50_Q109W0 Cluster: RNA recognition motif family protein, e... 45 5e-04
UniRef50_A2WN71 Cluster: Putative uncharacterized protein; n=2; ... 45 5e-04
UniRef50_Q6X9Z2 Cluster: HnRNP core protein A1; n=2; Laurasiathe... 45 5e-04
UniRef50_Q7Q427 Cluster: ENSANGP00000006836; n=1; Anopheles gamb... 45 5e-04
UniRef50_A7ARN5 Cluster: Ser/Arg-rich splicing factor, putative;... 45 5e-04
UniRef50_A0CBK1 Cluster: Chromosome undetermined scaffold_164, w... 45 5e-04
UniRef50_Q6MVP3 Cluster: Related to heterogeneous nuclear ribonu... 45 5e-04
UniRef50_Q5KHU8 Cluster: MRNA catabolism, nonsense-mediated-rela... 45 5e-04
UniRef50_A5E689 Cluster: Putative uncharacterized protein; n=1; ... 45 5e-04
UniRef50_P19018 Cluster: Transformer-2 sex-determining protein; ... 45 5e-04
UniRef50_Q15427 Cluster: Splicing factor 3B subunit 4; n=37; Euk... 45 5e-04
UniRef50_Q44554 Cluster: Putative RNA-binding protein rbpB; n=41... 45 5e-04
UniRef50_Q57014 Cluster: Putative RNA-binding protein rbpA; n=70... 45 5e-04
UniRef50_Q9Y4C8 Cluster: Probable RNA-binding protein 19; n=30; ... 45 5e-04
UniRef50_Q4WJT7 Cluster: Multiple RNA-binding domain-containing ... 45 5e-04
UniRef50_Q6DRI6 Cluster: KIAA0682-like; n=7; Danio rerio|Rep: KI... 45 6e-04
UniRef50_Q9SX80 Cluster: F16N3.23 protein; n=12; Magnoliophyta|R... 45 6e-04
UniRef50_Q5VNP2 Cluster: DNA repair helicase ERCC6-like; n=8; Or... 45 6e-04
UniRef50_O64571 Cluster: Putative RNA-binding protein; n=3; Arab... 45 6e-04
UniRef50_A7RRY1 Cluster: Predicted protein; n=1; Nematostella ve... 45 6e-04
UniRef50_A0NDC4 Cluster: ENSANGP00000031931; n=5; Eumetazoa|Rep:... 45 6e-04
UniRef50_A0EH21 Cluster: Chromosome undetermined scaffold_96, wh... 45 6e-04
UniRef50_A0E769 Cluster: Chromosome undetermined scaffold_80, wh... 45 6e-04
UniRef50_Q5KJW8 Cluster: RNA binding protein, putative; n=2; Fil... 45 6e-04
UniRef50_O94290 Cluster: RNA-binding protein Cwf29; n=1; Schizos... 45 6e-04
UniRef50_Q03250 Cluster: Glycine-rich RNA-binding protein 7; n=1... 45 6e-04
UniRef50_UPI0000DB7A71 Cluster: PREDICTED: similar to boule CG47... 44 8e-04
UniRef50_UPI00006CFBAA Cluster: heterogeneous nuclear ribonucleo... 44 8e-04
UniRef50_UPI00006CFA08 Cluster: hypothetical protein TTHERM_0042... 44 8e-04
UniRef50_UPI000065F2DF Cluster: Homolog of Homo sapiens "Splice ... 44 8e-04
UniRef50_Q1IV44 Cluster: RNA-binding protein, RNP-1; n=2; Bacter... 44 8e-04
UniRef50_Q9ZVW9 Cluster: Putative splicing factor; n=3; Arabidop... 44 8e-04
UniRef50_Q9SJ28 Cluster: Putative glycine-rich RNA binding prote... 44 8e-04
UniRef50_Q7XAN8 Cluster: Putative CUG triplet repeat RNA-binding... 44 8e-04
UniRef50_A4S1N4 Cluster: Predicted protein; n=2; Ostreococcus|Re... 44 8e-04
UniRef50_A4S0L2 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 44 8e-04
UniRef50_A3QQP3 Cluster: Chloroplast single strand DNA binding p... 44 8e-04
UniRef50_A3AAN7 Cluster: Putative uncharacterized protein; n=2; ... 44 8e-04
UniRef50_A2YPM7 Cluster: Putative uncharacterized protein; n=3; ... 44 8e-04
UniRef50_Q8IMX4 Cluster: CG5422-PD, isoform D; n=14; Endopterygo... 44 8e-04
UniRef50_Q70TB2 Cluster: Transformer-2 protein; n=1; Bactrocera ... 44 8e-04
UniRef50_Q54PB2 Cluster: RNA-binding region-containing protein; ... 44 8e-04
UniRef50_Q4CRD0 Cluster: RNA-binding protein, putative; n=8; Try... 44 8e-04
UniRef50_Q17I92 Cluster: Cytoplasmic polyadenylation element bin... 44 8e-04
UniRef50_A2A2V2 Cluster: Novel protein; n=2; Mammalia|Rep: Novel... 44 8e-04
UniRef50_Q2UM65 Cluster: RNA-binding proteins; n=7; Eurotiomycet... 44 8e-04
UniRef50_A7TPL8 Cluster: Putative uncharacterized protein; n=1; ... 44 8e-04
UniRef50_A5DJP2 Cluster: Putative uncharacterized protein; n=1; ... 44 8e-04
UniRef50_P40561 Cluster: RNA-binding protein SGN1; n=2; Saccharo... 44 8e-04
UniRef50_P42696 Cluster: RNA-binding protein 34; n=44; Tetrapoda... 44 8e-04
UniRef50_Q13310 Cluster: Polyadenylate-binding protein 4 (Poly(A... 44 8e-04
UniRef50_UPI0000E49171 Cluster: PREDICTED: hypothetical protein;... 44 0.001
UniRef50_UPI0000DB7056 Cluster: PREDICTED: similar to RNA bindin... 44 0.001
UniRef50_Q4RSY1 Cluster: Chromosome 12 SCAF14999, whole genome s... 44 0.001
UniRef50_Q9C5A7 Cluster: Putative uncharacterized protein At5g08... 44 0.001
UniRef50_Q8LFQ5 Cluster: RNA binding protein-like; n=4; Arabidop... 44 0.001
UniRef50_Q84ZS8 Cluster: Putative uncharacterized protein OJ1127... 44 0.001
UniRef50_Q6XJQ7 Cluster: FCA protein; n=86; BEP clade|Rep: FCA p... 44 0.001
UniRef50_Q1PEP5 Cluster: Nucleolin; n=2; Arabidopsis thaliana|Re... 44 0.001
UniRef50_A7PXT7 Cluster: Chromosome chr15 scaffold_37, whole gen... 44 0.001
UniRef50_A2YQN8 Cluster: Putative uncharacterized protein; n=4; ... 44 0.001
UniRef50_Q1ECA2 Cluster: IP09238p; n=10; Coelomata|Rep: IP09238p... 44 0.001
UniRef50_A7AQF7 Cluster: RNA recognition motif (RRM)-containing ... 44 0.001
UniRef50_Q5KBA9 Cluster: Putative uncharacterized protein; n=1; ... 44 0.001
UniRef50_P62995 Cluster: Splicing factor, arginine/serine-rich 1... 44 0.001
UniRef50_Q04836 Cluster: 31 kDa ribonucleoprotein, chloroplast p... 44 0.001
UniRef50_Q00539 Cluster: Protein NAM8; n=2; Saccharomyces cerevi... 44 0.001
UniRef50_Q19706 Cluster: Probable eukaryotic translation initiat... 44 0.001
UniRef50_UPI0000E4857E Cluster: PREDICTED: similar to cold induc... 44 0.001
UniRef50_UPI0000D9F28C Cluster: PREDICTED: similar to poly(A)bin... 44 0.001
UniRef50_UPI000051A0F5 Cluster: PREDICTED: similar to Cleavage s... 44 0.001
UniRef50_UPI0000498AD7 Cluster: enhancer binding protein 2; n=1;... 44 0.001
UniRef50_Q4RJP2 Cluster: Chromosome 13 SCAF15035, whole genome s... 44 0.001
UniRef50_Q4KLD9 Cluster: MGC116464 protein; n=1; Xenopus laevis|... 44 0.001
UniRef50_Q6ID29 Cluster: At4g13860; n=9; cellular organisms|Rep:... 44 0.001
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 44 0.001
UniRef50_Q4YUU2 Cluster: Cyclophilin, putative; n=4; Plasmodium|... 44 0.001
UniRef50_Q245K5 Cluster: Putative uncharacterized protein; n=1; ... 44 0.001
UniRef50_A7ST95 Cluster: Predicted protein; n=1; Nematostella ve... 44 0.001
UniRef50_A7AN88 Cluster: RNA recognition motif domain containing... 44 0.001
UniRef50_A2E6S8 Cluster: RNA-binding protein, putative; n=2; Tri... 44 0.001
UniRef50_A2DHF2 Cluster: Putative uncharacterized protein; n=2; ... 44 0.001
UniRef50_Q6FSA7 Cluster: Candida glabrata strain CBS138 chromoso... 44 0.001
UniRef50_Q6CQW2 Cluster: Similarities with sp|Q8J1F4 Ashbya goss... 44 0.001
UniRef50_Q6CA89 Cluster: Yarrowia lipolytica chromosome D of str... 44 0.001
UniRef50_Q4PBV1 Cluster: Putative uncharacterized protein; n=1; ... 44 0.001
UniRef50_Q00880 Cluster: Cutinase negative acting protein; n=2; ... 44 0.001
UniRef50_A3LSC1 Cluster: Predicted protein; n=2; Saccharomycetal... 44 0.001
UniRef50_UPI00015B513E Cluster: PREDICTED: similar to ENSANGP000... 43 0.002
UniRef50_UPI0000519D22 Cluster: PREDICTED: similar to oo18 RNA-b... 43 0.002
UniRef50_Q0EVV9 Cluster: RNA-binding protein; n=1; Mariprofundus... 43 0.002
UniRef50_Q9FX88 Cluster: Putative RNA binding protein; n=1; Arab... 43 0.002
UniRef50_Q18724 Cluster: Putative uncharacterized protein; n=2; ... 43 0.002
UniRef50_Q18318 Cluster: Putative uncharacterized protein C30B5.... 43 0.002
UniRef50_Q6BT88 Cluster: Similar to CA1953|IPF3899 Candida albic... 43 0.002
UniRef50_Q5B8Q8 Cluster: Putative uncharacterized protein; n=1; ... 43 0.002
UniRef50_Q2UQ21 Cluster: Predicted protein; n=3; Pezizomycotina|... 43 0.002
UniRef50_A6RA95 Cluster: Putative uncharacterized protein; n=1; ... 43 0.002
UniRef50_Q2GSX8 Cluster: Polyadenylate-binding protein, cytoplas... 43 0.002
UniRef50_Q08208 Cluster: Nucleolar protein 12; n=5; Saccharomyce... 43 0.002
UniRef50_Q8JIY8 Cluster: MKI67 FHA domain-interacting nucleolar ... 43 0.002
UniRef50_Q0F212 Cluster: RNA-binding region RNP-1; n=1; Mariprof... 43 0.002
UniRef50_A6VVI5 Cluster: RNP-1 like RNA-binding protein; n=3; Ga... 43 0.002
UniRef50_Q0WRA3 Cluster: AtE1; n=8; Magnoliophyta|Rep: AtE1 - Ar... 43 0.002
UniRef50_Q9VDI8 Cluster: CG17838-PD, isoform D; n=11; Endopteryg... 43 0.002
UniRef50_Q9VCN7 Cluster: CG10868-PA, isoform A; n=7; Sophophora|... 43 0.002
UniRef50_Q4N6G9 Cluster: RNA-binding protein, putative; n=2; The... 43 0.002
UniRef50_Q1ZXF8 Cluster: RNA-binding region-containing protein; ... 43 0.002
UniRef50_Q17430 Cluster: Putative uncharacterized protein; n=2; ... 43 0.002
UniRef50_Q16N17 Cluster: Putative uncharacterized protein; n=1; ... 43 0.002
UniRef50_Q0E8R3 Cluster: CG31761-PE, isoform E; n=7; Coelomata|R... 43 0.002
UniRef50_A7SSV8 Cluster: Predicted protein; n=1; Nematostella ve... 43 0.002
UniRef50_A0CCB3 Cluster: Chromosome undetermined scaffold_167, w... 43 0.002
>UniRef50_Q08473 Cluster: RNA-binding protein squid; n=22;
Endopterygota|Rep: RNA-binding protein squid -
Drosophila melanogaster (Fruit fly)
Length = 344
Score = 203 bits (496), Expect = 8e-52
Identities = 94/120 (78%), Positives = 107/120 (89%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFF 180
RGFAFIVF E+IDKV AA EH IN+KKVDPKKAKARHGKIFVGGL++EISD+EI+ +F
Sbjct: 97 RGFAFIVFTNTEAIDKVSAADEHIINSKKVDPKKAKARHGKIFVGGLTTEISDEEIKTYF 156
Query: 181 SEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 360
+FG I+EVEMPFDK K+QRKGFCFITF+SEQVV DLLKTPK+ I GKEVDVKRATPKP+
Sbjct: 157 GQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPE 216
Score = 57.2 bits (132), Expect = 1e-07
Identities = 25/75 (33%), Positives = 44/75 (58%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+FVGGLS E ++ E+R+ F ++G I + + D + +GF FI F + + ++ +
Sbjct: 57 KLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAA 116
Query: 301 PKRTIGGKEVDVKRA 345
+ I K+VD K+A
Sbjct: 117 DEHIINSKKVDPKKA 131
>UniRef50_UPI0000DB6DF2 Cluster: PREDICTED: similar to squid
CG16901-PC, isoform C; n=2; Apocrita|Rep: PREDICTED:
similar to squid CG16901-PC, isoform C - Apis mellifera
Length = 320
Score = 173 bits (422), Expect = 8e-43
Identities = 77/122 (63%), Positives = 102/122 (83%), Gaps = 2/122 (1%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA--KARHGKIFVGGLSSEISDDEIRN 174
RGFAF+VF P++IDK++A+GEH IN +KVDPK+ K +HGKIFVGGL+ EI+D++I+
Sbjct: 100 RGFAFMVFTNPKTIDKLLASGEHYINKRKVDPKRVSKKPQHGKIFVGGLTPEITDEDIKT 159
Query: 175 FFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 354
+F ++GTI+E++ PFDK KNQRKGFCFITF+S++VV LLKTPK+TI GKEVDVK+
Sbjct: 160 YFGQYGTIVELQAPFDKVKNQRKGFCFITFDSKEVVYKLLKTPKQTINGKEVDVKKVKVN 219
Query: 355 PD 360
PD
Sbjct: 220 PD 221
Score = 63.3 bits (147), Expect = 2e-09
Identities = 29/79 (36%), Positives = 47/79 (59%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+FVGGLS +D E+R+ FS+FG I + + D +GF F+ F + + ++ LL +
Sbjct: 60 KLFVGGLSRNTTDKELRDHFSKFGEIESISVKIDPYTGISRGFAFMVFTNPKTIDKLLAS 119
Query: 301 PKRTIGGKEVDVKRATPKP 357
+ I ++VD KR + KP
Sbjct: 120 GEHYINKRKVDPKRVSKKP 138
>UniRef50_O14979 Cluster: Heterogeneous nuclear ribonucleoprotein
D-like; n=24; Mammalia|Rep: Heterogeneous nuclear
ribonucleoprotein D-like - Homo sapiens (Human)
Length = 420
Score = 117 bits (282), Expect = 7e-26
Identities = 54/123 (43%), Positives = 80/123 (65%), Gaps = 5/123 (4%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK-----IFVGGLSSEISDDE 165
RGF F++FK S+DKV+ EH ++ K +DPK+AKA GK +FVGGLS + S+++
Sbjct: 189 RGFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPKKVFVGGLSPDTSEEQ 248
Query: 166 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 345
I+ +F FG I +E+P D N+R+GFCFIT+ E+ V LL++ IG + ++K A
Sbjct: 249 IKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIKVA 308
Query: 346 TPK 354
PK
Sbjct: 309 QPK 311
Score = 59.7 bits (138), Expect = 2e-08
Identities = 27/94 (28%), Positives = 50/94 (53%)
Frame = +1
Query: 64 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRK 243
E K++ K + GK+F+GGLS + S ++ + S FG +++ + D + +
Sbjct: 130 EEFAEGSKINASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSR 189
Query: 244 GFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 345
GF F+ F+ V+ +L+ + + GK +D KRA
Sbjct: 190 GFGFVLFKDAASVDKVLELKEHKLDGKLIDPKRA 223
>UniRef50_Q14103 Cluster: Heterogeneous nuclear ribonucleoprotein
D0; n=123; Deuterostomia|Rep: Heterogeneous nuclear
ribonucleoprotein D0 - Homo sapiens (Human)
Length = 355
Score = 114 bits (275), Expect = 5e-25
Identities = 53/123 (43%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK-----IFVGGLSSEISDDE 165
RGF F++FK ES+DKVM EH +N K +DPK+AKA K IFVGGLS + +++
Sbjct: 138 RGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVKKIFVGGLSPDTPEEK 197
Query: 166 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 345
IR +F FG + +E+P D N+R+GFCFITF+ E+ V +++ +G + ++K A
Sbjct: 198 IREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVA 257
Query: 346 TPK 354
K
Sbjct: 258 MSK 260
Score = 58.8 bits (136), Expect = 3e-08
Identities = 23/81 (28%), Positives = 49/81 (60%)
Frame = +1
Query: 103 AKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVV 282
A+ K+F+GGLS + + +++++FS+FG +++ + D + +GF F+ F+ + V
Sbjct: 92 AQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESV 151
Query: 283 NDLLKTPKRTIGGKEVDVKRA 345
+ ++ + + GK +D KRA
Sbjct: 152 DKVMDQKEHKLNGKVIDPKRA 172
>UniRef50_A4V6K2 Cluster: PRM10 protein; n=1; Dugesia japonica|Rep:
PRM10 protein - Dugesia japonica (Planarian)
Length = 325
Score = 109 bits (262), Expect = 2e-23
Identities = 47/121 (38%), Positives = 79/121 (65%), Gaps = 3/121 (2%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR---HGKIFVGGLSSEISDDEIR 171
RGF F+ +S+ KV+ EH + NKK+DPK AK + KIFVGGLS E+++++I+
Sbjct: 113 RGFGFVTMDTEDSLKKVLEVPEHRLKNKKIDPKPAKPTKEPNKKIFVGGLSPEVTEEQIK 172
Query: 172 NFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATP 351
+FS++G++ V++PFD +K +RK + F++F +E + + K+ + G + DV+ A P
Sbjct: 173 EYFSQYGSVESVDLPFDTSKGKRKPYVFLSFTTEDAAKNAIINEKQDVLGSKCDVRMAVP 232
Query: 352 K 354
K
Sbjct: 233 K 233
Score = 63.7 bits (148), Expect = 1e-09
Identities = 29/94 (30%), Positives = 55/94 (58%)
Frame = +1
Query: 70 TINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGF 249
+INNK + ++ K+FVGGLS E ++++++N+F +G + + DK +GF
Sbjct: 60 SINNKVDEDDDSR----KLFVGGLSWETTEEDLKNYFETWGKVAHCVIKLDKMTGNSRGF 115
Query: 250 CFITFESEQVVNDLLKTPKRTIGGKEVDVKRATP 351
F+T ++E + +L+ P+ + K++D K A P
Sbjct: 116 GFVTMDTEDSLKKVLEVPEHRLKNKKIDPKPAKP 149
>UniRef50_O94432 Cluster: mRNA cleavage factor complex subunit; n=1;
Schizosaccharomyces pombe|Rep: mRNA cleavage factor
complex subunit - Schizosaccharomyces pombe (Fission
yeast)
Length = 474
Score = 109 bits (262), Expect = 2e-23
Identities = 52/123 (42%), Positives = 80/123 (65%), Gaps = 5/123 (4%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVGGLSSEISDDE 165
RGF F+ FK P+ +++VM+ EH ++ K +DPK+A R K+FVGG+ + +++E
Sbjct: 204 RGFGFLTFKNPKCVNEVMSK-EHHLDGKIIDPKRAIPREEQEKTAKMFVGGVPGDCTEEE 262
Query: 166 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 345
RNFF++FG +L+ + DK + +GF F+T+E+E V + P TI GK V+VKRA
Sbjct: 263 FRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAVEATMSQPYITIHGKPVEVKRA 322
Query: 346 TPK 354
TPK
Sbjct: 323 TPK 325
Score = 71.7 bits (168), Expect = 5e-12
Identities = 30/81 (37%), Positives = 56/81 (69%)
Frame = +1
Query: 118 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 297
GK+F+GGL+ E +DD +R++F +FG +L+ + D T + +GF F+TF++ + VN+++
Sbjct: 163 GKMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVM- 221
Query: 298 TPKRTIGGKEVDVKRATPKPD 360
+ + + GK +D KRA P+ +
Sbjct: 222 SKEHHLDGKIIDPKRAIPREE 242
>UniRef50_UPI0000DB6D53 Cluster: PREDICTED: similar to CG32169-PA
isoform 2; n=1; Apis mellifera|Rep: PREDICTED: similar
to CG32169-PA isoform 2 - Apis mellifera
Length = 426
Score = 107 bits (256), Expect = 1e-22
Identities = 53/127 (41%), Positives = 78/127 (61%), Gaps = 9/127 (7%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK---------KAKARHGKIFVGGLSSEI 153
+GF FI F P S+DKV+A G H ++ KK+DPK K R KIFVGGLS+
Sbjct: 139 KGFGFITFADPASVDKVLAQGNHELDGKKIDPKVAFPRRTHPKMVTRTKKIFVGGLSAPT 198
Query: 154 SDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVD 333
+ ++++N+F +FG I + + FDK N+ +GF F+TF+SE VV+ + + I K V+
Sbjct: 199 TLEDVKNYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVE 258
Query: 334 VKRATPK 354
K+A PK
Sbjct: 259 CKKAQPK 265
>UniRef50_Q4W5P0 Cluster: Homologous to drosophila sqd (Squid)
protein protein 1, isoform b; n=3; Caenorhabditis|Rep:
Homologous to drosophila sqd (Squid) protein protein 1,
isoform b - Caenorhabditis elegans
Length = 308
Score = 107 bits (256), Expect = 1e-22
Identities = 51/119 (42%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK-IFVGGLSSEISDDEIRNF 177
RGFAF+ F E +AA E TI K V+ K AK+R K +FVGGL S+ S+ ++R+
Sbjct: 70 RGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENKKVFVGGLPSDYSEQDLRSH 129
Query: 178 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 354
F +FG + ++E PFDK R+ F FI FE E+ + K+T G +E DVK+A P+
Sbjct: 130 FEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQ 188
Score = 63.3 bits (147), Expect = 2e-09
Identities = 25/75 (33%), Positives = 50/75 (66%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KIFVGG+S E++++++ + F+++G + + ++ +D+T + +GF F+ F + + L
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 301 PKRTIGGKEVDVKRA 345
++TI GK V+VK A
Sbjct: 90 REQTIKGKSVEVKPA 104
>UniRef50_Q6PNM9 Cluster: AUF1 similar protein; n=3; Paracentrotus
lividus|Rep: AUF1 similar protein - Paracentrotus
lividus (Common sea urchin)
Length = 361
Score = 106 bits (254), Expect = 2e-22
Identities = 47/125 (37%), Positives = 78/125 (62%), Gaps = 5/125 (4%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKA-----RHGKIFVGGLSSEISDDE 165
RGF FI+F++ +S+ KV+ EH +++K +DPK A + KIF+GG+ S++ DD+
Sbjct: 91 RGFGFILFESADSVTKVLDVPEHKVDDKTIDPKPANPLKKPEKKKKIFIGGIGSDLKDDD 150
Query: 166 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 345
I+++FS+FGT++E E P DKT +R GF F+ +E+ + TI K+V+V A
Sbjct: 151 IKSYFSQFGTVVETEFPEDKTTGRRLGFAFVKYETSDEAQKAQNSRFHTISNKKVEVSEA 210
Query: 346 TPKPD 360
+ +
Sbjct: 211 VSREE 215
Score = 61.7 bits (143), Expect = 5e-09
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Frame = +1
Query: 82 KKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFIT 261
+++ K + K+FVGGL+ + + ++ +FS +GT+ + E+ D+ + +GF FI
Sbjct: 38 ERIYASKEQEDDKKLFVGGLAWNTTPETLQQYFSAYGTVQDCEIKKDQVTKKPRGFGFIL 97
Query: 262 FESEQVVNDLLKTPKRTIGGKEVDVKRATP--KPD 360
FES V +L P+ + K +D K A P KP+
Sbjct: 98 FESADSVTKVLDVPEHKVDDKTIDPKPANPLKKPE 132
>UniRef50_Q5DH48 Cluster: SJCHGC06087 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06087 protein - Schistosoma
japonicum (Blood fluke)
Length = 390
Score = 105 bits (252), Expect = 3e-22
Identities = 44/121 (36%), Positives = 76/121 (62%), Gaps = 3/121 (2%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---KIFVGGLSSEISDDEIR 171
RGF F+ ++ + + KV++ EH + NKK+DPKKAK KIFVGG+ E+++D+IR
Sbjct: 100 RGFGFVTLESEDCVSKVLSVSEHWLKNKKIDPKKAKPSREPLRKIFVGGIDPEVTEDQIR 159
Query: 172 NFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATP 351
+FS FG + +++P+D K +RK + F++F +E + ++ I G++ DV+ A
Sbjct: 160 EYFSSFGKVESLDLPYDTQKGKRKHYIFVSFSTEAAARKAISKERQEIFGRQCDVRVAVT 219
Query: 352 K 354
+
Sbjct: 220 R 220
Score = 62.5 bits (145), Expect = 3e-09
Identities = 26/77 (33%), Positives = 47/77 (61%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+FVGGLS E ++ +++ +FS +G + + + D+ +GF F+T ESE V+ +L
Sbjct: 60 KLFVGGLSWETNESDLKEYFSRWGKVTQCIIKLDRFTGNSRGFGFVTLESEDCVSKVLSV 119
Query: 301 PKRTIGGKEVDVKRATP 351
+ + K++D K+A P
Sbjct: 120 SEHWLKNKKIDPKKAKP 136
>UniRef50_Q9VVE5 Cluster: CG32169-PA; n=9; Endopterygota|Rep:
CG32169-PA - Drosophila melanogaster (Fruit fly)
Length = 369
Score = 105 bits (251), Expect = 4e-22
Identities = 52/127 (40%), Positives = 77/127 (60%), Gaps = 9/127 (7%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------KIFVGGLSSEI 153
RGF F+ F P S+DKV+ G H ++ KKVDPK A R KIFVGGLS+
Sbjct: 70 RGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPT 129
Query: 154 SDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVD 333
+ ++++++F +FG I + + FDK N+ +GF F+TF+SE VV+ + + I K V+
Sbjct: 130 TLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVE 189
Query: 334 VKRATPK 354
K+A PK
Sbjct: 190 CKKAQPK 196
Score = 62.5 bits (145), Expect = 3e-09
Identities = 30/87 (34%), Positives = 48/87 (55%)
Frame = +1
Query: 94 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 273
P + GK+F+GGLS + S + +R++F +G I E + D T + +GF F+TF
Sbjct: 21 PSEVPNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDP 80
Query: 274 QVVNDLLKTPKRTIGGKEVDVKRATPK 354
V+ +L + GK+VD K A P+
Sbjct: 81 NSVDKVLTQGTHELDGKKVDPKVAFPR 107
>UniRef50_A3LZT4 Cluster: Predicted protein; n=1; Pichia
stipitis|Rep: Predicted protein - Pichia stipitis
(Yeast)
Length = 481
Score = 104 bits (249), Expect = 7e-22
Identities = 49/123 (39%), Positives = 80/123 (65%), Gaps = 5/123 (4%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVGGLSSEISDDE 165
RGF F+ F+ P+S+D+V+ +H ++ K +DPK+A AR GKIFVGG+ +++ E
Sbjct: 201 RGFGFLTFRDPKSVDEVIKT-DHILDGKLIDPKRAIAREEQDKVGKIFVGGIDPMVNEKE 259
Query: 166 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 345
+FFS+FG+I++ ++ DK + +GF FITF+S V+ + T+ GK ++VKRA
Sbjct: 260 FHDFFSQFGSIIDAQLMIDKDSGRSRGFGFITFDSPDAVDRVTVNKFLTLKGKAMEVKRA 319
Query: 346 TPK 354
P+
Sbjct: 320 EPR 322
Score = 58.8 bits (136), Expect = 3e-08
Identities = 26/89 (29%), Positives = 53/89 (59%)
Frame = +1
Query: 94 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 273
P GK+F+GGL+ + +++ + ++FS+FG +++ + D + +GF F+TF
Sbjct: 152 PSSMGRETGKMFIGGLNWDTTEEGLVSYFSKFGEVVDYTIMKDNNTGKSRGFGFLTFRDP 211
Query: 274 QVVNDLLKTPKRTIGGKEVDVKRATPKPD 360
+ V++++KT + GK +D KRA + +
Sbjct: 212 KSVDEVIKT-DHILDGKLIDPKRAIAREE 239
>UniRef50_Q6CC04 Cluster: Yarrowia lipolytica chromosome C of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome C of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 367
Score = 103 bits (247), Expect = 1e-21
Identities = 46/120 (38%), Positives = 79/120 (65%), Gaps = 5/120 (4%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVGGLSSEISDDE 165
RGF F+ F+ P+ ++ VMA EH ++ K +DPK+A R KIFVGG+ S++++++
Sbjct: 40 RGFGFLTFRDPKCVNAVMAK-EHYLDGKIIDPKRAIPREEQDKTSKIFVGGVGSDVTEED 98
Query: 166 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 345
+ FF ++GT+++ ++ DK + +GF F+TF+SEQ +N +L P + K ++VKRA
Sbjct: 99 YKQFFEQYGTVIDAQLMIDKDSGRPRGFGFVTFDSEQAMNTILAQPLLILKDKPIEVKRA 158
Score = 61.3 bits (142), Expect = 6e-09
Identities = 27/79 (34%), Positives = 49/79 (62%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 303
+F+GGL+ E +D+ + N+F++FG +LE + D + +GF F+TF + VN ++
Sbjct: 1 MFIGGLNWETTDESLTNYFAQFGEVLECTVMRDHFSGKSRGFGFLTFRDPKCVNAVM-AK 59
Query: 304 KRTIGGKEVDVKRATPKPD 360
+ + GK +D KRA P+ +
Sbjct: 60 EHYLDGKIIDPKRAIPREE 78
>UniRef50_Q6BL35 Cluster: Debaryomyces hansenii chromosome F of
strain CBS767 of Debaryomyces hansenii; n=4;
Saccharomycetales|Rep: Debaryomyces hansenii chromosome
F of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 495
Score = 103 bits (247), Expect = 1e-21
Identities = 48/123 (39%), Positives = 80/123 (65%), Gaps = 5/123 (4%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVGGLSSEISDDE 165
RGF F+ FK P+S+D+V+ +H ++ K +DPK+A AR GKIFVGG+ +++ +
Sbjct: 211 RGFGFLTFKDPKSVDEVIKT-DHILDGKLIDPKRAIAREEQDKVGKIFVGGIDPMVNEKD 269
Query: 166 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 345
+FFS+FG+I++ ++ DK + +GF FIT++S V+ + T+ GK ++VKRA
Sbjct: 270 FNDFFSQFGSIIDAQLMIDKDTGRSRGFGFITYDSPDAVDRVTVNKYLTLKGKSMEVKRA 329
Query: 346 TPK 354
P+
Sbjct: 330 EPR 332
Score = 59.3 bits (137), Expect = 3e-08
Identities = 25/93 (26%), Positives = 56/93 (60%)
Frame = +1
Query: 82 KKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFIT 261
+++ P HGK+F+GGL+ + ++ + +F+++G +++ + D + +GF F+T
Sbjct: 158 QQLPPSNMGKDHGKMFIGGLNWDTTEQGLVEYFTKYGEVIDHTIMRDNNTGKSRGFGFLT 217
Query: 262 FESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 360
F+ + V++++KT + GK +D KRA + +
Sbjct: 218 FKDPKSVDEVIKT-DHILDGKLIDPKRAIAREE 249
>UniRef50_UPI0001560FCC Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 501
Score = 103 bits (246), Expect = 2e-21
Identities = 47/123 (38%), Positives = 77/123 (62%), Gaps = 5/123 (4%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----KIFVGGLSSEISDDE 165
RGF F++FK +++KV+ EH ++ K + ++AKA K+FVGGL+ +S+++
Sbjct: 137 RGFGFVLFKDSATVEKVLQVKEHKLDGKTIQLRRAKAVVSRFPPKKVFVGGLNPRLSEEK 196
Query: 166 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 345
IR +F FG I ++++P + N+R+ FCFIT+ E+ V LL+T IG + +VK A
Sbjct: 197 IRQYFGTFGVIQDIKLPVNSKTNERRAFCFITYADEKAVRKLLETRYHRIGSRRCEVKIA 256
Query: 346 TPK 354
PK
Sbjct: 257 FPK 259
Score = 50.0 bits (114), Expect = 2e-05
Identities = 20/87 (22%), Positives = 46/87 (52%)
Frame = +1
Query: 85 KVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 264
+++ + + K+F+GGLS +S + ++ S+FG +++ + +GF F+ F
Sbjct: 85 RIEATRNQQDGSKMFIGGLSGNVSKQGLLDYLSQFGEVVDFIIKIHPGTGLSRGFGFVLF 144
Query: 265 ESEQVVNDLLKTPKRTIGGKEVDVKRA 345
+ V +L+ + + GK + ++RA
Sbjct: 145 KDSATVEKVLQVKEHKLDGKTIQLRRA 171
>UniRef50_Q8MS04 Cluster: RH49436p; n=9; Endopterygota|Rep: RH49436p
- Drosophila melanogaster (Fruit fly)
Length = 634
Score = 101 bits (241), Expect = 7e-21
Identities = 50/126 (39%), Positives = 79/126 (62%), Gaps = 8/126 (6%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG--------KIFVGGLSSEIS 156
RGF FI F+ P +++KV+ HT++ KK+DPK A ++ KIFVGG+S + S
Sbjct: 244 RGFGFITFQEPCTVEKVLKVPIHTLDGKKIDPKHATPKNRPRQANKTKKIFVGGVSQDTS 303
Query: 157 DDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDV 336
+E++ +FS+FG + E M D+ + +GF F+TFE+E VV+ + + TI K+V+
Sbjct: 304 AEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVEC 363
Query: 337 KRATPK 354
K+A PK
Sbjct: 364 KKAQPK 369
Score = 78.2 bits (184), Expect = 5e-14
Identities = 35/79 (44%), Positives = 52/79 (65%)
Frame = +1
Query: 118 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 297
GK+FVGGLS + S D+++ +F+ FGT+ +V + D + +GF FITF+ V +LK
Sbjct: 203 GKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLK 262
Query: 298 TPKRTIGGKEVDVKRATPK 354
P T+ GK++D K ATPK
Sbjct: 263 VPIHTLDGKKIDPKHATPK 281
>UniRef50_Q5K6W6 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 480
Score = 98.7 bits (235), Expect = 3e-20
Identities = 44/123 (35%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA--KARH---GKIFVGGLSSEISDDE 165
RGFAF+ ++ P S+ KVMA H ++ K++DPK+A +A H K+FVGGL+ ++ +
Sbjct: 152 RGFAFLTYRDPASVTKVMAQTHH-LDGKQIDPKRAIPRAEHERTAKVFVGGLAPSVTGES 210
Query: 166 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 345
+++F +FG +++ + FDK + KGF F TF+ E+ V + + GK++++K+A
Sbjct: 211 LKSFLCQFGQVMDATVMFDKETGRSKGFAFATFQDEESVGRAMAASGVELEGKQIEIKKA 270
Query: 346 TPK 354
P+
Sbjct: 271 QPR 273
Score = 46.4 bits (105), Expect = 2e-04
Identities = 24/81 (29%), Positives = 43/81 (53%)
Frame = +1
Query: 118 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 297
GK+F+GGL+ E ++ + + +FG I + D + R GF F+T+ V ++
Sbjct: 112 GKMFIGGLNWETTEAGLSEYMGQFGEIDACTIMRDPSGRSR-GFAFLTYRDPASVTKVM- 169
Query: 298 TPKRTIGGKEVDVKRATPKPD 360
+ GK++D KRA P+ +
Sbjct: 170 AQTHHLDGKQIDPKRAIPRAE 190
>UniRef50_Q4WHA5 Cluster: Heterogeneous nuclear ribonucleoprotein
HRP1; n=1; Aspergillus fumigatus|Rep: Heterogeneous
nuclear ribonucleoprotein HRP1 - Aspergillus fumigatus
(Sartorya fumigata)
Length = 608
Score = 98.7 bits (235), Expect = 3e-20
Identities = 49/123 (39%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVGGLSSEISDDE 165
RGF F+ FK P++++ VM EH ++ K +DPK+A R KIFVGG+S E ++ E
Sbjct: 146 RGFGFLTFKDPKTVNTVMVK-EHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQEATEQE 204
Query: 166 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 345
+ FF++FG +++ + DK + +GF F+TF+SE V L P I GK ++VK+A
Sbjct: 205 FKEFFTQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRP-LAICGKPIEVKKA 263
Query: 346 TPK 354
P+
Sbjct: 264 QPR 266
Score = 66.1 bits (154), Expect = 2e-10
Identities = 29/81 (35%), Positives = 51/81 (62%)
Frame = +1
Query: 118 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 297
GK+F+GGL+ E +D +R++FS+FG + E + D + +GF F+TF+ + VN ++
Sbjct: 105 GKMFIGGLNWETTDQSLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVM- 163
Query: 298 TPKRTIGGKEVDVKRATPKPD 360
+ + GK +D KRA P+ +
Sbjct: 164 VKEHYLDGKIIDPKRAIPRDE 184
>UniRef50_UPI0000E4934F Cluster: PREDICTED: similar to musashi
nrp-1; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to musashi nrp-1 - Strongylocentrotus
purpuratus
Length = 229
Score = 97.9 bits (233), Expect = 6e-20
Identities = 47/127 (37%), Positives = 77/127 (60%), Gaps = 9/127 (7%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA--KARHGK-------IFVGGLSSEI 153
RGF F+ F P ++ V+ G H ++ KKVDPK A K H K IFVGG+++
Sbjct: 68 RGFGFVTFSDPAHVETVIQRGTHEVDKKKVDPKVAFPKRSHPKPVSKTKKIFVGGIAAST 127
Query: 154 SDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVD 333
++ ++ FF ++G + EV + FD+T N+ +GF F+ F++E+ V+ + + + GK V+
Sbjct: 128 TEPHLKKFFEKYGKVEEVTLMFDRTTNRHRGFGFVIFDNEKTVDSVCEEHFHELDGKLVE 187
Query: 334 VKRATPK 354
VK+A PK
Sbjct: 188 VKKAQPK 194
Score = 41.9 bits (94), Expect = 0.004
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +1
Query: 166 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 345
+R +F +FG + E + D T + +GF F+TF V +++ + K+VD K A
Sbjct: 43 LRKYFCQFGEVKECVIMRDTTTRRSRGFGFVTFSDPAHVETVIQRGTHEVDKKKVDPKVA 102
Query: 346 TPK 354
PK
Sbjct: 103 FPK 105
>UniRef50_O43347 Cluster: RNA-binding protein Musashi homolog 1;
n=65; Euteleostomi|Rep: RNA-binding protein Musashi
homolog 1 - Homo sapiens (Human)
Length = 362
Score = 97.9 bits (233), Expect = 6e-20
Identities = 48/127 (37%), Positives = 73/127 (57%), Gaps = 9/127 (7%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------KIFVGGLSSEI 153
RGF F+ F +DKV+A H +++K +DPK A R KIFVGGLS
Sbjct: 61 RGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNT 120
Query: 154 SDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVD 333
+ ++++ +F +FG + + + FDKT N+ +GF F+TFESE +V + + I K V+
Sbjct: 121 TVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVE 180
Query: 334 VKRATPK 354
K+A PK
Sbjct: 181 CKKAQPK 187
Score = 53.6 bits (123), Expect = 1e-06
Identities = 24/78 (30%), Positives = 44/78 (56%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+F+GGLS + + + +R +F +FG + E + D + +GF F+TF + V+ +L
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 301 PKRTIGGKEVDVKRATPK 354
+ + K +D K A P+
Sbjct: 81 SRHELDSKTIDPKVAFPR 98
>UniRef50_Q9HEH4 Cluster: Related to heterogeneous nuclear
ribonucleoprotein; n=13; Fungi/Metazoa group|Rep:
Related to heterogeneous nuclear ribonucleoprotein -
Neurospora crassa
Length = 503
Score = 96.3 bits (229), Expect = 2e-19
Identities = 50/123 (40%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVGGLSSEISDDE 165
RGF F+ FK P++++ VM EH ++ K +DPK+A R KIFVGG+S E +D E
Sbjct: 40 RGFGFLTFKDPKTVNIVMVK-EHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDHE 98
Query: 166 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 345
R +F++FG +++ + DK + +GF F+TFESE V L + I GK ++VK+A
Sbjct: 99 FREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACL-SANLEIHGKPIEVKKA 157
Query: 346 TPK 354
P+
Sbjct: 158 QPR 160
Score = 62.1 bits (144), Expect = 4e-09
Identities = 27/79 (34%), Positives = 50/79 (63%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 303
+F+GGL+ E +D +R++FS+FG ++E + D + +GF F+TF+ + VN ++
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVN-IVMVK 59
Query: 304 KRTIGGKEVDVKRATPKPD 360
+ + GK +D KRA P+ +
Sbjct: 60 EHYLDGKIIDPKRAIPRDE 78
>UniRef50_Q9UAF2 Cluster: Musashi; n=1; Halocynthia roretzi|Rep:
Musashi - Halocynthia roretzi (Sea squirt)
Length = 335
Score = 95.9 bits (228), Expect = 2e-19
Identities = 50/134 (37%), Positives = 77/134 (57%), Gaps = 16/134 (11%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK------------KAKARHG---KIFVG 135
RGF F+ F +S+ KV+ G H+++NKK+DPK A H KIF+G
Sbjct: 50 RGFGFVKFSDQQSVSKVLKNGPHSLDNKKIDPKPCTPKGIQQEKKSAAMEHTQSHKIFIG 109
Query: 136 GLSSEISDDEIRNFFSE-FGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRT 312
G++ + ++++ +F E FGT+ EV +K N+ KGF F+TF +EQ VN +
Sbjct: 110 GIAQSSTTEDVKKYFEEGFGTVNEVVFVINKEDNRHKGFGFVTFANEQAVNKAVDMHFHE 169
Query: 313 IGGKEVDVKRATPK 354
IG K+++ KRATP+
Sbjct: 170 IGDKQIEAKRATPR 183
Score = 67.7 bits (158), Expect = 7e-11
Identities = 30/79 (37%), Positives = 47/79 (59%)
Frame = +1
Query: 118 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 297
GKIF+GGL+ + DD +R +F FG ++E + DK +GF F+ F +Q V+ +LK
Sbjct: 9 GKIFIGGLARQTEDDGLRAYFESFGEVVESIVMKDKVTGFSRGFGFVKFSDQQSVSKVLK 68
Query: 298 TPKRTIGGKEVDVKRATPK 354
++ K++D K TPK
Sbjct: 69 NGPHSLDNKKIDPKPCTPK 87
>UniRef50_A7SCX6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 305
Score = 95.9 bits (228), Expect = 2e-19
Identities = 51/127 (40%), Positives = 76/127 (59%), Gaps = 9/127 (7%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVM-AAGEHTINNKKVDPKKA----KARH---GKIFVGGLSSEIS 156
RGFAF+ FK D V+ H ++ + +DPK A K H KIFVGGL E S
Sbjct: 70 RGFAFVQFKHQSEADAVLNQVDPHVLDGRTIDPKPAAPIGKPPHLRVKKIFVGGLKPETS 129
Query: 157 DDEIRNFFSE-FGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVD 333
D++IR +F + + + E+E + + N+R+GFCF++F+SE V+ + +T I G +V+
Sbjct: 130 DEKIREYFGKAYAPVKEIEYITEHSSNRRRGFCFVSFDSEDTVDKICETQFHNIEGNKVE 189
Query: 334 VKRATPK 354
VKRA PK
Sbjct: 190 VKRALPK 196
Score = 56.8 bits (131), Expect = 1e-07
Identities = 24/79 (30%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +1
Query: 118 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL- 294
GK+FVGGLS E + + ++ +FS++G ++ V++ D + +GF F+ F+ + + +L
Sbjct: 29 GKLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFKHQSEADAVLN 88
Query: 295 KTPKRTIGGKEVDVKRATP 351
+ + G+ +D K A P
Sbjct: 89 QVDPHVLDGRTIDPKPAAP 107
>UniRef50_A4R1M8 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 530
Score = 95.5 bits (227), Expect = 3e-19
Identities = 50/123 (40%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVGGLSSEISDDE 165
RGF F+ FK P++++ VM EH ++ K +DPK+A R KIFVGG+S E +D E
Sbjct: 122 RGFGFLTFKDPKTVNIVMVK-EHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDQE 180
Query: 166 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 345
++FF++FG +++ + DK + +GF F+TFESE V L I GK ++VK+A
Sbjct: 181 FKDFFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLARDLE-IHGKLIEVKKA 239
Query: 346 TPK 354
P+
Sbjct: 240 QPR 242
Score = 54.4 bits (125), Expect = 7e-07
Identities = 23/72 (31%), Positives = 45/72 (62%)
Frame = +1
Query: 145 SEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGK 324
++ D+ +R++FS+FG ++E + D T + +GF F+TF+ + VN ++ + + GK
Sbjct: 90 NQADDESLRDYFSQFGEVIECTVMRDGTTGRSRGFGFLTFKDPKTVN-IVMVKEHYLDGK 148
Query: 325 EVDVKRATPKPD 360
+D KRA P+ +
Sbjct: 149 IIDPKRAIPRDE 160
>UniRef50_Q21911 Cluster: Putative uncharacterized protein msi-1;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein msi-1 - Caenorhabditis elegans
Length = 320
Score = 94.3 bits (224), Expect = 7e-19
Identities = 45/127 (35%), Positives = 75/127 (59%), Gaps = 9/127 (7%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK---------KAKARHGKIFVGGLSSEI 153
RGF FI F P S+DKV+ EH ++ KK+DPK K + K+F+GGLS+
Sbjct: 86 RGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATS 145
Query: 154 SDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVD 333
+ ++++ +F +G + + + FDK + +GF F+TF+S++V + + + I GK V+
Sbjct: 146 TLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVE 205
Query: 334 VKRATPK 354
K+A PK
Sbjct: 206 CKKAQPK 212
Score = 61.3 bits (142), Expect = 6e-09
Identities = 31/97 (31%), Positives = 50/97 (51%)
Frame = +1
Query: 64 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRK 243
E +N D GK+F+GGLS + + + +R++F FG + E + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 244 GFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 354
GF FITF V+ +L + + GK++D K A PK
Sbjct: 87 GFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
>UniRef50_Q99383 Cluster: Nuclear polyadenylated RNA-binding protein
4; n=7; Saccharomycetales|Rep: Nuclear polyadenylated
RNA-binding protein 4 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 534
Score = 93.9 bits (223), Expect = 1e-18
Identities = 43/123 (34%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-----GKIFVGGLSSEISDDE 165
RGF F+ F+ P S+D+V+ +H ++ K +DPK+A R GKIFVGG+ ++ E
Sbjct: 200 RGFGFLSFEKPSSVDEVVKT-QHILDGKVIDPKRAIPRDEQDKTGKIFVGGIGPDVRPKE 258
Query: 166 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 345
FFS++GTI++ ++ DK Q +GF F+T++S V+ + + +++++KRA
Sbjct: 259 FEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRA 318
Query: 346 TPK 354
P+
Sbjct: 319 EPR 321
Score = 65.3 bits (152), Expect = 4e-10
Identities = 26/80 (32%), Positives = 54/80 (67%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+F+GGL+ + ++D +R +F ++GT+ ++++ D + +GF F++FE V++++KT
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 301 PKRTIGGKEVDVKRATPKPD 360
+ + GK +D KRA P+ +
Sbjct: 220 -QHILDGKVIDPKRAIPRDE 238
Score = 31.1 bits (67), Expect = 7.9
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 117
RGF F+ + + +++D+V ++K++ K+A+ RH
Sbjct: 284 RGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPRH 322
>UniRef50_P48809 Cluster: Heterogeneous nuclear ribonucleoprotein
27C; n=11; Endopterygota|Rep: Heterogeneous nuclear
ribonucleoprotein 27C - Drosophila melanogaster (Fruit
fly)
Length = 421
Score = 93.5 bits (222), Expect = 1e-18
Identities = 42/127 (33%), Positives = 76/127 (59%), Gaps = 9/127 (7%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA------KARHG---KIFVGGLSSEI 153
RGF F+ F P +++ V+ G HT++ + +DPK K + G K+F+GGL S +
Sbjct: 48 RGFGFVTFADPTNVNHVLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNV 107
Query: 154 SDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVD 333
++ ++R FF+ +G + EV + +D+ K + +GF F++FE E V + + GK+V+
Sbjct: 108 TETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVE 167
Query: 334 VKRATPK 354
+K+A P+
Sbjct: 168 IKKAEPR 174
Score = 59.3 bits (137), Expect = 3e-08
Identities = 26/79 (32%), Positives = 44/79 (55%)
Frame = +1
Query: 118 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 297
GK+FVGGLS E + + + +F FG I++ + + + +GF F+TF VN +L+
Sbjct: 7 GKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ 66
Query: 298 TPKRTIGGKEVDVKRATPK 354
T+ G+ +D K P+
Sbjct: 67 NGPHTLDGRTIDPKPCNPR 85
Score = 32.7 bits (71), Expect = 2.6
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEIS 156
RGF F+ F+ S++ V +N K+V+ KKA+ R G GG +S S
Sbjct: 137 RGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRDGS---GGQNSNNS 185
>UniRef50_Q9D3U4 Cluster: Adult male testis cDNA, RIKEN full-length
enriched library, clone:4933434H11 product:similar to
telomeric and tetraplex DNA binding protein qTBP42 V;
n=2; Murinae|Rep: Adult male testis cDNA, RIKEN
full-length enriched library, clone:4933434H11
product:similar to telomeric and tetraplex DNA binding
protein qTBP42 V - Mus musculus (Mouse)
Length = 565
Score = 91.1 bits (216), Expect = 7e-18
Identities = 45/123 (36%), Positives = 71/123 (57%), Gaps = 5/123 (4%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----KIFVGGLSSEISDDE 165
RGF F++FK +++KV+ +H ++ KK++ K+AKA KIFVGGL+ +S+++
Sbjct: 74 RGFGFVLFKDSATVEKVLQVKDHKVDGKKIEFKRAKALESQFPNKKIFVGGLNPRLSEEK 133
Query: 166 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 345
IR +F FG I +E+P +R+ F FI + E V +L+ IG +VK A
Sbjct: 134 IRAYFGTFGQIEAIELPLCSDTRERRAFGFIKYMDENSVRKVLENRYHFIGSSRCEVKMA 193
Query: 346 TPK 354
PK
Sbjct: 194 YPK 196
Score = 59.7 bits (138), Expect = 2e-08
Identities = 27/87 (31%), Positives = 47/87 (54%)
Frame = +1
Query: 85 KVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 264
K+D K + K+F+GGLS E+S + + S+FG I++ + D +GF F+ F
Sbjct: 22 KIDATKNQQDASKMFIGGLSQEMSKQVLLEYLSKFGEIIDFIIKTDPNTGLSRGFGFVLF 81
Query: 265 ESEQVVNDLLKTPKRTIGGKEVDVKRA 345
+ V +L+ + GK+++ KRA
Sbjct: 82 KDSATVEKVLQVKDHKVDGKKIEFKRA 108
>UniRef50_A4V6K1 Cluster: DAZ-associated protein; n=2;
Platyhelminthes|Rep: DAZ-associated protein - Dugesia
japonica (Planarian)
Length = 296
Score = 90.2 bits (214), Expect = 1e-17
Identities = 44/125 (35%), Positives = 78/125 (62%), Gaps = 7/125 (5%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK------KAKARHG-KIFVGGLSSEISD 159
RGF ++ + E++ KVM+ +H + K++DPK K ++R KIFVGG++ E ++
Sbjct: 56 RGFGYVRYSDNEAVQKVMST-KHHLEGKEIDPKPCNVNMKGRSRRQLKIFVGGIAPEHNE 114
Query: 160 DEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVK 339
+ +R+FF +FG I E+ + D++ ++ +GF F+ F+ E VV L+ TIG K+V++K
Sbjct: 115 ETLRDFFKQFGNITELTLMKDQSGHRHRGFAFVAFDDEAVVKQLINDHILTIGNKQVEIK 174
Query: 340 RATPK 354
P+
Sbjct: 175 PMEPQ 179
Score = 58.0 bits (134), Expect = 6e-08
Identities = 23/74 (31%), Positives = 45/74 (60%)
Frame = +1
Query: 118 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 297
GK+FVGGL +++ ++++FS+FG ++E + D + +GF ++ + + V ++
Sbjct: 15 GKLFVGGLHQSTTNESLKSYFSKFGDVVEASVMMDHRTGRSRGFGYVRYSDNEAVQKVMS 74
Query: 298 TPKRTIGGKEVDVK 339
T K + GKE+D K
Sbjct: 75 T-KHHLEGKEIDPK 87
>UniRef50_Q96EP5 Cluster: DAZ-associated protein 1; n=39;
Euteleostomi|Rep: DAZ-associated protein 1 - Homo
sapiens (Human)
Length = 407
Score = 88.2 bits (209), Expect = 5e-17
Identities = 50/141 (35%), Positives = 75/141 (53%), Gaps = 23/141 (16%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK----------KAKARHG---------- 120
RGF F+ FK P + V+A+ HT++ + +DPK + + + G
Sbjct: 51 RGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNS 110
Query: 121 ---KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 291
KIFVGG+ + E+R +F +FG + EV M +D K + +GF FITFE EQ V+
Sbjct: 111 KSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQA 170
Query: 292 LKTPKRTIGGKEVDVKRATPK 354
+ I GK+V+VKRA P+
Sbjct: 171 VNMHFHDIMGKKVEVKRAEPR 191
Score = 68.1 bits (159), Expect = 6e-11
Identities = 28/79 (35%), Positives = 49/79 (62%)
Frame = +1
Query: 118 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 297
GK+FVGGL + + +R++FS++G +++ + DKT NQ +GF F+ F+ V +L
Sbjct: 10 GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69
Query: 298 TPKRTIGGKEVDVKRATPK 354
+ T+ G+ +D K TP+
Sbjct: 70 SRPHTLDGRNIDPKPCTPR 88
Score = 37.5 bits (83), Expect = 0.091
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK 123
RGF FI F+ +S+D+ + H I KKV+ K+A+ R K
Sbjct: 154 RGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSK 194
>UniRef50_UPI000023D975 Cluster: hypothetical protein FG10273.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG10273.1 - Gibberella zeae PH-1
Length = 552
Score = 87.8 bits (208), Expect = 6e-17
Identities = 47/128 (36%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNK-----KVDPKKAKARH-----GKIFVGGLSSE 150
RGF F+ FK ++++ VM EH ++ K ++DPK+A R KIFVGG+S E
Sbjct: 162 RGFGFLTFKDAKTVNIVMVK-EHFLDGKILILLQIDPKRAIPRDEQEKTSKIFVGGVSQE 220
Query: 151 ISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEV 330
+D E + +F++FG +++ + DK + +GF F+TFE+E V+ + P I GK +
Sbjct: 221 TTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFVTFENEAGVDACINVPLE-IHGKPI 279
Query: 331 DVKRATPK 354
+VK+A P+
Sbjct: 280 EVKKAQPR 287
Score = 62.5 bits (145), Expect = 3e-09
Identities = 31/93 (33%), Positives = 58/93 (62%), Gaps = 6/93 (6%)
Frame = +1
Query: 100 KAKARH-GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 276
KA A+ GK+F+GGL+ E +D +R++F++FG ++E + D + + +GF F+TF+ +
Sbjct: 114 KASAKEDGKMFIGGLNWETTDQSLRDYFAQFGEVVECTVMRDSSTGRSRGFGFLTFKDAK 173
Query: 277 VVNDLLKTPKRTIGGK-----EVDVKRATPKPD 360
VN ++ + + GK ++D KRA P+ +
Sbjct: 174 TVN-IVMVKEHFLDGKILILLQIDPKRAIPRDE 205
>UniRef50_Q9LHL2 Cluster: Similarity to RNA binding protein; n=13;
Magnoliophyta|Rep: Similarity to RNA binding protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 358
Score = 87.8 bits (208), Expect = 6e-17
Identities = 49/130 (37%), Positives = 80/130 (61%), Gaps = 12/130 (9%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA--KARHG---------KIFVGGLSS 147
RGF FI F P +DKV+ H IN K+V+ K+ K G KIFVGG+ S
Sbjct: 60 RGFGFITFADPSVVDKVIE-DTHVINGKQVEIKRTIPKGAGGNQSKDIKTKKIFVGGIPS 118
Query: 148 EISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL-KTPKRTIGGK 324
+++DE+++FF+++G ++E ++ D N+ +GF F+ F+SE+VV++LL K +
Sbjct: 119 TVTEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADT 178
Query: 325 EVDVKRATPK 354
+V++K+A PK
Sbjct: 179 QVEIKKAEPK 188
Score = 58.4 bits (135), Expect = 5e-08
Identities = 29/82 (35%), Positives = 46/82 (56%)
Frame = +1
Query: 109 ARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVND 288
A GKIF+GGL + ++ F ++G I + + D+ Q +GF FITF VV+
Sbjct: 16 ASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDK 75
Query: 289 LLKTPKRTIGGKEVDVKRATPK 354
+++ I GK+V++KR PK
Sbjct: 76 VIE-DTHVINGKQVEIKRTIPK 96
>UniRef50_Q1ENZ5 Cluster: RNA-binding protein, putative; n=2;
Magnoliophyta|Rep: RNA-binding protein, putative - Musa
acuminata (Banana)
Length = 465
Score = 87.4 bits (207), Expect = 9e-17
Identities = 53/140 (37%), Positives = 78/140 (55%), Gaps = 22/140 (15%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR--------------HG------ 120
RGF F+VF P ++V+ +HTI+ + V+ KKA R HG
Sbjct: 47 RGFGFVVFADPAVTERVVTE-KHTIDGRMVEAKKAVPRDDHQFLNKNSSSSIHGSPVPGH 105
Query: 121 --KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 294
KIFVGGLSS I++ + + +F +FGTI +V + +D + +GF FIT++SE V+ +L
Sbjct: 106 TKKIFVGGLSSTITEGDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKVL 165
Query: 295 KTPKRTIGGKEVDVKRATPK 354
+ GK V+VKRA PK
Sbjct: 166 LNAFHELNGKMVEVKRAVPK 185
Score = 70.9 bits (166), Expect = 8e-12
Identities = 30/81 (37%), Positives = 53/81 (65%)
Frame = +1
Query: 118 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 297
GK+F+GG+S + ++D +R +FS FG ++E + D+T + +GF F+ F ++ V + +
Sbjct: 6 GKLFIGGISWDTNEDSLRKYFSAFGEVVEAVIMKDRTTGRARGFGFVVF-ADPAVTERVV 64
Query: 298 TPKRTIGGKEVDVKRATPKPD 360
T K TI G+ V+ K+A P+ D
Sbjct: 65 TEKHTIDGRMVEAKKAVPRDD 85
>UniRef50_Q66IT0 Cluster: MGC84815 protein; n=1; Xenopus laevis|Rep:
MGC84815 protein - Xenopus laevis (African clawed frog)
Length = 291
Score = 86.6 bits (205), Expect = 1e-16
Identities = 42/130 (32%), Positives = 70/130 (53%), Gaps = 10/130 (7%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR-------HG---KIFVGGLSSE 150
RGF F+ FK S+DK A H ++ K VD K+A R H KIFVGGL +
Sbjct: 54 RGFGFVTFKEASSVDKAQADRPHKVDGKDVDSKRAMPREETSPEVHAAVKKIFVGGLKKD 113
Query: 151 ISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEV 330
++++++ +F +FG + + + K N +GF F+TF+ V+ ++ IGG +
Sbjct: 114 VTNEDLAEYFGKFGNVTDASIVVAKDTNTSRGFAFVTFDDTDSVDKVILARPHMIGGHKA 173
Query: 331 DVKRATPKPD 360
DV++A + +
Sbjct: 174 DVRKALSREE 183
Score = 64.9 bits (151), Expect = 5e-10
Identities = 31/90 (34%), Positives = 54/90 (60%)
Frame = +1
Query: 91 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 270
DPK + + K+FVGGL+ + ++D +R ++S++G I +V + D N+ +GF F+TF+
Sbjct: 6 DPKADQDK--KLFVGGLNPKTNEDSLRAYYSQWGEITDVVVMKDPRSNKSRGFGFVTFKE 63
Query: 271 EQVVNDLLKTPKRTIGGKEVDVKRATPKPD 360
V+ + GK+VD KRA P+ +
Sbjct: 64 ASSVDKAQADRPHKVDGKDVDSKRAMPREE 93
>UniRef50_Q8W034 Cluster: Ribonucleoprotein 1; n=5; core
eudicotyledons|Rep: Ribonucleoprotein 1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 411
Score = 85.0 bits (201), Expect = 5e-16
Identities = 47/143 (32%), Positives = 79/143 (55%), Gaps = 25/143 (17%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-------------------- 120
RGF F++F P +D+V+ +H+I+ ++VD K+A +R
Sbjct: 47 RGFGFVIFSDPSVLDRVLQE-KHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDA 105
Query: 121 -----KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVN 285
KIFVGGL ++D+E R +F +G + +V + +D+ N+ +GF F++F+SE V+
Sbjct: 106 YNKTKKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVD 165
Query: 286 DLLKTPKRTIGGKEVDVKRATPK 354
+L + GK+V+VKRA PK
Sbjct: 166 SVLHKTFHDLSGKQVEVKRALPK 188
Score = 60.9 bits (141), Expect = 9e-09
Identities = 29/81 (35%), Positives = 50/81 (61%)
Frame = +1
Query: 118 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 297
GK+FVGG+S E +D++R F+ +G + + + DK + +GF F+ F V++ +L+
Sbjct: 6 GKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQ 65
Query: 298 TPKRTIGGKEVDVKRATPKPD 360
K +I +EVDVKRA + +
Sbjct: 66 -EKHSIDTREVDVKRAMSREE 85
>UniRef50_Q86ER1 Cluster: Clone ZZD1516 mRNA sequence; n=2;
Schistosoma japonicum|Rep: Clone ZZD1516 mRNA sequence -
Schistosoma japonicum (Blood fluke)
Length = 313
Score = 84.6 bits (200), Expect = 6e-16
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 11/129 (8%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----------KIFVGGLSS 147
RGF FI +K PE +D A H I+ K V+ K+A R K+FVGGL
Sbjct: 58 RGFGFITYKEPEMVDAAQANRPHEIDGKTVEAKRAMPREDSNSPESHMTVTKLFVGGLKK 117
Query: 148 EISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKE 327
+++ +E+R +FS++G I E E+ K + +GF F+TF+ V+ + IG
Sbjct: 118 DVTHEELREYFSKYGNITECEVVAWKESGESRGFGFVTFDDYDPVDKAILYKPHHIGSSR 177
Query: 328 VDVKRATPK 354
DVK+A K
Sbjct: 178 ADVKKALSK 186
Score = 61.3 bits (142), Expect = 6e-09
Identities = 27/80 (33%), Positives = 51/80 (63%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+F+GGL+ ++ ++++F+S++G I++V + D N+ +GF FIT++ ++V+
Sbjct: 18 KLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDAAQAN 77
Query: 301 PKRTIGGKEVDVKRATPKPD 360
I GK V+ KRA P+ D
Sbjct: 78 RPHEIDGKTVEAKRAMPRED 97
>UniRef50_Q9LNP1 Cluster: F1L3.34; n=2; Arabidopsis thaliana|Rep:
F1L3.34 - Arabidopsis thaliana (Mouse-ear cress)
Length = 392
Score = 83.4 bits (197), Expect = 1e-15
Identities = 47/131 (35%), Positives = 76/131 (58%), Gaps = 13/131 (9%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK------------KAKARHGKIFVGGLS 144
RGF F+ F +KV+ +H I+++KVD K KA ++ KIFVGGL
Sbjct: 130 RGFGFVTFADSAVAEKVLEE-DHVIDDRKVDLKRTLPRGDKDTDIKAVSKTRKIFVGGLP 188
Query: 145 SEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK-RTIGG 321
+ +DE++N+F +G I+E ++ +D + +GF F+TF++E V+ L K +G
Sbjct: 189 PLLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGD 248
Query: 322 KEVDVKRATPK 354
K+V++KRA PK
Sbjct: 249 KQVEIKRAEPK 259
Score = 55.2 bits (127), Expect = 4e-07
Identities = 26/80 (32%), Positives = 45/80 (56%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+FVGG+S E + + N+F +FG +++ + D+ +GF F+TF V +L+
Sbjct: 90 KLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLE- 148
Query: 301 PKRTIGGKEVDVKRATPKPD 360
I ++VD+KR P+ D
Sbjct: 149 EDHVIDDRKVDLKRTLPRGD 168
>UniRef50_P51991 Cluster: Heterogeneous nuclear ribonucleoprotein
A3; n=98; Coelomata|Rep: Heterogeneous nuclear
ribonucleoprotein A3 - Homo sapiens (Human)
Length = 378
Score = 83.4 bits (197), Expect = 1e-15
Identities = 39/131 (29%), Positives = 70/131 (53%), Gaps = 11/131 (8%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----------KIFVGGLSS 147
RGF F+ + E +D M A H ++ + V+PK+A +R KIFVGG+
Sbjct: 76 RGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKE 135
Query: 148 EISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKE 327
+ + +R++F ++G I +E+ D+ +++GF F+TF+ V+ ++ TI G
Sbjct: 136 DTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHN 195
Query: 328 VDVKRATPKPD 360
+VK+A K +
Sbjct: 196 CEVKKALSKQE 206
Score = 58.0 bits (134), Expect = 6e-08
Identities = 28/90 (31%), Positives = 50/90 (55%)
Frame = +1
Query: 91 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 270
DPK+ + K+F+GGLS E +DD +R F ++GT+ + + D + +GF F+T+
Sbjct: 27 DPKEPEQLR-KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSC 85
Query: 271 EQVVNDLLKTPKRTIGGKEVDVKRATPKPD 360
+ V+ + + G+ V+ KRA + D
Sbjct: 86 VEEVDAAMCARPHKVDGRVVEPKRAVSRED 115
>UniRef50_Q4PBU3 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 588
Score = 66.5 bits (155), Expect(2) = 2e-15
Identities = 31/80 (38%), Positives = 45/80 (56%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+FVGGL ++ R FF +FGT+ + D+ + +GF F+T+ + +N +L T
Sbjct: 279 KLFVGGLPPSVTPATFRTFFEQFGTLSDCTCMMDRETGKPRGFGFLTYADDSSLNHVLNT 338
Query: 301 PKRTIGGKEVDVKRATPKPD 360
GKEVDVKRA K D
Sbjct: 339 RPIVFDGKEVDVKRAQSKND 358
Score = 63.3 bits (147), Expect = 2e-09
Identities = 29/95 (30%), Positives = 54/95 (56%)
Frame = +1
Query: 73 INNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFC 252
++N+ P + GK+F+GGL+ + ++D +R +FS+FG + + D + +GF
Sbjct: 155 LDNRSAMPHEMP-EEGKMFIGGLNWDTTEDSLRRYFSQFGEVGNCAIMRDNMTGRSRGFA 213
Query: 253 FITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKP 357
F+ F + VN ++ + + GK +D KRA P+P
Sbjct: 214 FLNFVDPKAVNTVM-VREHYLDGKVIDPKRAIPRP 247
Score = 37.1 bits (82), Expect(2) = 2e-15
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 114
RGFAF+ F P++++ VM EH ++ K +DPK+A R
Sbjct: 210 RGFAFLNFVDPKAVNTVMVR-EHYLDGKVIDPKRAIPR 246
>UniRef50_Q9FM47 Cluster: Similarity to RNA binding protein; n=5;
Magnoliophyta|Rep: Similarity to RNA binding protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 423
Score = 83.0 bits (196), Expect = 2e-15
Identities = 46/128 (35%), Positives = 72/128 (56%), Gaps = 10/128 (7%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------KIFVGGLSSEI 153
RGF F+ + +DKV+ H I K+V+ K+ R KIFVGG+ S +
Sbjct: 83 RGFGFVTYADSSVVDKVIQ-DNHIIIGKQVEIKRTIPRGSMSSNDFKTKKIFVGGIPSSV 141
Query: 154 SDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKR-TIGGKEV 330
DDE + FF +FG + E ++ D + + +GF F+T+ESE +V+ LL R + G +V
Sbjct: 142 DDDEFKEFFMQFGELKEHQIMRDHSTGRSRGFGFVTYESEDMVDHLLAKGNRIELSGTQV 201
Query: 331 DVKRATPK 354
++K+A PK
Sbjct: 202 EIKKAEPK 209
Score = 57.6 bits (133), Expect = 8e-08
Identities = 28/79 (35%), Positives = 46/79 (58%)
Frame = +1
Query: 118 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 297
GKIFVGGL+ E + E F ++G I + + D+ Q +GF F+T+ VV+ +++
Sbjct: 42 GKIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKVIQ 101
Query: 298 TPKRTIGGKEVDVKRATPK 354
I GK+V++KR P+
Sbjct: 102 -DNHIIIGKQVEIKRTIPR 119
>UniRef50_Q9SU99 Cluster: HnRNP-like protein; n=10; core
eudicotyledons|Rep: HnRNP-like protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 524
Score = 82.6 bits (195), Expect = 2e-15
Identities = 55/146 (37%), Positives = 78/146 (53%), Gaps = 28/146 (19%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR-------------------HG- 120
RGF FIVF P ++V+ +H I+ + V+ KKA R HG
Sbjct: 49 RGFGFIVFADPSVAERVI-MDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGG 107
Query: 121 --------KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 276
KIFVGGL S I++ E +N+F +FGTI +V + +D + +GF FITF+SE+
Sbjct: 108 NGGGARTKKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEE 167
Query: 277 VVNDLLKTPKRTIGGKEVDVKRATPK 354
V+ +L + GK V+VKRA PK
Sbjct: 168 SVDMVLHKTFHELNGKMVEVKRAVPK 193
Score = 60.1 bits (139), Expect = 1e-08
Identities = 25/81 (30%), Positives = 48/81 (59%)
Frame = +1
Query: 118 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 297
GK+F+GG+S + ++ ++ +F ++G ++E + D+T + +GF FI F V ++
Sbjct: 8 GKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVI- 66
Query: 298 TPKRTIGGKEVDVKRATPKPD 360
K I G+ V+ K+A P+ D
Sbjct: 67 MDKHIIDGRTVEAKKAVPRDD 87
>UniRef50_Q5TTQ2 Cluster: ENSANGP00000026814; n=3;
Endopterygota|Rep: ENSANGP00000026814 - Anopheles
gambiae str. PEST
Length = 358
Score = 82.6 bits (195), Expect = 2e-15
Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 11/131 (8%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----------KIFVGGLSS 147
RGF FI + ID A+ H I+ + V+PK+A R K+FVGGL
Sbjct: 68 RGFGFITYSKSYMIDDAQASRPHKIDGRVVEPKRAVPRQDINRPEAGSSVKKLFVGGLRD 127
Query: 148 EISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKE 327
+ ++ +R +FS++G ++ + DK +++GF F+ F+ V+ ++ TI K
Sbjct: 128 DFDEEHLREYFSKYGNVISACIVTDKDNGKKRGFGFVEFDDYDPVDKIILQKSHTIQNKL 187
Query: 328 VDVKRATPKPD 360
+DVK+A PK D
Sbjct: 188 LDVKKALPKQD 198
Score = 60.1 bits (139), Expect = 1e-08
Identities = 25/80 (31%), Positives = 47/80 (58%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+F+GGL +DD ++ +F ++G +++V + D + +GF FIT+ +++D +
Sbjct: 28 KLFIGGLDYRTTDDTLKAYFEKWGKVVDVVVMKDPKTKRSRGFGFITYSKSYMIDDAQAS 87
Query: 301 PKRTIGGKEVDVKRATPKPD 360
I G+ V+ KRA P+ D
Sbjct: 88 RPHKIDGRVVEPKRAVPRQD 107
>UniRef50_A2YWJ2 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 424
Score = 81.4 bits (192), Expect = 6e-15
Identities = 44/128 (34%), Positives = 73/128 (57%), Gaps = 10/128 (7%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------KIFVGGLSSEI 153
RGF FI + P +D+VM H N K+V+ K+ + KIFVGGL +
Sbjct: 126 RGFGFITYSNPAVVDRVMD-DIHEFNGKQVEIKRTIPKDSVQSKDFKTKKIFVGGLPQAL 184
Query: 154 SDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKR-TIGGKEV 330
++D+ ++FF ++G +++ ++ D + +GF FI F S+QVV+DLL + G +V
Sbjct: 185 TEDDFKHFFQKYGPVVDHQIMRDHQTKRSRGFGFIVFSSDQVVDDLLANGNMIDLAGAKV 244
Query: 331 DVKRATPK 354
++K+A PK
Sbjct: 245 EIKKAEPK 252
Score = 41.5 bits (93), Expect = 0.006
Identities = 21/59 (35%), Positives = 34/59 (57%)
Frame = +1
Query: 178 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 354
F ++G I++ + DK +Q +GF FIT+ + VV D + GK+V++KR PK
Sbjct: 105 FGQYGEIVDSVIMRDKHTSQPRGFGFITYSNPAVV-DRVMDDIHEFNGKQVEIKRTIPK 162
>UniRef50_Q8W4A6 Cluster: Putative uncharacterized protein MJH23.3;
n=2; Arabidopsis thaliana|Rep: Putative uncharacterized
protein MJH23.3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 231
Score = 81.0 bits (191), Expect = 7e-15
Identities = 43/109 (39%), Positives = 69/109 (63%), Gaps = 11/109 (10%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA--KARHG---------KIFVGGLSS 147
RGF FI F P +DKV+ H IN K+V+ K+ K G KIFVGG+ S
Sbjct: 60 RGFGFITFADPSVVDKVIE-DTHVINGKQVEIKRTIPKGAGGNQSKDIKTKKIFVGGIPS 118
Query: 148 EISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 294
+++DE+++FF+++G ++E ++ D N+ +GF F+ F+SE+VV++LL
Sbjct: 119 TVTEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELL 167
Score = 58.4 bits (135), Expect = 5e-08
Identities = 29/82 (35%), Positives = 46/82 (56%)
Frame = +1
Query: 109 ARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVND 288
A GKIF+GGL + ++ F ++G I + + D+ Q +GF FITF VV+
Sbjct: 16 ASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDK 75
Query: 289 LLKTPKRTIGGKEVDVKRATPK 354
+++ I GK+V++KR PK
Sbjct: 76 VIE-DTHVINGKQVEIKRTIPK 96
>UniRef50_P09651 Cluster: Heterogeneous nuclear ribonucleoprotein
A1; n=390; Euteleostomi|Rep: Heterogeneous nuclear
ribonucleoprotein A1 - Homo sapiens (Human)
Length = 372
Score = 80.2 bits (189), Expect = 1e-14
Identities = 37/131 (28%), Positives = 70/131 (53%), Gaps = 11/131 (8%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----------KIFVGGLSS 147
RGF F+ + E +D M A H ++ + V+PK+A +R KIFVGG+
Sbjct: 55 RGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKE 114
Query: 148 EISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKE 327
+ + +R++F ++G I +E+ D+ +++GF F+TF+ V+ ++ T+ G
Sbjct: 115 DTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHN 174
Query: 328 VDVKRATPKPD 360
+V++A K +
Sbjct: 175 CEVRKALSKQE 185
Score = 58.4 bits (135), Expect = 5e-08
Identities = 27/94 (28%), Positives = 53/94 (56%)
Frame = +1
Query: 79 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFI 258
+K PK+ + K+F+GGLS E +D+ +R+ F ++GT+ + + D + +GF F+
Sbjct: 2 SKSESPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
Query: 259 TFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 360
T+ + + V+ + + G+ V+ KRA + D
Sbjct: 61 TYATVEEVDAAMNARPHKVDGRVVEPKRAVSRED 94
>UniRef50_Q9U5E3 Cluster: CiMsi; n=1; Ciona intestinalis|Rep: CiMsi
- Ciona intestinalis (Transparent sea squirt)
Length = 393
Score = 79.8 bits (188), Expect = 2e-14
Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 17/132 (12%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK----KAK-----------ARHGKIFVG 135
RGF F+ F P S+ V+ A H ++NK +DPK KA ++ KIF+G
Sbjct: 51 RGFGFVTFTNPSSVAAVVKARPHNLDNKMIDPKPCTTKAAQQQKKVSSTNYSKAHKIFIG 110
Query: 136 GLSSEISDDEIRNFFSEFGTILEVEMPFDK--TKNQRKGFCFITFESEQVVNDLLKTPKR 309
G+S E S+ +++++F +GT++EV +K T KGF F+TFE E V+ +
Sbjct: 111 GISMEASEADVQSYFERYGTVVEVVFVVNKEDTSKPHKGFGFVTFEDESSVDQAIAKHYH 170
Query: 310 TIGGKEVDVKRA 345
I K V+ K+A
Sbjct: 171 IIKDKRVEAKKA 182
Score = 52.8 bits (121), Expect = 2e-06
Identities = 25/79 (31%), Positives = 43/79 (54%)
Frame = +1
Query: 118 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 297
GKIFVGGL+ + + + +R++F +G + + + DK +GF F+TF + V ++K
Sbjct: 10 GKIFVGGLARQTTLEGLRSYFENYGEVSDCVLMKDKETGFSRGFGFVTFTNPSSVAAVVK 69
Query: 298 TPKRTIGGKEVDVKRATPK 354
+ K +D K T K
Sbjct: 70 ARPHNLDNKMIDPKPCTTK 88
Score = 38.7 bits (86), Expect = 0.039
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 114
+GF F+ F+ S+D+ +A H I +K+V+ KKA++R
Sbjct: 148 KGFGFVTFEDESSVDQAIAKHYHIIKDKRVEAKKAESR 185
>UniRef50_A7NUC5 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 494
Score = 79.0 bits (186), Expect = 3e-14
Identities = 36/78 (46%), Positives = 52/78 (66%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KIFVGGLSS ++++E +N+F FG I +V + D + +GF FITFESE+ V +++
Sbjct: 124 KIFVGGLSSNLTEEEFKNYFERFGRITDVVVMHDSATRRPRGFGFITFESEESVEHVMQN 183
Query: 301 PKRTIGGKEVDVKRATPK 354
+ GK V+VKRA PK
Sbjct: 184 NFYELNGKRVEVKRAVPK 201
Score = 49.6 bits (113), Expect = 2e-05
Identities = 21/52 (40%), Positives = 35/52 (67%)
Frame = +1
Query: 109 ARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 264
A K+FVGG+S I++ +R++FS++GT++E + D + R GF F+TF
Sbjct: 2 AEQVKLFVGGVSGAITEGLLRDYFSKYGTVVETYIRRDSGRTPRGGFGFVTF 53
Score = 36.7 bits (81), Expect = 0.16
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 105
RGF FI F++ ES++ VM + +N K+V+ K+A
Sbjct: 164 RGFGFITFESEESVEHVMQNNFYELNGKRVEVKRA 198
>UniRef50_P48810 Cluster: Heterogeneous nuclear ribonucleoprotein
87F; n=16; Coelomata|Rep: Heterogeneous nuclear
ribonucleoprotein 87F - Drosophila melanogaster (Fruit
fly)
Length = 385
Score = 78.6 bits (185), Expect = 4e-14
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 11/131 (8%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----------KIFVGGLSS 147
RGF FI + ID A H I+ + V+PK+A R K+FVGGL
Sbjct: 65 RGFGFITYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRD 124
Query: 148 EISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKE 327
+ ++ +R +F +FG I+ V + DK +++GF FI F+ V+ ++ +I K
Sbjct: 125 DHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKT 184
Query: 328 VDVKRATPKPD 360
+DVK+A K D
Sbjct: 185 LDVKKAIAKQD 195
Score = 55.6 bits (128), Expect = 3e-07
Identities = 24/80 (30%), Positives = 45/80 (56%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+F+GGL +DD ++ F ++G I++V + D + +GF FIT+ ++++
Sbjct: 25 KLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNA 84
Query: 301 PKRTIGGKEVDVKRATPKPD 360
I G+ V+ KRA P+ +
Sbjct: 85 RPHKIDGRTVEPKRAVPRQE 104
Score = 40.3 bits (90), Expect = 0.013
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGG 138
RGFAFI F + +DK++ H+I NK +D KKA A+ GG
Sbjct: 156 RGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDMDRQGG 201
>UniRef50_Q4SQV2 Cluster: Chromosome 1 SCAF14529, whole genome
shotgun sequence; n=10; Euteleostomi|Rep: Chromosome 1
SCAF14529, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 487
Score = 78.2 bits (184), Expect = 5e-14
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 11/131 (8%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----------KIFVGGLSS 147
R F F+ + PE D MAA HT++ V+ K+A AR KIFVGGL
Sbjct: 46 RCFGFVTYSTPEEADSAMAARPHTVDGNPVEVKRAVAREDAGKPEALAKVKKIFVGGLKD 105
Query: 148 EISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKE 327
+ ++ + FS+FG I + E+ DK +++GF F+ F + + + TI G +
Sbjct: 106 DTEENHLTEHFSQFGEIEKAEVISDKETGKKRGFGFVYFVDQDSADKSVVIKFHTINGHK 165
Query: 328 VDVKRATPKPD 360
V+VK+A K +
Sbjct: 166 VEVKKALTKQE 176
Score = 77.4 bits (182), Expect = 9e-14
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 11/131 (8%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----------KIFVGGLSS 147
R F FI + PE D MAA H ++ V+ K+A AR KIFVGG+
Sbjct: 299 RCFGFITYSTPEEADSAMAASPHVVDGHNVELKRAVARQDADNPEVLANVKKIFVGGVQD 358
Query: 148 EISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKE 327
+ + + ++FS+FG + + E+ DK +++GF F+ F + T TI G +
Sbjct: 359 HVEAEHLTDYFSQFGAVEKAEIISDKLTGKKRGFGFVFFVDTDSATKAVLTRYHTISGNK 418
Query: 328 VDVKRATPKPD 360
V+ K+A K +
Sbjct: 419 VEAKKAMTKQE 429
Score = 58.0 bits (134), Expect = 6e-08
Identities = 25/80 (31%), Positives = 45/80 (56%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+FVGGL+ + DD +R F +FGT+ + + +K + + F F+T+ + + + +
Sbjct: 6 KLFVGGLNVDTDDDGLRKHFEQFGTLTDCVVVVNKQVQRSRCFGFVTYSTPEEADSAMAA 65
Query: 301 PKRTIGGKEVDVKRATPKPD 360
T+ G V+VKRA + D
Sbjct: 66 RPHTVDGNPVEVKRAVARED 85
>UniRef50_UPI000156016B Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 223
Score = 77.8 bits (183), Expect = 7e-14
Identities = 43/119 (36%), Positives = 67/119 (56%), Gaps = 4/119 (3%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA----KARHGKIFVGGLSSEISDDEI 168
RG FI+FK S++KV+ E + +++ KKA K KIFVGGL+ E ++++I
Sbjct: 100 RGLGFILFKDVASVEKVLDQKERKVGGHRMNHKKAVTMKKDPMKKIFVGGLNPEATEEKI 159
Query: 169 RNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 345
R +F +FG I +E D N+R+G FI F+ E+ V +L+ TI G + + A
Sbjct: 160 REYFGKFGEIEAIEFSLDPESNKRQGSVFIAFKEEEPVRSILE-KFHTISGSKCQMDMA 217
>UniRef50_Q8W555 Cluster: AT3g07810/F17A17_15; n=11;
Magnoliophyta|Rep: AT3g07810/F17A17_15 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 494
Score = 77.8 bits (183), Expect = 7e-14
Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 23/141 (16%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-------------------- 120
RGF F+VF P ++ +++ +H I+ + V+ KKA R
Sbjct: 47 RGFGFVVFADP-AVAEIVITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPG 105
Query: 121 ---KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 291
KIFVGGL S +++ + + +F +FGT +V + +D + +GF FIT++SE+ V +
Sbjct: 106 RTRKIFVGGLPSSVTESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKV 165
Query: 292 LKTPKRTIGGKEVDVKRATPK 354
L + GK V+VKRA PK
Sbjct: 166 LLKTFHELNGKMVEVKRAVPK 186
Score = 66.9 bits (156), Expect = 1e-10
Identities = 27/82 (32%), Positives = 54/82 (65%)
Frame = +1
Query: 115 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 294
+GK+F+GG+S + +++ ++ +FS FG ++E + D+T + +GF F+ F ++ V +++
Sbjct: 5 NGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVF-ADPAVAEIV 63
Query: 295 KTPKRTIGGKEVDVKRATPKPD 360
T K I G+ V+ K+A P+ D
Sbjct: 64 ITEKHNIDGRLVEAKKAVPRDD 85
>UniRef50_Q13151 Cluster: Heterogeneous nuclear ribonucleoprotein
A0; n=22; Mammalia|Rep: Heterogeneous nuclear
ribonucleoprotein A0 - Homo sapiens (Human)
Length = 305
Score = 77.4 bits (182), Expect = 9e-14
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 11/131 (8%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR--------HGKI---FVGGLSS 147
R F F+ + E D MAA H ++ V+ K+A +R H K+ FVGGL
Sbjct: 48 RCFGFVTYSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKG 107
Query: 148 EISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKE 327
++++ ++ FS+FGT+ + E+ DK +++GF F+ F++ + I G
Sbjct: 108 DVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHR 167
Query: 328 VDVKRATPKPD 360
V+VK+A PK D
Sbjct: 168 VEVKKAVPKED 178
Score = 48.0 bits (109), Expect = 6e-05
Identities = 20/80 (25%), Positives = 42/80 (52%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+F+GGL+ + S+ +R F FGT+ + + + + + F F+T+ + + + +
Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAMAA 67
Query: 301 PKRTIGGKEVDVKRATPKPD 360
+ G V++KRA + D
Sbjct: 68 SPHAVDGNTVELKRAVSRED 87
Score = 31.9 bits (69), Expect = 4.5
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGG 138
RGF F+ F+ ++ DK H I +V+ KKA + I+ GG
Sbjct: 139 RGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE-DIYSGG 183
>UniRef50_A4V6N1 Cluster: HnRNP A2/B1 protein; n=1; Dugesia
japonica|Rep: HnRNP A2/B1 protein - Dugesia japonica
(Planarian)
Length = 386
Score = 77.0 bits (181), Expect = 1e-13
Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 11/126 (8%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----------KIFVGGLSS 147
RGF F+VFK ES+D+ A H + K VD K+A + +IF+GG+
Sbjct: 59 RGFGFVVFKEAESVDRCQAERPHQLLGKIVDTKRAMPKEESLNPDIHCNSKRIFIGGIRR 118
Query: 148 EISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKE 327
++D+++++FS FG I++ + D +GF FITF +V+ ++ + I
Sbjct: 119 FFTEDDLKDYFSTFGEIVDCTIKRDNVSGLSRGFAFITFTDRDIVDKVILSKPHAIRHCI 178
Query: 328 VDVKRA 345
VDVK+A
Sbjct: 179 VDVKKA 184
Score = 64.1 bits (149), Expect = 9e-10
Identities = 30/80 (37%), Positives = 48/80 (60%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KIFVGGL + ++ ++R +FS++G + +V DKT N+ +GF F+ F+ + V+
Sbjct: 19 KIFVGGLPPQTTESDMRQYFSKYGDVCDVVAMRDKTGNKSRGFGFVVFKEAESVDRCQAE 78
Query: 301 PKRTIGGKEVDVKRATPKPD 360
+ GK VD KRA PK +
Sbjct: 79 RPHQLLGKIVDTKRAMPKEE 98
>UniRef50_Q7XDI5 Cluster: RNA recognition motif family protein,
expressed; n=5; Magnoliophyta|Rep: RNA recognition motif
family protein, expressed - Oryza sativa subsp. japonica
(Rice)
Length = 464
Score = 75.8 bits (178), Expect = 3e-13
Identities = 34/82 (41%), Positives = 53/82 (64%)
Frame = +1
Query: 109 ARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVND 288
AR KIFVGGL S +++DE R +F +G + +V + +D+ + +GF FITF++E V+
Sbjct: 125 ARTKKIFVGGLPSNLTEDEFRQYFQTYGVVTDVVVMYDQNTQRPRGFGFITFDAEDAVDR 184
Query: 289 LLKTPKRTIGGKEVDVKRATPK 354
+L + GK V+VKRA P+
Sbjct: 185 VLHKTFHDLSGKMVEVKRALPR 206
Score = 59.7 bits (138), Expect = 2e-08
Identities = 27/81 (33%), Positives = 49/81 (60%)
Frame = +1
Query: 118 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 297
GK+F+GG+S E +++++R+ F+ +G + + + DK + +GF F+ F V+ L
Sbjct: 6 GKLFIGGISWETTEEKLRDHFAAYGDVSQAAVMRDKLTGRPRGFGFVVFSDPSSVDAALV 65
Query: 298 TPKRTIGGKEVDVKRATPKPD 360
P T+ G+ VDVKRA + +
Sbjct: 66 DP-HTLDGRTVDVKRALSREE 85
Score = 37.1 bits (82), Expect = 0.12
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 114
RGF F+VF P S+D + HT++ + VD K+A +R
Sbjct: 47 RGFGFVVFSDPSSVDAAL-VDPHTLDGRTVDVKRALSR 83
Score = 35.5 bits (78), Expect = 0.37
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 114
RGF FI F A +++D+V+ H ++ K V+ K+A R
Sbjct: 169 RGFGFITFDAEDAVDRVLHKTFHDLSGKMVEVKRALPR 206
>UniRef50_Q54D98 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 687
Score = 75.8 bits (178), Expect = 3e-13
Identities = 46/123 (37%), Positives = 66/123 (53%), Gaps = 8/123 (6%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA--------KARHGKIFVGGLSSEIS 156
RGF F+ F P ID+V+ H+I K V+ ++A + + K+FVGGL I+
Sbjct: 148 RGFGFVTFVDPSVIDEVILIN-HSIEGKNVEIRRAIPKEEMTEEPKKQKLFVGGLPKHIT 206
Query: 157 DDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDV 336
D+ N+FSEFG I E + +K KGF FI F+ E V +L + I GK VD+
Sbjct: 207 SDDFNNYFSEFGEISEYNLLTEK-NGTIKGFGFICFKDESVNEIILNEQQHIILGKRVDI 265
Query: 337 KRA 345
+ A
Sbjct: 266 RIA 268
Score = 59.3 bits (137), Expect = 3e-08
Identities = 29/86 (33%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +1
Query: 106 KARHGKIFVGGLSSEISDDEIRNFFSEFGTILE-VEMPFDKTKNQRKGFCFITFESEQVV 282
K+ GKIFVGGL S++ ++++FS FG + E + + + ++ +GF F+TF V+
Sbjct: 102 KSISGKIFVGGLLKTSSNEILKDYFSNFGEVKESIVIKATEKASKSRGFGFVTFVDPSVI 161
Query: 283 NDLLKTPKRTIGGKEVDVKRATPKPD 360
++++ +I GK V+++RA PK +
Sbjct: 162 DEVILI-NHSIEGKNVEIRRAIPKEE 186
>UniRef50_Q26658 Cluster: Stage specific activator protein; n=3;
Strongylocentrotus purpuratus|Rep: Stage specific
activator protein - Strongylocentrotus purpuratus
(Purple sea urchin)
Length = 382
Score = 75.4 bits (177), Expect = 4e-13
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 12/130 (9%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG------------KIFVGGLS 144
+GF F+ F P +D V H + K +D K+ KAR K+FVGG+S
Sbjct: 48 KGFGFVTFADPACVDDVTNEKNHNLEGKGLDCKRCKARGSEKRMGPGDQRTKKVFVGGIS 107
Query: 145 SEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGK 324
+ + +++ F G + +V + D + +GF F+T +SE+ V L++ + GK
Sbjct: 108 QQATKEDLYELFRSHGNVEDVHIMNDTDTGKHRGFGFVTLDSEEAVEKLVRMHHLELKGK 167
Query: 325 EVDVKRATPK 354
+++K+A PK
Sbjct: 168 SMEIKKAQPK 177
Score = 59.3 bits (137), Expect = 3e-08
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +1
Query: 118 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFESEQVVNDLL 294
GKIFVGG+ D R +F +FG + ++ + DK K Q KGF F+TF V+D+
Sbjct: 6 GKIFVGGVDRNTHADTFRAYFEKFGKLSDIILMMDKDKPGQNKGFGFVTFADPACVDDVT 65
Query: 295 KTPKRTIGGKEVDVKR 342
+ GK +D KR
Sbjct: 66 NEKNHNLEGKGLDCKR 81
>UniRef50_UPI0000E4626F Cluster: PREDICTED: similar to heterogeneous
nuclear ribonucleoprotein A2/B1 isoform 1; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
heterogeneous nuclear ribonucleoprotein A2/B1 isoform 1
- Strongylocentrotus purpuratus
Length = 360
Score = 74.5 bits (175), Expect = 6e-13
Identities = 43/131 (32%), Positives = 75/131 (57%), Gaps = 11/131 (8%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGE---HTINNKKVDPKKAKARHGK--------IFVGGLSS 147
+GF F+ F + + ++KVM A + H ++N+ VD ++A AR K FVGG+
Sbjct: 54 KGFGFVTFASRKEVNKVMGARKENPHRLDNRAVDVRRAMARDEKGPKNPSFKCFVGGIPK 113
Query: 148 EISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKE 327
E +++E+R +FS+FG I+E+ + + KGF FIT++ V+ ++ I GK+
Sbjct: 114 ETTEEELRAYFSQFGQIVELAL------HLSKGFSFITYDDTDCVDQIVMKKFHHINGKK 167
Query: 328 VDVKRATPKPD 360
V+ K+A K +
Sbjct: 168 VEGKKAYSKEE 178
Score = 58.0 bits (134), Expect = 6e-08
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Frame = +1
Query: 100 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQV 279
K + K+F+GGLS +D I+ +F +FG I++ + D T + KGF F+TF S +
Sbjct: 7 KEPEQERKLFLGGLSYNTKEDNIKEYFGQFGEIVDCCVIKDPTSLKSKGFGFVTFASRKE 66
Query: 280 VNDLLKTPKRT---IGGKEVDVKRATPKPD 360
VN ++ K + + VDV+RA + +
Sbjct: 67 VNKVMGARKENPHRLDNRAVDVRRAMARDE 96
>UniRef50_Q4SEZ3 Cluster: Chromosome 1 SCAF14609, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 1
SCAF14609, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 476
Score = 74.1 bits (174), Expect = 9e-13
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 22/131 (16%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK----------KAKARHG---------- 120
RGF F+ FK P + V+ H ++ + +DPK K++ + G
Sbjct: 41 RGFGFVKFKDPNCVRTVLETKPHNLDGRNIDPKPCTPRGMQPEKSRTKEGWKGSKADSNK 100
Query: 121 --KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 294
KIFVGG+ + E+R++F+ FG + EV M +D K + +GF FITFE+EQ V+ +
Sbjct: 101 SKKIFVGGIPHNCGEPELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAV 160
Query: 295 KTPKRTIGGKE 327
I GK+
Sbjct: 161 NMHFHDIMGKK 171
Score = 68.5 bits (160), Expect = 4e-11
Identities = 28/78 (35%), Positives = 48/78 (61%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+FVGGL + + +RN+FS++G +++ + DKT NQ +GF F+ F+ V +L+T
Sbjct: 1 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET 60
Query: 301 PKRTIGGKEVDVKRATPK 354
+ G+ +D K TP+
Sbjct: 61 KPHNLDGRNIDPKPCTPR 78
>UniRef50_Q94AC3 Cluster: AT4g36960/C7A10_400; n=11;
Magnoliophyta|Rep: AT4g36960/C7A10_400 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 379
Score = 73.7 bits (173), Expect = 1e-12
Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 9/129 (6%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------KIFVGGLSSEI 153
RGF ++ F + E + GEH + N+ ++ K A + +IFV + S +
Sbjct: 44 RGFGYVTFASAEDAKNALK-GEHFLGNRILEVKVATPKEEMRQPAKKVTRIFVARIPSSV 102
Query: 154 SDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVD 333
S+ + R+ F +G I ++ MP D Q +G FITF S V DL++ +GG V
Sbjct: 103 SESDFRSHFERYGEITDLYMPKDYNSKQHRGIGFITFSSADSVEDLME-DTHDLGGTTVA 161
Query: 334 VKRATPKPD 360
V RATPK D
Sbjct: 162 VDRATPKED 170
Score = 58.4 bits (135), Expect = 5e-08
Identities = 31/77 (40%), Positives = 45/77 (58%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KIFVG L E S D++R++F FG I + +P D ++ +GF F+TF +E V D +
Sbjct: 241 KIFVGRLPQEASVDDLRDYFGRFGHIQDAYIPKDPKRSGHRGFGFVTF-AENGVADRVAR 299
Query: 301 PKRTIGGKEVDVKRATP 351
I G+EV + ATP
Sbjct: 300 RSHEICGQEVAIDSATP 316
Score = 47.2 bits (107), Expect = 1e-04
Identities = 23/80 (28%), Positives = 48/80 (60%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+ V G+ +I D ++++ S+FG + + + D++ + +GF ++TF S + + LK
Sbjct: 4 KLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNALK- 62
Query: 301 PKRTIGGKEVDVKRATPKPD 360
+ +G + ++VK ATPK +
Sbjct: 63 GEHFLGNRILEVKVATPKEE 82
>UniRef50_A7RG33 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 177
Score = 73.7 bits (173), Expect = 1e-12
Identities = 36/136 (26%), Positives = 82/136 (60%), Gaps = 18/136 (13%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKK-----------AKARHGKIFVGGLSS 147
RGF F+ +++ +S+++V+ +H +++++++PK+ A ++ KIFVGGL+S
Sbjct: 39 RGFGFVTYESSDSVNEVLKKKDHVLDDREIEPKRSVPRDESGAPEAMSKTRKIFVGGLAS 98
Query: 148 EISDDEIRNFFSE------FGTILEVEMPFDKTKNQR-KGFCFITFESEQVVNDLLKTPK 306
+++I+ +F+ G +++V++ D+ +R +GF F+TF+++++V +
Sbjct: 99 TTVEEDIKEYFNSLCRKNGMGEVIDVDLKRDRDNPKRIRGFAFVTFDNDEIVEKVCAMKY 158
Query: 307 RTIGGKEVDVKRATPK 354
I K+ +VK+A P+
Sbjct: 159 HEIRMKQCEVKKAEPQ 174
Score = 62.5 bits (145), Expect = 3e-09
Identities = 27/80 (33%), Positives = 52/80 (65%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KIF+GGL+ +++ ++++FS++GTI V+ K + +GF F+T+ES VN++LK
Sbjct: 1 KIFIGGLNWNTTEEGLKDYFSQWGTI--VDCVIMKRDGRSRGFGFVTYESSDSVNEVLKK 58
Query: 301 PKRTIGGKEVDVKRATPKPD 360
+ +E++ KR+ P+ +
Sbjct: 59 KDHVLDDREIEPKRSVPRDE 78
>UniRef50_Q22037 Cluster: Heterogeneous nuclear ribonucleoprotein
A1; n=5; Caenorhabditis|Rep: Heterogeneous nuclear
ribonucleoprotein A1 - Caenorhabditis elegans
Length = 346
Score = 73.7 bits (173), Expect = 1e-12
Identities = 35/80 (43%), Positives = 50/80 (62%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KIFVGGL+S +DD +R F+S+FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 301 PKRTIGGKEVDVKRATPKPD 360
I GK VD KRA P+ D
Sbjct: 84 RPHIIDGKTVDPKRAVPRDD 103
Score = 73.3 bits (172), Expect = 1e-12
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 11/131 (8%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK-----------IFVGGLSS 147
RGF F+ F +D M H I+ K VDPK+A R K ++V G+
Sbjct: 64 RGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVRE 123
Query: 148 EISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKE 327
+ ++D + +F+++GT+ + E+ DK + +GF F+TF+ V+ + + G
Sbjct: 124 DHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHR 183
Query: 328 VDVKRATPKPD 360
DV++ K +
Sbjct: 184 CDVRKGLSKDE 194
>UniRef50_Q8CD63 Cluster: 13 days embryo male testis cDNA, RIKEN
full-length enriched library, clone:6030413L18
product:Musashi homolog 2 (Drosophila), full insert
sequence; n=3; Deuterostomia|Rep: 13 days embryo male
testis cDNA, RIKEN full-length enriched library,
clone:6030413L18 product:Musashi homolog 2 (Drosophila),
full insert sequence - Mus musculus (Mouse)
Length = 192
Score = 72.1 bits (169), Expect = 3e-12
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 9/91 (9%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG---------KIFVGGLSSEI 153
RGF F+ F P S+DKV+ H +++K +DPK A R KIFVGGLS+
Sbjct: 62 RGFGFVTFTDPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANT 121
Query: 154 SDDEIRNFFSEFGTILEVEMPFDKTKNQRKG 246
++++ +F +FG + + + FDKT N+ +G
Sbjct: 122 VVEDVKQYFEQFGKVEDAMLMFDKTTNRHRG 152
Score = 65.3 bits (152), Expect = 4e-10
Identities = 31/79 (39%), Positives = 47/79 (59%)
Frame = +1
Query: 118 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 297
GK+F+GGLS + S D +R++FS+FG I E + D T + +GF F+TF V+ +L
Sbjct: 21 GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDPASVDKVLG 80
Query: 298 TPKRTIGGKEVDVKRATPK 354
P + K +D K A P+
Sbjct: 81 QPHHELDSKTIDPKVAFPR 99
>UniRef50_UPI00005A4DCF Cluster: PREDICTED: similar to Heterogeneous
nuclear ribonucleoprotein A1 (Helix-destabilizing
protein) (Single-strand binding protein) (hnRNP core
protein A1) (HDP-1) (Topoisomerase-inhibitor
suppressed); n=2; Canis lupus familiaris|Rep: PREDICTED:
similar to Heterogeneous nuclear ribonucleoprotein A1
(Helix-destabilizing protein) (Single-strand binding
protein) (hnRNP core protein A1) (HDP-1)
(Topoisomerase-inhibitor suppressed) - Canis familiaris
Length = 433
Score = 71.7 bits (168), Expect = 5e-12
Identities = 34/131 (25%), Positives = 68/131 (51%), Gaps = 11/131 (8%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----------KIFVGGLSS 147
RGF F+++ E +D M A H ++ + V+ K+A ++ KIFVGG+
Sbjct: 96 RGFGFVMYATMEEVDAAMKARPHKVDGRVVERKRAVSQEDSQRPGAHLTVKKIFVGGIKE 155
Query: 148 EISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKE 327
+ + +R +F ++G I +E+ D+ +++GF F+TF+ V+ ++ T+
Sbjct: 156 DTEEHHLRYYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNDHN 215
Query: 328 VDVKRATPKPD 360
+V++A K +
Sbjct: 216 CEVRKALSKQE 226
Score = 41.9 bits (94), Expect = 0.004
Identities = 19/78 (24%), Positives = 41/78 (52%)
Frame = +1
Query: 127 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 306
F+ GLS + + + +R+ F ++G +++ D +GF F+ + + + V+ +K
Sbjct: 58 FISGLSFKTTYETLRSHFEQWGMLIDCVAMRDPNTKLSRGFGFVMYATMEEVDAAMKARP 117
Query: 307 RTIGGKEVDVKRATPKPD 360
+ G+ V+ KRA + D
Sbjct: 118 HKVDGRVVERKRAVSQED 135
>UniRef50_A7ART3 Cluster: Ribonucleoprotein, putative; n=1; Babesia
bovis|Rep: Ribonucleoprotein, putative - Babesia bovis
Length = 306
Score = 70.5 bits (165), Expect = 1e-11
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 12/131 (9%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA----KARH--------GKIFVGGLS 144
RGF F+ F ++ V+A H I+N D K+A +AR +IFVGG++
Sbjct: 73 RGFGFVTFSNDAALKAVLAVS-HKIDNVLADVKQAIKKERARDLLPTREEVNRIFVGGIA 131
Query: 145 SEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGK 324
IS+DE +++F ++G++L DK+ N+ +GF F+ +E V+ + T G+
Sbjct: 132 DNISEDEFKDYFGKYGSVLNYNFIVDKSTNKPRGFGFVVYEDPADVDKAI--GHHTKLGR 189
Query: 325 EVDVKRATPKP 357
+ KRA P+P
Sbjct: 190 NCEAKRAQPRP 200
Score = 58.8 bits (136), Expect = 3e-08
Identities = 28/78 (35%), Positives = 47/78 (60%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KIF GGL+ + + +RN+FS++GT++ E+ DKT + +GF F+TF ++ + +L
Sbjct: 33 KIFAGGLNRSTTAETLRNYFSKYGTVVHSEIVADKTTGRSRGFGFVTFSNDAALKAVLAV 92
Query: 301 PKRTIGGKEVDVKRATPK 354
+ I DVK+A K
Sbjct: 93 SHK-IDNVLADVKQAIKK 109
>UniRef50_Q9SM01 Cluster: RNA binding protein; n=2; Arabidopsis
thaliana|Rep: RNA binding protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 381
Score = 69.7 bits (163), Expect = 2e-11
Identities = 32/82 (39%), Positives = 52/82 (63%)
Frame = +1
Query: 109 ARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVND 288
+R KIFVGGLSS +++E +++F FG +V + D N+ +GF F+T++SE V
Sbjct: 117 SRTKKIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRPRGFGFVTYDSEDSVEV 176
Query: 289 LLKTPKRTIGGKEVDVKRATPK 354
++++ + K V+VKRA PK
Sbjct: 177 VMQSNFHELSDKRVEVKRAIPK 198
Score = 55.6 bits (128), Expect = 3e-07
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE-QVVNDLLK 297
K+FVGG++ E S++ ++ +FS +G +LE + +K + +GF F+ F ++ VV L
Sbjct: 7 KLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDVVKALRD 66
Query: 298 TPKRTIGGKEVDVKRATPK 354
T I GK VDV++A K
Sbjct: 67 T--HFILGKPVDVRKAIRK 83
>UniRef50_A2YHR7 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 377
Score = 69.7 bits (163), Expect = 2e-11
Identities = 28/78 (35%), Positives = 49/78 (62%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+F+GGL I+++E + +F FGT+ +V + +D N+ +GF F+TF+SE+ V +++
Sbjct: 145 KVFIGGLRDNITEEEFKTYFESFGTVTDVVVIYDSMTNRSRGFGFVTFDSEEAVRKVIEH 204
Query: 301 PKRTIGGKEVDVKRATPK 354
+ G V+ K A PK
Sbjct: 205 SFHDLKGTRVEAKIAIPK 222
Score = 56.4 bits (130), Expect = 2e-07
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL-- 294
K+FVGG+ + + E+R F ++G + V + DK +GF F+ FE E+ L
Sbjct: 21 KLFVGGIPTSAQEAELRGHFGQYGAVRSVIVMRDKETGHGRGFGFVEFEEEEDAARALGD 80
Query: 295 -KTPKRTIGGKEVDVKRATPKP 357
+ P+ I G+ VDVKRA +P
Sbjct: 81 GEHPRHLICGRVVDVKRARARP 102
Score = 31.1 bits (67), Expect = 7.9
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGE---HTINNKKVDPKKAKAR 114
RGF F+ F+ E + + GE H I + VD K+A+AR
Sbjct: 61 RGFGFVEFEEEEDAARALGDGEHPRHLICGRVVDVKRARAR 101
>UniRef50_A4RXB1 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 218
Score = 69.3 bits (162), Expect = 2e-11
Identities = 32/78 (41%), Positives = 48/78 (61%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KIFVGGL + + +RNFFS+FG ++EV + D +Q +GF FITF+ + +L+
Sbjct: 14 KIFVGGLDRTVDEGVVRNFFSQFGPVMEVLVMRDPHNHQSRGFGFITFQRDDSAKQVLQN 73
Query: 301 PKRTIGGKEVDVKRATPK 354
+ GK V+VK A P+
Sbjct: 74 RYHDMLGKRVEVKSAVPR 91
>UniRef50_Q02926 Cluster: Ribonucleoprotein RB97D; n=7;
Sophophora|Rep: Ribonucleoprotein RB97D - Drosophila
melanogaster (Fruit fly)
Length = 471
Score = 68.9 bits (161), Expect = 3e-11
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----------KIFVGGLSS 147
RGF FI + +D+ H I+ K V+ K+A R K+FVGGL
Sbjct: 73 RGFGFITYTKSLMVDRAQENRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKD 132
Query: 148 EISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKE 327
++ +R +F +FG ++ V++ DKT +R+GF F+ F+ V+ + + I
Sbjct: 133 NHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQHAIKYVH 192
Query: 328 VDVKRA 345
VDVK++
Sbjct: 193 VDVKKS 198
Score = 58.0 bits (134), Expect = 6e-08
Identities = 24/80 (30%), Positives = 48/80 (60%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+F+GGL+ +++ ++ F+ ++G +++V + D + +GF FIT+ +V+ +
Sbjct: 33 KLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQEN 92
Query: 301 PKRTIGGKEVDVKRATPKPD 360
I GK V+ KRA P+P+
Sbjct: 93 RPHIIDGKTVEAKRALPRPE 112
>UniRef50_UPI0000F1F0C3 Cluster: PREDICTED: similar to LOC561459
protein; n=1; Danio rerio|Rep: PREDICTED: similar to
LOC561459 protein - Danio rerio
Length = 329
Score = 68.5 bits (160), Expect = 4e-11
Identities = 28/79 (35%), Positives = 48/79 (60%)
Frame = +1
Query: 118 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 297
GK+FVGGL + + +RN+FS++G +++ + DK+ NQ +GF F+ F+ V +L
Sbjct: 23 GKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTVLD 82
Query: 298 TPKRTIGGKEVDVKRATPK 354
T + G+ +D K TP+
Sbjct: 83 TKPHNLDGRNIDPKPCTPR 101
Score = 34.7 bits (76), Expect = 0.64
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 114
RGF F+ FK P + V+ H ++ + +DPK R
Sbjct: 64 RGFGFVKFKDPNCVRTVLDTKPHNLDGRNIDPKPCTPR 101
>UniRef50_Q5CS11 Cluster: Musashi. RRM domain containing protein,
splicing related; n=2; Cryptosporidium|Rep: Musashi. RRM
domain containing protein, splicing related -
Cryptosporidium parvum Iowa II
Length = 507
Score = 67.7 bits (158), Expect = 7e-11
Identities = 33/78 (42%), Positives = 51/78 (65%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KIF GGLS ++ +R FS +G I++ + +KT + +GF FITF SE+ V+ +L +
Sbjct: 24 KIFCGGLSDVTTNASLRTHFSPYGEIVDSVVLTEKTTGRSRGFGFITFASEESVDAVLSS 83
Query: 301 PKRTIGGKEVDVKRATPK 354
P + + GKE+D KRA P+
Sbjct: 84 P-QIVDGKEIDCKRAVPR 100
Score = 58.8 bits (136), Expect = 3e-08
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK- 297
KIFVGGL +D+++R F ++GTI + + D+ N+ +GF F+ +ES V ++++
Sbjct: 167 KIFVGGLPQSCTDEKLREHFGKYGTIKNLSVMVDRDTNRHRGFGFVEYESPDAVEEVMRH 226
Query: 298 TPKRTIGGKEVDVKRATPK 354
I K V+ K+A P+
Sbjct: 227 YYDHQIDNKWVECKKALPR 245
Score = 35.5 bits (78), Expect = 0.37
Identities = 16/39 (41%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAG-EHTINNKKVDPKKAKAR 114
RGF F+ +++P+++++VM +H I+NK V+ KKA R
Sbjct: 207 RGFGFVEYESPDAVEEVMRHYYDHQIDNKWVECKKALPR 245
Score = 33.9 bits (74), Expect = 1.1
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 114
RGF FI F + ES+D V+++ + ++ K++D K+A R
Sbjct: 64 RGFGFITFASEESVDAVLSSPQ-IVDGKEIDCKRAVPR 100
>UniRef50_Q4U8S8 Cluster: RNA-binding protein, putative; n=2;
Theileria|Rep: RNA-binding protein, putative - Theileria
annulata
Length = 513
Score = 67.3 bits (157), Expect = 1e-10
Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 5/124 (4%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKK-----AKARHGKIFVGGLSSEISDDE 165
RGF F+ K + V H ++ K+VD + A + KIFVGGLS ++++
Sbjct: 168 RGFGFVTLKVQPNTMSVFK-DTHVVSGKRVDVRAMQTDVAASLRKKIFVGGLSKALNEEM 226
Query: 166 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 345
++ +FS+FG + +V + + +GF FI F +E+ LK P + G +VDV+ A
Sbjct: 227 LQEYFSKFGEVDKVTI-MRQLDGTSRGFGFIVFMTEEGATGSLKNPTHFVYGNKVDVRAA 285
Query: 346 TPKP 357
+P
Sbjct: 286 ETRP 289
Score = 44.0 bits (99), Expect = 0.001
Identities = 22/73 (30%), Positives = 37/73 (50%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K FVGGL + E+ F+++G IL ++ D + +GF F+T + + + K
Sbjct: 128 KFFVGGLHPNTDEGELSAHFAKYGQILASQVMRDMATGRHRGFGFVTLKVQPNTMSVFK- 186
Query: 301 PKRTIGGKEVDVK 339
+ GK VDV+
Sbjct: 187 DTHVVSGKRVDVR 199
>UniRef50_A7APD8 Cluster: RNA recognition motif domain containing
protein; n=1; Babesia bovis|Rep: RNA recognition motif
domain containing protein - Babesia bovis
Length = 362
Score = 67.3 bits (157), Expect = 1e-10
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 5/120 (4%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKK-----AKARHGKIFVGGLSSEISDDE 165
RGF F+ E+ + + + EH +N K VD ++ A KIFVGGL +S+
Sbjct: 122 RGFGFVTLYVQENTENLFS-DEHNVNGKHVDVRRMQNDAASNMKRKIFVGGLPKSLSEQM 180
Query: 166 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 345
++ FF FG + +V + + +GF F+ F + V +L++P + G +VDV+ A
Sbjct: 181 LKTFFERFGAVEKVTI-MRQYDGSSRGFGFVIFAVDGAVEKVLESPSHFVYGSKVDVRAA 239
Score = 45.2 bits (102), Expect = 5e-04
Identities = 20/74 (27%), Positives = 39/74 (52%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K FVGGL + + + F ++G ++ ++ D + +GF F+T ++ +L +
Sbjct: 82 KFFVGGLHPTVDEGMLTEHFMKYGRVITAQVMRDYNSGRSRGFGFVTLYVQENTENLF-S 140
Query: 301 PKRTIGGKEVDVKR 342
+ + GK VDV+R
Sbjct: 141 DEHNVNGKHVDVRR 154
Score = 36.7 bits (81), Expect = 0.16
Identities = 17/65 (26%), Positives = 35/65 (53%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFF 180
RGF F++F +++KV+ + H + KVD + A++R K L ++ + +
Sbjct: 205 RGFGFVIFAVDGAVEKVLESPSHFVYGSKVDVRAAESR-SKQAAARLENQYKNMMRHGYN 263
Query: 181 SEFGT 195
+++GT
Sbjct: 264 ADYGT 268
>UniRef50_A3FQK0 Cluster: RNA recognition motif (RRM)-containing
protein; n=2; Cryptosporidium|Rep: RNA recognition motif
(RRM)-containing protein - Cryptosporidium parvum Iowa
II
Length = 202
Score = 67.3 bits (157), Expect = 1e-10
Identities = 30/79 (37%), Positives = 47/79 (59%)
Frame = +1
Query: 118 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 297
GKIFVGGLS +++ + +F +FG IL+ + +D + +GF F+TF+ + V +
Sbjct: 8 GKIFVGGLSQQVTSSILMEYFLQFGVILDAVVMYDNVSGRSRGFGFVTFKDPKTVEIVQN 67
Query: 298 TPKRTIGGKEVDVKRATPK 354
I GK VD KRA+P+
Sbjct: 68 ITPHIIMGKVVDCKRASPR 86
Score = 58.4 bits (135), Expect = 5e-08
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Frame = +1
Query: 64 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRK 243
E+T N K KIFVGGL +++ +E + +F FG I + + DK + +
Sbjct: 103 ENTPENYNNAVTKGIKNVSKIFVGGLP-DLTLEEFKIYFQRFGNIKDAVLITDKNNGRPR 161
Query: 244 GFCFITFESEQVVNDLLK-TPKRTIGGKEVDVKRATPK 354
GF F+TFES VN++ K + GK V+ KRA P+
Sbjct: 162 GFGFVTFESVDAVNNVTKFYSNHYLKGKWVECKRALPR 199
>UniRef50_A7SSE1 Cluster: Predicted protein; n=3; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 164
Score = 66.9 bits (156), Expect = 1e-10
Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 13/123 (10%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR-------------HGKIFVGGL 141
R F FI F+ P + VM H ++ K +DPK A R KIFVGGL
Sbjct: 42 RCFGFITFRDPSVVQNVMDDKPHQLDGKMIDPKPAVPRGPGQGPPQGNQNNEFKIFVGGL 101
Query: 142 SSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGG 321
+ S ++ ++F+ +G ++ V + D + +GF F+TFES+ V I G
Sbjct: 102 AHSTSKQDLEDYFTAYGKVVSVNLMVDPQTQKMRGFGFVTFESKDSVTKAADEHYHQING 161
Query: 322 KEV 330
K V
Sbjct: 162 KTV 164
Score = 50.4 bits (115), Expect = 1e-05
Identities = 23/78 (29%), Positives = 40/78 (51%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KIFVGGL+ ++ +F ++G + + + D + + F FITF VV +++
Sbjct: 2 KIFVGGLAISTDSAGLQGYFEKYGEVTDCVLMTDPVTKRSRCFGFITFRDPSVVQNVMDD 61
Query: 301 PKRTIGGKEVDVKRATPK 354
+ GK +D K A P+
Sbjct: 62 KPHQLDGKMIDPKPAVPR 79
>UniRef50_A7SIE8 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 184
Score = 66.9 bits (156), Expect = 1e-10
Identities = 40/129 (31%), Positives = 71/129 (55%), Gaps = 14/129 (10%)
Frame = +1
Query: 1 RGFAFIVFK-APESIDKVMAAGE-HTINNKKVDPKKAKARHG----------KIFVGGLS 144
R F F+ F + ID ++ E H+I+NK+V+ K+A R K+F+GGL
Sbjct: 56 RKFCFVEFSNGSDIIDNIVFNFESHSIDNKQVEVKRAMPRDDPNELAHVRTKKLFIGGLK 115
Query: 145 SEISDDEIRNFFSEFGTI--LEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIG 318
E S+++++ + LE++M D+ N+ KG+CF+ F +E +V+ L +
Sbjct: 116 DEHSEEDVKTALAPLSPFAPLEIKMVRDRETNKFKGYCFVNFPNEHIVDKLYLVRHIQVK 175
Query: 319 GKEVDVKRA 345
GK+V++K+A
Sbjct: 176 GKDVEMKKA 184
Score = 48.8 bits (111), Expect = 4e-05
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEF--GTILEV-EMPFDKT-KNQRKGFCFITFE--SEQVV 282
K+FVGGL+ + +++ +R +F F G+ +V + KT + + + FCF+ F S+ +
Sbjct: 12 KLFVGGLNEDTTEETVRAYFKSFCEGSEADVSSVSLAKTPEGKSRKFCFVEFSNGSDIID 71
Query: 283 NDLLKTPKRTIGGKEVDVKRATPKPD 360
N + +I K+V+VKRA P+ D
Sbjct: 72 NIVFNFESHSIDNKQVEVKRAMPRDD 97
>UniRef50_Q75KB4 Cluster: Putative RNA binding protein; n=4; Oryza
sativa|Rep: Putative RNA binding protein - Oryza sativa
subsp. japonica (Rice)
Length = 291
Score = 65.7 bits (153), Expect = 3e-10
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 27/145 (18%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGE---HTINNKKVDPKKAKARHG----------------- 120
RGF F+ F + + +A E H +KVD K+A+ RH
Sbjct: 46 RGFGFVEFADEAATLRALADDEMPNHVFRGRKVDVKRAERRHDHKQTSPSIKNQNDSVQK 105
Query: 121 -------KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQV 279
K+FVGGL ++ ++ ++F +FGTI + + ++T N+ +GF FI+F+S +
Sbjct: 106 NQFIFQKKVFVGGLHETVTVKDLISYFEKFGTITDAVVMRNRTTNRARGFGFISFDSHEA 165
Query: 280 VNDLLKTPKRTIGGKEVDVKRATPK 354
V +L + G++V+VK A PK
Sbjct: 166 VCKILLNRFHNLNGRDVEVKIAVPK 190
Score = 49.6 bits (113), Expect = 2e-05
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL-- 294
K+FV GL + + ++R F+ +G ++ + D +GF F+ F E L
Sbjct: 6 KLFVAGLPQQTREGDLRGHFARYGEVVHTRVVLDMASGNSRGFGFVEFADEAATLRALAD 65
Query: 295 -KTPKRTIGGKEVDVKRATPKPD 360
+ P G++VDVKRA + D
Sbjct: 66 DEMPNHVFRGRKVDVKRAERRHD 88
>UniRef50_Q32LZ4 Cluster: Msi2h protein; n=4; Eutheria|Rep: Msi2h
protein - Mus musculus (Mouse)
Length = 193
Score = 65.3 bits (152), Expect = 4e-10
Identities = 31/79 (39%), Positives = 47/79 (59%)
Frame = +1
Query: 118 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 297
GK+F+GGLS + S D +R++FS+FG I E + D T + +GF F+TF V+ +L
Sbjct: 21 GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLG 80
Query: 298 TPKRTIGGKEVDVKRATPK 354
P + K +D K A P+
Sbjct: 81 QPHHELDSKTIDPKVAFPR 99
Score = 42.7 bits (96), Expect = 0.002
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK 123
RGF F+ F P S+DKV+ H +++K +DPK A R +
Sbjct: 62 RGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQ 102
>UniRef50_UPI0000E4A88D Cluster: PREDICTED: similar to MGC88935
protein, partial; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to MGC88935 protein,
partial - Strongylocentrotus purpuratus
Length = 342
Score = 64.9 bits (151), Expect = 5e-10
Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Frame = +1
Query: 10 AFIVFKAPESIDKVMAAGEHTIN--NKKVDPKKAKARHG---KIFVGGLSSEISDDEIRN 174
A+IVF+ + +A+ +N + +VD +H +FVG L+ I D+ +RN
Sbjct: 213 AYIVFEEEQCARAALASNGKIVNKHHMRVDIAGNNKKHDMKRSLFVGNLAFNIDDEAVRN 272
Query: 175 FFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 354
F EFGT+ V + DK KGF ++ FE V LK + G+ + VKRA K
Sbjct: 273 HFEEFGTVEGVRLIRDKATGVGKGFGYVLFEDSSSVQFALKMDGTKLNGRPLRVKRAVKK 332
>UniRef50_UPI0000E4615D Cluster: PREDICTED: similar to heterogeneous
nuclear ribonucleoprotein A3, partial; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
heterogeneous nuclear ribonucleoprotein A3, partial -
Strongylocentrotus purpuratus
Length = 697
Score = 64.9 bits (151), Expect = 5e-10
Identities = 27/78 (34%), Positives = 52/78 (66%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
+IFVGG+ ++ + + F +FG ++EVE+P ++ + +GF F+TF ++++V +++ T
Sbjct: 117 RIFVGGIPENTTEAAMIDAFGKFGEVVEVEIPPNEKNGKPRGFAFVTFATKEIVGEVVAT 176
Query: 301 PKRTIGGKEVDVKRATPK 354
T G++V+VKRA K
Sbjct: 177 KYHTFLGRKVEVKRAIEK 194
Score = 40.7 bits (91), Expect = 0.010
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+F+GGL S+ S+ + F FG I++V M ++ KGF F+TF ++ ++
Sbjct: 17 KLFLGGLRSQSSERHLYEAFLPFGHIVDVLM-VRGPNHKPKGFGFVTFSKAYMMEAVITA 75
Query: 301 ---PKRTIGGKEVDVKR 342
+ + GK V++KR
Sbjct: 76 HPDMRVIVDGKSVEIKR 92
Score = 35.1 bits (77), Expect = 0.48
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 105
RGFAF+ F E + +V+A HT +KV+ K+A
Sbjct: 157 RGFAFVTFATKEIVGEVVATKYHTFLGRKVEVKRA 191
>UniRef50_Q5CT90 Cluster: RRM domain containing protein; n=1;
Cryptosporidium parvum Iowa II|Rep: RRM domain
containing protein - Cryptosporidium parvum Iowa II
Length = 199
Score = 63.7 bits (148), Expect = 1e-09
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +1
Query: 112 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 291
R KIFVG L + S D +R +F +FG I + M DK +GF F+TF S VV+++
Sbjct: 83 RTEKIFVGNLPTTCSQDILRKYFEQFGQISDCVMMCDKKSGIGRGFGFVTFTSTSVVDEI 142
Query: 292 LKT-PKRTIGGKEVDVKRATPK 354
++ + I G+ V+VKRA+P+
Sbjct: 143 IRAYDEHYIDGQWVEVKRASPE 164
>UniRef50_Q8WSM6 Cluster: Putative uncharacterized protein; n=4;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 336
Score = 62.5 bits (145), Expect = 3e-09
Identities = 27/78 (34%), Positives = 46/78 (58%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+F+GGLS + +D+++ N+FS++G +++ + D +GF F+TF S +
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 130
Query: 301 PKRTIGGKEVDVKRATPK 354
+GGK VD KRA P+
Sbjct: 131 RPHKLGGKTVDSKRAIPR 148
>UniRef50_A7SIF0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 190
Score = 62.5 bits (145), Expect = 3e-09
Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK- 297
K+FVGGL+ E +++ +R +F +G + +V + D + +GF ++TF +V ++LK
Sbjct: 15 KLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTFADYKVTRNVLKD 74
Query: 298 ---TPKRTIGGKEVDVKRATPKPD 360
I GKEV+VKRA P+ D
Sbjct: 75 KVENGAHRIDGKEVEVKRAIPRDD 98
Score = 49.2 bits (112), Expect = 3e-05
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 18/136 (13%)
Frame = +1
Query: 1 RGFAFIVF---KAPESI--DKVMAAGEHTINNKKVDPKKAKARHG----------KIFVG 135
RGF ++ F K ++ DKV G H I+ K+V+ K+A R KIFVG
Sbjct: 55 RGFGYVTFADYKVTRNVLKDKV-ENGAHRIDGKEVEVKRAIPRDDNSATSHEKTKKIFVG 113
Query: 136 GLSSEISDDEIRNFFSEF--GTILEVEMPFDKT-KNQRKGFCFITFESEQVVNDLLKTPK 306
GL + + ++I+ + +V++ K + + +GF F+ +E ++L K
Sbjct: 114 GLPEDATKEDIQEAIESLLEEKVDKVDLIMKKEDETKHRGFAFVELNNEDQADELCCVKK 173
Query: 307 RTIGGKEVDVKRATPK 354
+ GK V+ K+ATP+
Sbjct: 174 IHVKGKMVEAKKATPR 189
>UniRef50_Q8RWN5 Cluster: RNA-binding protein-like; n=3; Arabidopsis
thaliana|Rep: RNA-binding protein-like - Arabidopsis
thaliana (Mouse-ear cress)
Length = 310
Score = 61.7 bits (143), Expect = 5e-09
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Frame = +1
Query: 109 ARHG-KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVN 285
A+ G +IFVGGLS E++D ++ FS FG IL+ ++ ++ + +GF FITF + ++
Sbjct: 3 AKEGSRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRAMD 62
Query: 286 DLLKTPK-RTIGGKEVDVKRATPK 354
+ ++ R G + + V RA PK
Sbjct: 63 ESIREMHGRDFGDRVISVNRAEPK 86
>UniRef50_Q9VFT3 Cluster: CG9654-PA; n=4; Drosophila
melanogaster|Rep: CG9654-PA - Drosophila melanogaster
(Fruit fly)
Length = 428
Score = 61.7 bits (143), Expect = 5e-09
Identities = 28/80 (35%), Positives = 46/80 (57%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KIF+GGLS++ + + +R FFS+FG + + + D N +GF F+T+ + V + +
Sbjct: 33 KIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVEIVQRA 92
Query: 301 PKRTIGGKEVDVKRATPKPD 360
TI K V+ K A P+ D
Sbjct: 93 RPHTIDNKIVETKHALPRQD 112
Score = 60.9 bits (141), Expect = 9e-09
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 24/144 (16%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-------------------- 120
RGF F+ + P+S++ V A HTI+NK V+ K A R
Sbjct: 73 RGFGFVTYVDPKSVEIVQRARPHTIDNKIVETKHALPRQDFKRGGGVGSVVGSFGCEAGF 132
Query: 121 ----KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVND 288
+IF+GGL ++ +R +FS+FG + V++ D+ +++ F F+ F
Sbjct: 133 MNSKRIFLGGLKEYHDENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEK 192
Query: 289 LLKTPKRTIGGKEVDVKRATPKPD 360
L K I V+VKR+T K D
Sbjct: 193 ALAPRKHWILQTLVEVKRSTQKAD 216
>UniRef50_A7RM72 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 153
Score = 61.7 bits (143), Expect = 5e-09
Identities = 31/105 (29%), Positives = 54/105 (51%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFF 180
+GFAF+ + E+++ V+ +H I+N V +K + K+ + + S I + +I F
Sbjct: 50 KGFAFVRLRKKEAVESVLGRDDHVIDNSDVSMEKQDT-YRKVILKNIPSSIGESQILEHF 108
Query: 181 SEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTI 315
S G I V +P + +RKG C +TF S +++K K I
Sbjct: 109 SSSGEIASVYIPENLKTKERKGHCIVTFASVTEAFEVVKKRKHHI 153
Score = 33.5 bits (73), Expect = 1.5
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 303
IFVG L + I +FS G +E + KGF F+ ++ V +L
Sbjct: 11 IFVGSLHPSTVESTIFEYFSTLGEQVEHVKCIRTLSGKSKGFAFVRLRKKEAVESVLGRD 70
Query: 304 KRTIGGKEVDVKR 342
I +V +++
Sbjct: 71 DHVIDNSDVSMEK 83
>UniRef50_Q6IRQ4 Cluster: MGC82187 protein; n=6; Tetrapoda|Rep:
MGC82187 protein - Xenopus laevis (African clawed frog)
Length = 370
Score = 60.5 bits (140), Expect = 1e-08
Identities = 29/83 (34%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +1
Query: 112 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 291
R GK+F+GGL++E ++ + F ++G ++EV + D+ N+ +GF F+TFES D
Sbjct: 6 RPGKLFIGGLNTETNEKALEAVFCKYGRVVEVLLMKDRETNKSRGFAFVTFESPADAKDA 65
Query: 292 LKTPK-RTIGGKEVDVKRATPKP 357
+ + + GK + V++AT KP
Sbjct: 66 ARELNGKALDGKPIKVEQAT-KP 87
>UniRef50_A7QX84 Cluster: Chromosome undetermined scaffold_215,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_215, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 273
Score = 60.5 bits (140), Expect = 1e-08
Identities = 28/78 (35%), Positives = 48/78 (61%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KIFVGGL ++++ R +F F + +V + +D++ + GF F++F+ E VV+ +L
Sbjct: 116 KIFVGGLPPALTEEGFRQYFEAFSNVTDVVVMYDQSIQRPCGFRFVSFDIEDVVDRVLYK 175
Query: 301 PKRTIGGKEVDVKRATPK 354
+ GK+V+VK A PK
Sbjct: 176 TFHDLNGKQVEVKWAFPK 193
Score = 54.8 bits (126), Expect = 6e-07
Identities = 22/59 (37%), Positives = 41/59 (69%)
Frame = +1
Query: 118 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 294
GKIFVGGLS + ++ R +F FG + ++ + +D++ + +GF F++F++E +VN +L
Sbjct: 9 GKIFVGGLSPALIEEGFRQYFEAFGHVTDLVVMYDQSIQRPRGFGFVSFDTEDLVNRVL 67
>UniRef50_A7PVU6 Cluster: Chromosome chr8 scaffold_34, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr8 scaffold_34, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 907
Score = 60.5 bits (140), Expect = 1e-08
Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA-----------KARHGKIFVGGLSS 147
RG+ FI +K ES + A I+ + A K+++GGL+
Sbjct: 106 RGYGFITYKHMESTQSALQAPSKLIDGRMAVCNLACEGLSGASTTPDQAQRKLYIGGLAP 165
Query: 148 EISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKE 327
+++ + + +FF G I E + +DK N+ +GF F+T+++ + + P++ +GG+
Sbjct: 166 DVTSEVLLSFFGRHGEIEEGSVAYDKETNESRGFGFVTYKTVEAAKKAIDDPQKFLGGRS 225
Query: 328 VDVKRA 345
+ VK A
Sbjct: 226 IIVKLA 231
Score = 41.1 bits (92), Expect = 0.007
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = +1
Query: 115 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 294
H K+FV GL+ + + + F G I E + DKT + +G+ FIT++ + L
Sbjct: 64 HRKLFVRGLAWNTTSETLCAAFRLHGEIEEGAVIVDKTTGKSRGYGFITYKHMESTQSAL 123
Query: 295 KTPKRTIGGK 324
+ P + I G+
Sbjct: 124 QAPSKLIDGR 133
>UniRef50_UPI0000E45D7B Cluster: PREDICTED: similar to heterogeneous
nuclear ribonucleoprotein A3, partial; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
heterogeneous nuclear ribonucleoprotein A3, partial -
Strongylocentrotus purpuratus
Length = 614
Score = 60.1 bits (139), Expect = 1e-08
Identities = 31/109 (28%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAA---GEHTINNKKVDPKKA--------KARHGKIFVGGLSS 147
RGF F+ + +DKV+ A H ++ +++D K+A K K FVGGL+
Sbjct: 507 RGFGFVTYATSACVDKVIDAKKDSAHVLDGREIDVKRALPKEEGGSKESTNKAFVGGLAP 566
Query: 148 EISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 294
+ ++++ +F+ +G + +V +P T+ +++ F F+TFE V+ L+
Sbjct: 567 GTTAEDLKAYFTNYGVVTDVSIP-PSTEGKKRVFGFVTFEDSDTVDKLI 614
Score = 53.6 bits (123), Expect = 1e-06
Identities = 26/84 (30%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR-KGFCFITFESEQVVN---D 288
K+F+GGLS + +++ + +F +FG + + + K +++ +GF F+T+ + V+ D
Sbjct: 466 KMFLGGLSFDTTEESVNEYFKKFGELTDCCVVRHKDGDRKPRGFGFVTYATSACVDKVID 525
Query: 289 LLKTPKRTIGGKEVDVKRATPKPD 360
K + G+E+DVKRA PK +
Sbjct: 526 AKKDSAHVLDGREIDVKRALPKEE 549
>UniRef50_Q7XTU5 Cluster: OSJNBb0034I13.9 protein; n=4; Oryza
sativa|Rep: OSJNBb0034I13.9 protein - Oryza sativa
(Rice)
Length = 515
Score = 59.7 bits (138), Expect = 2e-08
Identities = 27/75 (36%), Positives = 44/75 (58%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KIFVG + +++ D + +FS+FG I E + FDKT + KGF ++S + L+
Sbjct: 231 KIFVGNVHADVDVDRLYEYFSQFGEIEEGPLGFDKTTGKPKGFALFVYKSVESARRALEE 290
Query: 301 PKRTIGGKEVDVKRA 345
P R GK ++V++A
Sbjct: 291 PTRNFDGKMLNVQKA 305
Score = 47.6 bits (108), Expect = 8e-05
Identities = 23/68 (33%), Positives = 37/68 (54%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+FV GL D++R+ FS FG + + + DK + KG+ F+ F S + L+
Sbjct: 115 KLFVHGLGWGAGADDLRSAFSRFGELEDCRVISDKQSGRSKGYGFVLFRSRRSALRALRR 174
Query: 301 PKRTIGGK 324
P+ IGG+
Sbjct: 175 PQLQIGGR 182
>UniRef50_Q4U9D6 Cluster: RNA binding protein, putative; n=2;
Theileria|Rep: RNA binding protein, putative - Theileria
annulata
Length = 479
Score = 59.7 bits (138), Expect = 2e-08
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Frame = +1
Query: 37 SIDKVMAAGEHTINNKKVDPKKAKA---RHGKIFVGGLSSEISDDEIRNFFSEFGTILEV 207
SI + + NNKK + KA+ + KI++G L + ++IR FS FG IL +
Sbjct: 124 SISPELCDTKSLTNNKKTEQSKAQEESQKSAKIYIGALDPSCTIEDIRVIFSSFGDILNI 183
Query: 208 EMPFDKTKNQRKGFCFITFESEQ 276
++P D N+ KGFCF+ + ++
Sbjct: 184 DLPTDPETNKVKGFCFVEYRKKE 206
>UniRef50_A5BGN9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 294
Score = 59.3 bits (137), Expect = 3e-08
Identities = 22/75 (29%), Positives = 47/75 (62%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+++GGL+ +++ + + +FF G I E + +DK N+ +GF F+T+++ + +
Sbjct: 109 KLYIGGLAPDVTSEVLLSFFGRHGEIEEGSVAYDKETNESRGFGFVTYKTVEAAKKAIDD 168
Query: 301 PKRTIGGKEVDVKRA 345
P++ +GG+ + VK A
Sbjct: 169 PQKFLGGRSIIVKLA 183
>UniRef50_Q4UI71 Cluster: RNA-binding (SR) protein, putative; n=2;
Theileria|Rep: RNA-binding (SR) protein, putative -
Theileria annulata
Length = 303
Score = 58.8 bits (136), Expect = 3e-08
Identities = 28/78 (35%), Positives = 45/78 (57%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KIF GGL+ + ++++ +FS++G + E+ DK + +GF F+TF VN +L+
Sbjct: 29 KIFAGGLTRSTTPEDLKEYFSKYGEVTHTEIVRDKNTGRSRGFGFVTFADRDSVNTVLRK 88
Query: 301 PKRTIGGKEVDVKRATPK 354
+ I G E DVK A K
Sbjct: 89 VHK-IDGVEADVKLAVRK 105
Score = 49.6 bits (113), Expect = 2e-05
Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 13/131 (9%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG------------KIFVGGLS 144
RGF F+ F +S++ V+ H I+ + D K A + +IFVGG+S
Sbjct: 69 RGFGFVTFADRDSVNTVLRK-VHKIDGVEADVKLAVRKEKSKILAPQYDQTKRIFVGGVS 127
Query: 145 SEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIG-G 321
+I++ R++F+ +G I D+ N+ +G+ F+ +E+ + D K+ + G
Sbjct: 128 EKITESYFRDYFARYGPITSYNYLVDRATNRPRGYGFVIYEN---MEDAEKSIGMHLSLG 184
Query: 322 KEVDVKRATPK 354
+ + K A PK
Sbjct: 185 RNCEAKFAEPK 195
>UniRef50_UPI00015560CE Cluster: PREDICTED: similar to heterogeneous
nuclear ribonucleoprotein A1; n=4; Mammalia|Rep:
PREDICTED: similar to heterogeneous nuclear
ribonucleoprotein A1 - Ornithorhynchus anatinus
Length = 280
Score = 58.4 bits (135), Expect = 5e-08
Identities = 27/94 (28%), Positives = 53/94 (56%)
Frame = +1
Query: 79 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFI 258
+K PK+ + K+F+GGLS E +D+ +R+ F ++GT+ + + D + +GF F+
Sbjct: 2 SKSESPKEPEQLR-KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
Query: 259 TFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 360
T+ + + V+ + + G+ V+ KRA + D
Sbjct: 61 TYATVEEVDAAMNARPHKVDGRVVEPKRAVSRED 94
Score = 50.8 bits (116), Expect = 9e-06
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 11/77 (14%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-----------KIFVGGLSS 147
RGF F+ + E +D M A H ++ + V+PK+A +R KIFVGG+
Sbjct: 55 RGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKE 114
Query: 148 EISDDEIRNFFSEFGTI 198
+ + +R++F ++G I
Sbjct: 115 DTEEHHLRDYFEQYGKI 131
>UniRef50_Q9M9E6 Cluster: F3F9.20; n=8; Arabidopsis thaliana|Rep:
F3F9.20 - Arabidopsis thaliana (Mouse-ear cress)
Length = 302
Score = 58.4 bits (135), Expect = 5e-08
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+FVGGL+ E DE+R +F +FG ILE + DK + KG+ F+TF +
Sbjct: 18 KVFVGGLAWETPTDEMRRYFEQFGEILEAVIITDKNTGKSKGYGFVTFRESDSATRAVAD 77
Query: 301 PKRTIGGKEVDVKRAT---PKP 357
P I G++ + A+ P+P
Sbjct: 78 PNPVIDGRKANCNIASFGRPRP 99
>UniRef50_O23189 Cluster: RNA-binding like protein; n=1; Arabidopsis
thaliana|Rep: RNA-binding like protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 306
Score = 58.4 bits (135), Expect = 5e-08
Identities = 31/77 (40%), Positives = 45/77 (58%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KIFVG L E S D++R++F FG I + +P D ++ +GF F+TF +E V D +
Sbjct: 185 KIFVGRLPQEASVDDLRDYFGRFGHIQDAYIPKDPKRSGHRGFGFVTF-AENGVADRVAR 243
Query: 301 PKRTIGGKEVDVKRATP 351
I G+EV + ATP
Sbjct: 244 RSHEICGQEVAIDSATP 260
Score = 38.7 bits (86), Expect = 0.039
Identities = 15/65 (23%), Positives = 38/65 (58%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+ V G+ +I D ++++ S+FG + + + D++ + +GF ++TF S + + ++
Sbjct: 4 KLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKEEMRQ 63
Query: 301 PKRTI 315
P + +
Sbjct: 64 PAKKV 68
>UniRef50_A5K494 Cluster: Nucleic acid binding factor, putative;
n=2; Plasmodium|Rep: Nucleic acid binding factor,
putative - Plasmodium vivax
Length = 753
Score = 58.4 bits (135), Expect = 5e-08
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL-- 294
K+FV L+S + + +RN+F FG I+++ MP D N+ +G F+TF V +L
Sbjct: 664 KLFVTKLNSVTTIETLRNYFEAFGEIIDIYMPNDVCTNRPRGIAFVTFLDNDCVKKILSN 723
Query: 295 KTPKRTIGGKEVDVKRATPK 354
K K I GKEV V A P+
Sbjct: 724 KNSKHIIDGKEVVVDLADPE 743
Score = 50.8 bits (116), Expect = 9e-06
Identities = 24/76 (31%), Positives = 45/76 (59%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
+IFV L E ++ +FS++G I+++ + + + N+ KGF F++FE + ++ +LK
Sbjct: 364 RIFVTRLPFEAGKKDLEKYFSKYGKIVDIYVSKNLSNNKNKGFGFVSFEKQSSMDKVLKD 423
Query: 301 PKRTIGGKEVDVKRAT 348
I GKE+ V A+
Sbjct: 424 KLHIICGKEIVVDVAS 439
>UniRef50_UPI000049A3A1 Cluster: RNA-binding protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: RNA-binding protein -
Entamoeba histolytica HM-1:IMSS
Length = 112
Score = 57.6 bits (133), Expect = 8e-08
Identities = 18/51 (35%), Positives = 41/51 (80%)
Frame = +1
Query: 115 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 267
+ +I++GG++SE+++ +I FS+FG ++++ MP++ +++ KGFCF+T++
Sbjct: 36 NNEIYIGGIASELNEGDIIIVFSQFGEVIDINMPWNNERDEHKGFCFLTYK 86
>UniRef50_Q6DHU2 Cluster: Zgc:92062; n=4; Clupeocephala|Rep:
Zgc:92062 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 411
Score = 57.6 bits (133), Expect = 8e-08
Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
Frame = +1
Query: 10 AFIVFKAPESIDKVMAAGEHTINNK---KVDPKKAKARHG---KIFVGGLSSEISDDEIR 171
A+IVFK ES + H I +VD ++H IFVG L +IS+ ++
Sbjct: 210 AYIVFKEEESATDALKWNGHEIQAGFYIRVDRVSQHSKHDHKRSIFVGNLPYDISELPLQ 269
Query: 172 NFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATP 351
N F E G I V + D+ KGF ++ FES V LK T+ +++ VKR+
Sbjct: 270 NHFQECGNIEAVRLVRDRDSGMGKGFGYVLFESPDSVMLALKLNGSTLQQRKIRVKRSVK 329
Query: 352 K 354
K
Sbjct: 330 K 330
>UniRef50_A2EQG8 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 332
Score = 57.6 bits (133), Expect = 8e-08
Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 12/127 (9%)
Frame = +1
Query: 10 AFIVFKAPESIDKVMAAGEH------TINNKKVDPKKAKAR------HGKIFVGGLSSEI 153
A++VFK E DK + ++ T+ K PK + + +F+G L +
Sbjct: 123 AYVVFKNVEDRDKAIVGLKNKEVEGFTLRTDKATPKNVSEKISNEESNRTVFIGQLKPTV 182
Query: 154 SDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVD 333
++D +R FS G I V++P D+ + + ++TF E+ V+D LK + K++
Sbjct: 183 TEDMLRKLFSNAGEIDHVKIPRDRETGKSRYVAYVTFVDERSVDDALKFDGTFLEEKQMR 242
Query: 334 VKRATPK 354
V+R+TP+
Sbjct: 243 VERSTPR 249
Score = 31.1 bits (67), Expect = 7.9
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +1
Query: 94 PKKAKARHGK-IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRK 243
P++ + R G+ +F+G + ++ +D+++ EFG I V + + K RK
Sbjct: 53 PEEEEERTGRTLFIGNIPAKFDNDDVKRLCKEFGPIESVRIRNLQFKEDRK 103
>UniRef50_Q0DXG2 Cluster: Os02g0755400 protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Os02g0755400 protein -
Oryza sativa subsp. japonica (Rice)
Length = 176
Score = 57.2 bits (132), Expect = 1e-07
Identities = 25/79 (31%), Positives = 45/79 (56%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+FVGGL+ E +++ F ++G ILE + D+ ++ KG+ F+TF + + ++
Sbjct: 47 KVFVGGLAWETPSKGLQDHFQQYGEILEAVVITDRETSRSKGYGFVTFREPESAREAVRN 106
Query: 301 PKRTIGGKEVDVKRATPKP 357
P TIGG+ + A+ P
Sbjct: 107 PNPTIGGRRANCNIASMGP 125
>UniRef50_A2X9R7 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 355
Score = 57.2 bits (132), Expect = 1e-07
Identities = 25/79 (31%), Positives = 45/79 (56%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+FVGGL+ E +++ F ++G ILE + D+ ++ KG+ F+TF + + ++
Sbjct: 47 KVFVGGLAWETPSKGLQDHFQQYGEILEAVVITDRETSRSKGYGFVTFREPESAREAVRN 106
Query: 301 PKRTIGGKEVDVKRATPKP 357
P TIGG+ + A+ P
Sbjct: 107 PNPTIGGRRANCNIASMGP 125
>UniRef50_Q8IIT2 Cluster: Nucleic acid binding factor, putative;
n=1; Plasmodium falciparum 3D7|Rep: Nucleic acid binding
factor, putative - Plasmodium falciparum (isolate 3D7)
Length = 580
Score = 57.2 bits (132), Expect = 1e-07
Identities = 29/95 (30%), Positives = 53/95 (55%)
Frame = +1
Query: 76 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 255
N + V + + +IF L E S ++ +FS+FG I+++ + + + N+ KGF F
Sbjct: 212 NEQSVYVDEVIKEYPRIFATRLPFEASKKDLEKYFSKFGKIVDIYVSRNISNNKNKGFGF 271
Query: 256 ITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 360
++FE ++ +N +LK I GKE+ V A+ + D
Sbjct: 272 VSFEKQESMNKVLKEKLHIICGKEIVVDVASMRDD 306
Score = 55.2 bits (127), Expect = 4e-07
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL-- 294
K+FV L+S + +++RN+F +FG I+++ MP D N+ +G F+TF + V ++L
Sbjct: 503 KLFVTKLNSATTIEKLRNYFEKFGEIIDIYMPNDVYTNRPRGIAFVTFLDNESVKNILSD 562
Query: 295 KTPKRTIGGKEV 330
+ K I GKEV
Sbjct: 563 EHSKHIIDGKEV 574
>UniRef50_A7PMT7 Cluster: Chromosome chr14 scaffold_21, whole genome
shotgun sequence; n=11; Viridiplantae|Rep: Chromosome
chr14 scaffold_21, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 713
Score = 56.8 bits (131), Expect = 1e-07
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSE-FGTILEVEMPFDKTKNQ--RKGFCFITFESEQVVNDL 291
KIFVGGL S + D + F E FG++ E + D+ +Q +GF F+ F+ E+ +D
Sbjct: 354 KIFVGGLPSSLDTDSLAKIFEEQFGSVEEAIVMGDQMGDQIHSRGFGFVIFKHEKSASDA 413
Query: 292 LKTPKRTIGGKEVDVKRATPK 354
++ TI GK+V++K A PK
Sbjct: 414 VQAHYITIMGKQVEIKSAVPK 434
>UniRef50_Q552K5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 699
Score = 56.4 bits (130), Expect = 2e-07
Identities = 25/72 (34%), Positives = 46/72 (63%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KIFVGG+S + ++ ++ +F +FG +LE ++ D N+ KG+ FITFE+E + + ++T
Sbjct: 104 KIFVGGISWKADENTLKTYFLQFGNVLECKIIMDYNTNKSKGYGFITFENEDSI-EKVRT 162
Query: 301 PKRTIGGKEVDV 336
GK +++
Sbjct: 163 SNLLFMGKNMNI 174
>UniRef50_Q13148 Cluster: TAR DNA-binding protein 43; n=36;
Coelomata|Rep: TAR DNA-binding protein 43 - Homo sapiens
(Human)
Length = 414
Score = 56.4 bits (130), Expect = 2e-07
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG--------KIFVGGLSSEIS 156
+GF F+ F E+ KVM+ H I+ + D K ++ K+FVG + +++
Sbjct: 145 KGFGFVRFTEYETQVKVMSQ-RHMIDGRWCDCKLPNSKQSQDEPLRSRKVFVGRCTEDMT 203
Query: 157 DDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDV 336
+DE+R FFS++G +++V +P + F F+TF +Q+ L I G V +
Sbjct: 204 EDELREFFSQYGDVMDVFIP-----KPFRAFAFVTFADDQIAQSLC-GEDLIIKGISVHI 257
Query: 337 KRATPK 354
A PK
Sbjct: 258 SNAEPK 263
Score = 41.5 bits (93), Expect = 0.006
Identities = 25/97 (25%), Positives = 46/97 (47%)
Frame = +1
Query: 64 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRK 243
+ T + V K+A + + V GL + ++ +++ +FS FG +L V++ D K
Sbjct: 86 DETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSK 145
Query: 244 GFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 354
GF F+ F +E + + + I G+ D K K
Sbjct: 146 GFGFVRF-TEYETQVKVMSQRHMIDGRWCDCKLPNSK 181
>UniRef50_UPI0000F2CBBE Cluster: PREDICTED: similar to musashi
homolog 1 (Drosophila),; n=1; Monodelphis domestica|Rep:
PREDICTED: similar to musashi homolog 1 (Drosophila), -
Monodelphis domestica
Length = 432
Score = 56.0 bits (129), Expect = 2e-07
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 9/75 (12%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK---------KAKARHGKIFVGGLSSEI 153
RGF F+ F +DKV+A H +++K +DPK K R KIFVGGLS
Sbjct: 146 RGFGFVTFVDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNT 205
Query: 154 SDDEIRNFFSEFGTI 198
+ ++++ +F +FG +
Sbjct: 206 TVEDVKQYFEQFGKV 220
Score = 42.3 bits (95), Expect = 0.003
Identities = 19/70 (27%), Positives = 37/70 (52%)
Frame = +1
Query: 145 SEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGK 324
S ++ + +R +F +FG + E + D + +GF F+TF + V+ +L + + K
Sbjct: 114 SPVAHEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFVDQAGVDKVLAQSRHELDSK 173
Query: 325 EVDVKRATPK 354
+D K A P+
Sbjct: 174 TIDPKVAFPR 183
>UniRef50_Q4T824 Cluster: Chromosome undetermined SCAF7912, whole
genome shotgun sequence; n=3; Clupeocephala|Rep:
Chromosome undetermined SCAF7912, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 100
Score = 56.0 bits (129), Expect = 2e-07
Identities = 22/74 (29%), Positives = 46/74 (62%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
++FV + ++ +E++ +F +FG++ + +PFDK +GFC+I F SE +N+ L+
Sbjct: 10 EVFVSKVPWTVAGNELKEYFGQFGSVKKCLLPFDKETGFHRGFCWIGFTSEDGLNNALQK 69
Query: 301 PKRTIGGKEVDVKR 342
+ + G ++ V+R
Sbjct: 70 EQHLLEGSKLQVQR 83
>UniRef50_Q1LVU9 Cluster: Cold inducible RNA binding protein; n=8;
Clupeocephala|Rep: Cold inducible RNA binding protein -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 223
Score = 56.0 bits (129), Expect = 2e-07
Identities = 25/72 (34%), Positives = 46/72 (63%)
Frame = +1
Query: 118 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 297
GK+F+GGLS + ++ + FS++GTI +V++ D+ ++ +GF F+TFE+ + D +
Sbjct: 22 GKLFIGGLSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKDAM- 80
Query: 298 TPKRTIGGKEVD 333
+ GK+VD
Sbjct: 81 ---AAMNGKQVD 89
>UniRef50_Q015S2 Cluster: Single-stranded DNA binding protein, pu;
n=1; Ostreococcus tauri|Rep: Single-stranded DNA binding
protein, pu - Ostreococcus tauri
Length = 435
Score = 56.0 bits (129), Expect = 2e-07
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +1
Query: 109 ARHGKIFVGGLSSEISDDEIRNFFSE-FGTILEVEMPFDKTKNQRKGFCFITFESEQVVN 285
+R +F+GG S E +D +R F + FG + V++ +D+ RKG+ F+ F V
Sbjct: 79 SRERTVFIGGTSHESDEDAVRAHFEKNFGPVESVKLIYDRQTMARKGYGFVKFFDVDVAR 138
Query: 286 DLLKTPKRTIGGKEVDVKRAT 348
+ K I GK VDVK AT
Sbjct: 139 KVKTLEKLVIDGKAVDVKEAT 159
Score = 47.2 bits (107), Expect = 1e-04
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +1
Query: 103 AKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVV 282
A +F GGL E + + + FFS +G +L V++ +D+ KG+ FI F ++ V
Sbjct: 251 APGTESTVFCGGLPIEATPEALGWFFSHYGVVLSVKLIYDRRTGVSKGYGFIVF-ADVAV 309
Query: 283 NDLLKTPKR-TIGGKEVDVKRA 345
+++K ++ GK +DV A
Sbjct: 310 AEMVKAQRQMPFMGKMIDVSEA 331
>UniRef50_UPI0000E45F82 Cluster: PREDICTED: hypothetical protein;
n=6; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 890
Score = 55.6 bits (128), Expect = 3e-07
Identities = 31/103 (30%), Positives = 52/103 (50%)
Frame = +1
Query: 28 APESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEV 207
A ES++ + +N KK P++ +FV L +++ IR FSE GT+ +V
Sbjct: 588 AKESLNDQSVEFQMAMNPKKKKPERDNNDPRTVFVKNLGYNVTEKRIRKVFSECGTVRDV 647
Query: 208 EMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDV 336
M + K + KG+C++ FE E+ LK + TI + + V
Sbjct: 648 RMVTNYQK-KFKGYCYVEFEDEESAKKALKKDRETINDRPMYV 689
Score = 42.3 bits (95), Expect = 0.003
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 16/107 (14%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKK--VDPKKA--------------KARHGKIFV 132
+G+ ++ F+ ES K + TIN++ VDP K K K+FV
Sbjct: 658 KGYCYVEFEDEESAKKALKKDRETINDRPMYVDPSKDRSGAPAEKKFLYENKMEKNKLFV 717
Query: 133 GGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 273
GL ++ +E+ FS+FG + V + K+ KG ++ FE+E
Sbjct: 718 SGLPRTLTTEELEKTFSKFGKLKGVRIVTFKS-GVPKGLAYVDFENE 763
>UniRef50_Q9FX45 Cluster: RNA-binding glycine-rich protein,
putative; n=1; Arabidopsis thaliana|Rep: RNA-binding
glycine-rich protein, putative - Arabidopsis thaliana
(Mouse-ear cress)
Length = 181
Score = 55.6 bits (128), Expect = 3e-07
Identities = 29/120 (24%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Frame = +1
Query: 4 GFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFS 183
G I + I V+ + + ++ P + K++V GLS ++D +R+ F
Sbjct: 39 GTGVISARRRRDIGGVLISSCLSTDSSSSPPSSSSGPKTKLYVSGLSFRTTEDTLRDTFE 98
Query: 184 EFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEVDVKRATPKPD 360
+FG ++ + M DK N+ KGF F+ +E+ E+ + + + + G+ + V+ A + D
Sbjct: 99 QFGNLIHMNMVMDKVANRPKGFAFLRYETEEEAMKAIQGMHGKFLDGRVIFVEEAKTRSD 158
>UniRef50_O75526 Cluster: RNA-binding motif protein,
X-linked-like-2; n=77; Euteleostomi|Rep: RNA-binding
motif protein, X-linked-like-2 - Homo sapiens (Human)
Length = 392
Score = 55.6 bits (128), Expect = 3e-07
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +1
Query: 112 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 291
R GK+F+GGL+ E + + F ++G I+EV + D+ N+ +GF F+TFES
Sbjct: 6 RPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAA 65
Query: 292 LKTPK-RTIGGKEVDVKRATPKP 357
+ +++ GK + V +AT KP
Sbjct: 66 ARDMNGKSLDGKAIKVAQAT-KP 87
>UniRef50_Q8LPB0 Cluster: Glycine-rich RNA-binding protein; n=1;
Physcomitrella patens|Rep: Glycine-rich RNA-binding
protein - Physcomitrella patens (Moss)
Length = 155
Score = 55.2 bits (127), Expect = 4e-07
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+FVGGL+ +DD I+ FS FG + EV++ D+ + +GF F+TF ++Q L+
Sbjct: 43 KLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAALQA 102
Query: 301 -PKRTIGGKEVDVKRAT 348
R + G+ + V AT
Sbjct: 103 LDGRDLAGRTIRVNYAT 119
>UniRef50_A7PA84 Cluster: Chromosome chr14 scaffold_9, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_9, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 597
Score = 55.2 bits (127), Expect = 4e-07
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
++FVGGLS I++ IR FS G I+EV M D+ + KG+CF+ F +++ N +K
Sbjct: 68 EVFVGGLSRTITESNIREVFSTCGEIIEVRMMTDQ-NGKSKGYCFVRFTTKEAANKAIKE 126
Query: 301 PKR-TIGGKEVDVKRAT 348
+ GK++ V +T
Sbjct: 127 KSGFMVEGKKIGVVPST 143
>UniRef50_Q4PFD1 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 464
Score = 55.2 bits (127), Expect = 4e-07
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +1
Query: 115 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 294
H +FVG LS ++ D +++FFS F ++ +V + +D + +GF FI F S+Q +D +
Sbjct: 130 HSHLFVGDLSPDVDDALLQSFFSRFTSLADVRVMYDAATGKSRGFGFINFRSKQDADDCI 189
Query: 295 KTPK-RTIGGKEVDVKRATPK 354
T + + + G+++ V A K
Sbjct: 190 ATCQGQWLRGRQIRVNWANQK 210
>UniRef50_Q4P2L3 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 508
Score = 55.2 bits (127), Expect = 4e-07
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 9/103 (8%)
Frame = +1
Query: 73 INNKKVDPKKAKARH--------GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKT 228
IN VDP A+H K+F G L+ ++DE++ FSE GT+ ++ T
Sbjct: 202 INQSIVDPVANNAQHVNKVEEDDKKVFAGNLAFATTEDELKTLFSEAGTVTHAQVITRGT 261
Query: 229 KNQRKGFCFITFESEQVVNDLLK-TPKRTIGGKEVDVKRATPK 354
++ G+ F+TF +E + +K KR +GG+E+ V+ A P+
Sbjct: 262 RS--LGYGFVTFSTEAGAQNAIKLLNKREVGGREISVESAKPQ 302
>UniRef50_UPI00005A196B Cluster: PREDICTED: similar to Heterogeneous
nuclear ribonucleoprotein A1 (Helix-destabilizing
protein) (Single-strand binding protein) (hnRNP core
protein A1) (HDP); n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to Heterogeneous nuclear
ribonucleoprotein A1 (Helix-destabilizing protein)
(Single-strand binding protein) (hnRNP core protein A1)
(HDP) - Canis familiaris
Length = 286
Score = 54.8 bits (126), Expect = 6e-07
Identities = 22/80 (27%), Positives = 43/80 (53%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KIFVGG+ + + +R +F ++G I +E+ D+ +++GF F+TF + ++
Sbjct: 60 KIFVGGIEEDTEEHHLRGYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFNDHDSADKIVIQ 119
Query: 301 PKRTIGGKEVDVKRATPKPD 360
T+ G +V +A K +
Sbjct: 120 KYHTVNGHNCEVGKALLKQE 139
Score = 33.5 bits (73), Expect = 1.5
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 105
RGFAF+ F +S DK++ HT+N + KA
Sbjct: 100 RGFAFVTFNDHDSADKIVIQKYHTVNGHNCEVGKA 134
>UniRef50_Q6ZZX5 Cluster: Heterogeneous nuclear ribonucleoprotein;
n=2; Euteleostomi|Rep: Heterogeneous nuclear
ribonucleoprotein - Salmo salar (Atlantic salmon)
Length = 120
Score = 54.8 bits (126), Expect = 6e-07
Identities = 26/97 (26%), Positives = 48/97 (49%)
Frame = +1
Query: 31 PESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVE 210
P +D + + + +A A+ KIF+GGL +I D+ + ++FS+FG I + E
Sbjct: 6 PHVVDGTNVELKRAVAREDAGKPEALAKVKKIFIGGLKDDIEDEHLNDYFSQFGEIEKAE 65
Query: 211 MPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGG 321
+ +K +++GF F+ F + + TI G
Sbjct: 66 VIAEKETGKKRGFGFVHFTDNDSADKAVVVKFHTING 102
>UniRef50_Q4S8N9 Cluster: Chromosome 7 SCAF14703, whole genome
shotgun sequence; n=4; Clupeocephala|Rep: Chromosome 7
SCAF14703, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 157
Score = 54.8 bits (126), Expect = 6e-07
Identities = 26/69 (37%), Positives = 40/69 (57%)
Frame = +1
Query: 118 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 297
GK+F+GGLS + S D +R++FS+FG I E + D T + +GF F+TF V+ +L
Sbjct: 21 GKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKVLA 80
Query: 298 TPKRTIGGK 324
+ K
Sbjct: 81 QQHHELDSK 89
Score = 31.5 bits (68), Expect = 6.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNK 84
RGF F+ F S+DKV+A H +++K
Sbjct: 62 RGFGFVTFTDAASVDKVLAQQHHELDSK 89
>UniRef50_A0KJ75 Cluster: RNA-binding protein; n=5; Bacteria|Rep:
RNA-binding protein - Aeromonas hydrophila subsp.
hydrophila (strain ATCC 7966 / NCIB 9240)
Length = 95
Score = 54.8 bits (126), Expect = 6e-07
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF----ESEQVVND 288
KI+VG LS ++ DE+ FS+FG + +V++ D+ Q KGF FI E+E+ +
Sbjct: 5 KIYVGNLSYRMTADELTTVFSQFGQVDKVDIIIDRDTGQSKGFGFIEMPVNGEAEKAIAG 64
Query: 289 LLKTPKRTIGGKEVDVKRATPKPD 360
L T IGG+ + V +A PK D
Sbjct: 65 LHGT---EIGGRTITVNQAKPKTD 85
>UniRef50_Q7XI13 Cluster: Glycine-rich RNA-binding protein-like;
n=9; Magnoliophyta|Rep: Glycine-rich RNA-binding
protein-like - Oryza sativa subsp. japonica (Rice)
Length = 308
Score = 54.8 bits (126), Expect = 6e-07
Identities = 24/85 (28%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +1
Query: 103 AKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVV 282
A+ G+IFVGGLS + ++ + FSE+G ++E ++ ++ + +GF F+TF + V
Sbjct: 2 AEKEVGRIFVGGLSWDTTERTLERAFSEYGKVIETQVVLERDTGRSRGFGFVTFSEPRAV 61
Query: 283 NDLLK-TPKRTIGGKEVDVKRATPK 354
+ ++ + G+ + V +A P+
Sbjct: 62 DAAIRGMHNGELDGRTISVNKAQPR 86
>UniRef50_Q4MZK1 Cluster: Nucleic acid binding factor, putative;
n=2; Theileria|Rep: Nucleic acid binding factor,
putative - Theileria parva
Length = 421
Score = 54.8 bits (126), Expect = 6e-07
Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL-K 297
K+FVG ++ E S +R +FS+FG +++V +P D + KGF FITF ++ ++ L
Sbjct: 339 KLFVGRIAFETSVHSLRTYFSQFGEVIDVYIPKDPHTQKGKGFGFITFANKNSIHSALDP 398
Query: 298 TPKRTIGGKEVDVKRA 345
+ K + G+E+ V A
Sbjct: 399 SLKHVVDGREIIVDYA 414
Score = 53.6 bits (123), Expect = 1e-06
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Frame = +1
Query: 76 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKT-KNQRKGFC 252
+ +D +K A +IF+ ++ E + D++ ++F +FGT+ + P KGF
Sbjct: 106 HKSSLDDEKINAN--RIFITRIAFEATKDDLEDYFKKFGTVYDAYCPRQNNYSGLNKGFG 163
Query: 253 FITFESEQVVNDLLKTPKRTIGGKEVDVKRAT 348
FI+FE+E + + ++ I G+EV V RAT
Sbjct: 164 FISFENEDSIRKVFESGPHVIMGREVIVDRAT 195
>UniRef50_A7RFA9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 134
Score = 54.8 bits (126), Expect = 6e-07
Identities = 29/92 (31%), Positives = 48/92 (52%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFF 180
R + F++FK + K + H IN K VD K++ I+VGGL S ++ +R F
Sbjct: 41 RNYGFVLFK-DDGPSKEVLKKSHVINGKTVDVGKSR-NFRVIYVGGLPSHFTEQTVREHF 98
Query: 181 SEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 276
+FG I V+ + + + G+ F+TF S +
Sbjct: 99 KKFGVIEAVKFIENTSVGAKTGYAFVTFSSTE 130
Score = 39.1 bits (87), Expect = 0.030
Identities = 20/74 (27%), Positives = 40/74 (54%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 303
+FVGGL+S ++ ++++F +FG + V + + + F+ F+ + ++LK
Sbjct: 3 VFVGGLASGTDEEGLKDYFEQFGEVESVRI-MRTFLGYSRNYGFVLFKDDGPSKEVLK-K 60
Query: 304 KRTIGGKEVDVKRA 345
I GK VDV ++
Sbjct: 61 SHVINGKTVDVGKS 74
>UniRef50_Q14011 Cluster: Cold-inducible RNA-binding protein; n=62;
Eukaryota|Rep: Cold-inducible RNA-binding protein - Homo
sapiens (Human)
Length = 172
Score = 54.8 bits (126), Expect = 6e-07
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +1
Query: 118 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVND-LL 294
GK+FVGGLS + ++ + FS++G I EV + D+ + +GF F+TFE+ D ++
Sbjct: 6 GKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMM 65
Query: 295 KTPKRTIGGKEVDVKRATPKPD 360
+++ G+++ V +A D
Sbjct: 66 AMNGKSVDGRQIRVDQAGKSSD 87
>UniRef50_Q7NHK5 Cluster: RNA-binding protein; n=10; cellular
organisms|Rep: RNA-binding protein - Gloeobacter
violaceus
Length = 123
Score = 54.4 bits (125), Expect = 7e-07
Identities = 22/79 (27%), Positives = 43/79 (54%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 303
+FVG L +++ +I FSE+GT+ V++P D+ + +GF F+ E+ +
Sbjct: 3 VFVGNLPFSVTEQDITEAFSEYGTVKSVKIPTDRETGRPRGFAFVEMADEEEAKVIESLD 62
Query: 304 KRTIGGKEVDVKRATPKPD 360
T +++ V +A P+P+
Sbjct: 63 GATWDNRQIRVNKAEPRPE 81
>UniRef50_Q8I2Y5 Cluster: RNA-binding protein, putative; n=4;
Plasmodium|Rep: RNA-binding protein, putative -
Plasmodium falciparum (isolate 3D7)
Length = 388
Score = 54.4 bits (125), Expect = 7e-07
Identities = 32/115 (27%), Positives = 62/115 (53%), Gaps = 5/115 (4%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAK---ARH--GKIFVGGLSSEISDDE 165
+G+ F+ FK ES+ K + + HT++NK++ + H K+FV LS + +
Sbjct: 181 KGYGFVTFKYVESVQKCLKSS-HTLDNKELQVRLVADPFTDHYQNKLFVRNLSQKTNVST 239
Query: 166 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEV 330
+R+ F ++G + E + D + + KG+ F+TF S + +++ P+R I + V
Sbjct: 240 LRSIFEKYGKLEECVIIHDN-EGKSKGYGFLTFSSPREAFKVMQQPERIIDNRVV 293
Score = 33.5 bits (73), Expect = 1.5
Identities = 19/73 (26%), Positives = 38/73 (52%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
++ V + D++ +F FG I + + +K + + KG+ F+TF+ + V LK+
Sbjct: 142 RLMVRNIPFSTRDEQFLKYFESFGEIEDGIIVREK-EGRSKGYGFVTFKYVESVQKCLKS 200
Query: 301 PKRTIGGKEVDVK 339
T+ KE+ V+
Sbjct: 201 -SHTLDNKELQVR 212
>UniRef50_Q7RIJ3 Cluster: RNA recognition motif, putative; n=3;
Plasmodium (Vinckeia)|Rep: RNA recognition motif,
putative - Plasmodium yoelii yoelii
Length = 498
Score = 54.4 bits (125), Expect = 7e-07
Identities = 27/92 (29%), Positives = 54/92 (58%)
Frame = +1
Query: 73 INNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFC 252
I NK + ++A + +IFV L E++ ++ +FS++G I+++ + + + N+ KGF
Sbjct: 199 IENKAILVEEALKDYPRIFVTRLPFEVNKKDLEKYFSKYGKIIDIYVSKNLSNNKNKGFG 258
Query: 253 FITFESEQVVNDLLKTPKRTIGGKEVDVKRAT 348
F++FE++ ++ L I GKE+ V A+
Sbjct: 259 FVSFENQISMDKALSEKLHIICGKEIVVDIAS 290
>UniRef50_A0BHN3 Cluster: Chromosome undetermined scaffold_108,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_108,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 232
Score = 54.4 bits (125), Expect = 7e-07
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 11/129 (8%)
Frame = +1
Query: 4 GFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK-----------IFVGGLSSE 150
G+ I F E+I K +A + + +D K+AK + IFV LS +
Sbjct: 44 GYGHITFSDSEAIQKALALNGTQLGGRYIDVKEAKGTQPQKPNVPPPDCLTIFVKNLSYD 103
Query: 151 ISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEV 330
++ D+I + F G + V M ++ KGF +I FE Q V L+ + + G++V
Sbjct: 104 LNADQIGDSFRPCGKVANVRMVYNTVSKNFKGFAYIDFEDHQSVIKALQMNGKKVHGRQV 163
Query: 331 DVKRATPKP 357
V +P
Sbjct: 164 QVDFDVKRP 172
Score = 50.8 bits (116), Expect = 9e-06
Identities = 21/75 (28%), Positives = 42/75 (56%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
++F+ GL S++++++ F + G IL +++P + N+ G+ ITF + + L
Sbjct: 3 QVFISGLPYTASENDVQSLFEDCGEILSIKLPRYQDSNRLLGYGHITFSDSEAIQKALAL 62
Query: 301 PKRTIGGKEVDVKRA 345
+GG+ +DVK A
Sbjct: 63 NGTQLGGRYIDVKEA 77
>UniRef50_Q0U9M6 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 830
Score = 54.4 bits (125), Expect = 7e-07
Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Frame = +1
Query: 34 ESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEM 213
E++++ +HT + +K + G++++ L E+++DE+R F+++G++ EV +
Sbjct: 282 EAVEEQAPEADHTKVPSSDEVEKIRET-GRLYLRNLHFEVTEDELRQHFAKYGSLEEVHV 340
Query: 214 PFDKTKNQRKGFCFITF-ESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 360
P K+ + KGF FI F E EQ V T G+ + + A K D
Sbjct: 341 PLKKSDGKGKGFAFIQFKEPEQAVVAYDDTDGTIFQGRLLHIISAKAKKD 390
>UniRef50_Q01085 Cluster: Nucleolysin TIAR; n=67; Euteleostomi|Rep:
Nucleolysin TIAR - Homo sapiens (Human)
Length = 375
Score = 54.4 bits (125), Expect = 7e-07
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Frame = +1
Query: 97 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE- 273
KK + H +FVG LS EI+ ++I++ F+ FG I + + D + KG+ F++F ++
Sbjct: 90 KKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKL 149
Query: 274 QVVNDLLKTPKRTIGGKEVDVKRATPKP 357
N ++ + +GG+++ AT KP
Sbjct: 150 DAENAIVHMGGQWLGGRQIRTNWATRKP 177
Score = 37.1 bits (82), Expect = 0.12
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLKT 300
++VG LS ++++ I FS+ G +M + T N +CF+ F E L
Sbjct: 11 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSND--PYCFVEFYEHRDAAAALAAM 68
Query: 301 PKRTIGGKEVDVKRAT 348
R I GKEV V AT
Sbjct: 69 NGRKILGKEVKVNWAT 84
>UniRef50_Q5K249 Cluster: Putative glycine-rich RNA-binding protein;
n=1; Guillardia theta|Rep: Putative glycine-rich
RNA-binding protein - Guillardia theta (Cryptomonas phi)
Length = 152
Score = 54.0 bits (124), Expect = 1e-06
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLK 297
K FV GL ++ +++R+ F+EFG I + + +D+ + +GF F+TF ES +
Sbjct: 62 KCFVSGLPWALTSEDLRDLFAEFGAIQDANVVYDRETGRSRGFGFVTFAESADCEAAITA 121
Query: 298 TPKRTIGGKEVDVKRA 345
K IGG+ V VK+A
Sbjct: 122 MDKANIGGRTVLVKQA 137
>UniRef50_Q4H2Q6 Cluster: Ci-Tardbp protein; n=1; Ciona
intestinalis|Rep: Ci-Tardbp protein - Ciona intestinalis
(Transparent sea squirt)
Length = 440
Score = 54.0 bits (124), Expect = 1e-06
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH------GKIFVGGLSSEISDD 162
RG+ FI F + E + +++ + H I + D K ++ KIFVG ++ +++ D
Sbjct: 179 RGYGFIRFSSYE-VQELVLSQRHIIGERWCDVKIPHSKDQKPTVSSKIFVGRITEKMTKD 237
Query: 163 EIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKR 342
EIR +F +FG + +V +P + F F+TF V +L+ + I G V +
Sbjct: 238 EIRQYFEQFGDVDDVYIPI-----PFRAFAFVTFRDSNVAANLI-GEDQVINGVSVYINT 291
Query: 343 ATPK 354
A PK
Sbjct: 292 ADPK 295
>UniRef50_A7SUY1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 235
Score = 54.0 bits (124), Expect = 1e-06
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +1
Query: 115 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVNDL 291
H IFVG L+ + + +R F FG I EV + D KN+ KGF F++F E +
Sbjct: 86 HFHIFVGDLAENVDNALLRKTFEPFGEISEVRVVKDPAKNKSKGFGFVSFVRREDAAKAI 145
Query: 292 LKTPKRTIGGKEVDVKRATPK 354
+ TIGGK+V A K
Sbjct: 146 AEMDSVTIGGKQVKTNWAARK 166
Score = 34.7 bits (76), Expect = 0.64
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 225
++VG L ++ D E++ FS++G+ILE ++ DK
Sbjct: 196 VYVGNLPPDVKDYELQQMFSQYGSILETKVFADK 229
>UniRef50_Q01L95 Cluster: OSIGBa0137L20.5 protein; n=7; Oryza
sativa|Rep: OSIGBa0137L20.5 protein - Oryza sativa
(Rice)
Length = 137
Score = 53.6 bits (123), Expect = 1e-06
Identities = 22/55 (40%), Positives = 35/55 (63%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVN 285
++F+GGLS ++D + FS++G +LE + DK N+ KGF F+ F SE+ N
Sbjct: 38 RLFIGGLSQFATEDSLAEAFSQYGQVLEATIVTDKMTNRPKGFGFVKFASEEAAN 92
>UniRef50_Q5KP68 Cluster: Putative uncharacterized protein; n=3;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 814
Score = 53.6 bits (123), Expect = 1e-06
Identities = 29/104 (27%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Frame = +1
Query: 43 DKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGT-ILEVEMPF 219
D + GE +K + AK + +++ GL + +++E++ E G ++V++ F
Sbjct: 655 DDISDEGEKKDEDKTEFTEDAKPKRYSLYIKGLPTPTTEEELKAVVGESGQKAIQVKIIF 714
Query: 220 DKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATP 351
D+ Q+K F ++ F+SE+V+N+ LK TI V+V + P
Sbjct: 715 DQFTKQQKDFGYLDFDSEEVMNEALKASTGTIRDTPVNVSISKP 758
>UniRef50_Q8N9W6 Cluster: Protein boule-like; n=35; Eumetazoa|Rep:
Protein boule-like - Homo sapiens (Human)
Length = 283
Score = 53.6 bits (123), Expect = 1e-06
Identities = 23/79 (29%), Positives = 48/79 (60%)
Frame = +1
Query: 73 INNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFC 252
+NN P+ +IFVGG+ + ++ ++R FFS++G++ EV++ D+ KG+
Sbjct: 18 LNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRA-GVSKGYG 76
Query: 253 FITFESEQVVNDLLKTPKR 309
F+TFE+++ +L+ ++
Sbjct: 77 FVTFETQEDAQKILQEAEK 95
>UniRef50_Q1LV83 Cluster: Novel protein; n=4; Danio rerio|Rep: Novel
protein - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 865
Score = 53.2 bits (122), Expect = 2e-06
Identities = 25/70 (35%), Positives = 42/70 (60%)
Frame = +1
Query: 58 AGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQ 237
+GE T N +++ K +G + + LS + DDE++ FS+FGT+LE +P K +
Sbjct: 105 SGE-TKNTEEIPSPTKKKENGWLIIRNLSFKCEDDELKQIFSKFGTVLETRIPL-KPDGK 162
Query: 238 RKGFCFITFE 267
+KGF F+ F+
Sbjct: 163 KKGFAFVQFK 172
Score = 50.8 bits (116), Expect = 9e-06
Identities = 25/79 (31%), Positives = 45/79 (56%)
Frame = +1
Query: 31 PESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVE 210
PE ++ A E T K +K K + ++ + LS + +D+++ FSEFGT+LE +
Sbjct: 208 PEDTEEPHKAEETTSTEKFKGIRKIKLK-SRLIIRNLSFKCEEDDLKQIFSEFGTVLEAK 266
Query: 211 MPFDKTKNQRKGFCFITFE 267
+P K +++GF F+ F+
Sbjct: 267 IPL-KPDGKKRGFAFVLFK 284
Score = 32.7 bits (71), Expect = 2.6
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 303
+FV L S++ + FSE G + + DK K R GF ++TF E LK
Sbjct: 6 LFVRRLPETASNEHLAEIFSEIGPLKNCFVVCDKEKKCR-GFGYVTFSMEDDAQRALKEV 64
Query: 304 K 306
K
Sbjct: 65 K 65
Score = 31.5 bits (68), Expect = 6.0
Identities = 20/94 (21%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Frame = +1
Query: 70 TINNKKVDPKKAKARHGK-IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKG 246
T + KK +P + G+ IF+ LS + ++ + +FG + V + + KG
Sbjct: 422 TPSKKKRNPLPSDVNEGRTIFIRNLSFDSEEEGLEEVLLQFGELSYVRVVMNPDTGVSKG 481
Query: 247 FCFITFESEQVVNDLLKT--PKRTIGGKEVDVKR 342
F F+S++ + ++ G ++D +R
Sbjct: 482 CAFAQFKSKEAAEKCIAAALDEKEFSGIKLDGRR 515
>UniRef50_Q5ZAN1 Cluster: Putative uncharacterized protein
OSJNBb0053G03.9; n=5; Oryza sativa|Rep: Putative
uncharacterized protein OSJNBb0053G03.9 - Oryza sativa
subsp. japonica (Rice)
Length = 407
Score = 53.2 bits (122), Expect = 2e-06
Identities = 27/78 (34%), Positives = 42/78 (53%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KIFVGGL ++ +++ +F++FG + + D +GF FI F SE+ LK
Sbjct: 220 KIFVGGLPVSATEKKLKEYFNKFGEVNRAIVVIDLNTKMPRGFGFIQFASEESTARALKK 279
Query: 301 PKRTIGGKEVDVKRATPK 354
K + G+ V+V A PK
Sbjct: 280 DKHFLCGQWVEVSLAMPK 297
Score = 50.4 bits (115), Expect = 1e-05
Identities = 22/50 (44%), Positives = 30/50 (60%)
Frame = +1
Query: 115 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 264
HGK+FVGG+ S+ E+R FS FGT+ V P +K +GF F+ F
Sbjct: 28 HGKVFVGGVPLGTSESELRAHFSRFGTVAFVGAPKNKQTGAARGFAFVQF 77
>UniRef50_A7PL41 Cluster: Chromosome chr7 scaffold_20, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_20, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 458
Score = 53.2 bits (122), Expect = 2e-06
Identities = 29/127 (22%), Positives = 62/127 (48%), Gaps = 11/127 (8%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVD----------PKKAKARHG-KIFVGGLSS 147
+G+ F++FK + K + INN+ P +++ G KI+V + +
Sbjct: 133 KGYGFVLFKTRQGAVKALKQPGKKINNRMTQSQLASMGPSPPPQSQDTVGRKIYVSNVQA 192
Query: 148 EISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKE 327
++ + +R+FF++FG I + FD + +GF +++++ L+ P R G +
Sbjct: 193 DVDPERLRSFFAKFGEIETGPIGFDTQTGKSRGFALFVYKNQESARKALEDPYRIFEGHQ 252
Query: 328 VDVKRAT 348
+ ++AT
Sbjct: 253 LHCQKAT 259
>UniRef50_A7S6X1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 172
Score = 53.2 bits (122), Expect = 2e-06
Identities = 25/78 (32%), Positives = 43/78 (55%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
++FVGGL+ ++ E+ FFS FG + +V + D+ KGF FITF E+ L++
Sbjct: 18 RVFVGGLARGTTELELETFFSNFGPVADVRIVCDRRTGLNKGFGFITFSLEEPAKKLIEQ 77
Query: 301 PKRTIGGKEVDVKRATPK 354
G+ + +++A K
Sbjct: 78 NNIDFKGRSLRLRQAIRK 95
>UniRef50_P21187 Cluster: Polyadenylate-binding protein
(Poly(A)-binding protein); n=6; Bilateria|Rep:
Polyadenylate-binding protein (Poly(A)-binding protein)
- Drosophila melanogaster (Fruit fly)
Length = 634
Score = 53.2 bits (122), Expect = 2e-06
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 9/128 (7%)
Frame = +1
Query: 4 GFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISD 159
G+A++ F+ P ++ + + NK + DP ++ G +F+ L I +
Sbjct: 44 GYAYVNFQQPADAERALDTMNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDN 103
Query: 160 DEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL-KTPKRTIGGKEVDV 336
I + FS FG IL ++ D+ K KG+ F+ FE+E+ N + K + GK+V V
Sbjct: 104 KAIYDTFSAFGNILSCKVATDE-KGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYV 162
Query: 337 KRATPKPD 360
+ P+ +
Sbjct: 163 GKFIPRKE 170
>UniRef50_UPI00006CFFFC Cluster: RNA binding protein; n=1;
Tetrahymena thermophila SB210|Rep: RNA binding protein -
Tetrahymena thermophila SB210
Length = 451
Score = 52.8 bits (121), Expect = 2e-06
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 4/118 (3%)
Frame = +1
Query: 10 AFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR----HGKIFVGGLSSEISDDEIRNF 177
A+I+F E +K + A K + KA + IFVG L +IS++++R+
Sbjct: 143 AYILFSTQEEAEKSLEANGKVFLEKHLRVDKANEKILDYTRTIFVGNLHFKISEEQLRHH 202
Query: 178 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATP 351
F G IL V + D ++ KGF ++ F+ + + L+ + +E+ VK+A P
Sbjct: 203 FESCGDILNVRVIRDPKTHEGKGFGYVFFKEKTGFQNALEKNGTKLLEREIRVKKAVP 260
>UniRef50_Q569S7 Cluster: LOC443584 protein; n=5; Xenopus|Rep:
LOC443584 protein - Xenopus laevis (African clawed frog)
Length = 414
Score = 52.8 bits (121), Expect = 2e-06
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Frame = +1
Query: 10 AFIVFKAPESIDKVMAAGEHTINNK---KVDPKKAKARHGK---IFVGGLSSEISDDEIR 171
A++VFK S K + + + +VD + H FVG L +I ++ IR
Sbjct: 231 AYVVFKDESSASKALMRNGAEVGSGFHIRVDMASKSSSHDNKRSAFVGNLPYDIEEESIR 290
Query: 172 NFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 345
FS+ G + V + D+ KGF ++ FES V LK + G+ + VKR+
Sbjct: 291 KHFSQCGDVQGVRIIRDQKTGIGKGFGYVLFESADAVQLALKLNNSQLSGRRIRVKRS 348
>UniRef50_Q94BU4 Cluster: At1g33470/F10C21_14; n=2; Arabidopsis
thaliana|Rep: At1g33470/F10C21_14 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 244
Score = 52.8 bits (121), Expect = 2e-06
Identities = 25/75 (33%), Positives = 39/75 (52%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+FVGGL+ E +RN+F +FG I+E + DK+ + KG+ F+TF +
Sbjct: 8 KVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQKACVD 67
Query: 301 PKRTIGGKEVDVKRA 345
P I G+ + A
Sbjct: 68 PAPVIDGRRANCNLA 82
>UniRef50_A7QJF1 Cluster: Chromosome chr8 scaffold_106, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr8 scaffold_106, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 332
Score = 52.8 bits (121), Expect = 2e-06
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
+IFVGGL S+ + + FS +G ILE + ++ + +GF FITF + + D ++
Sbjct: 8 RIFVGGLGWNTSERHLEDAFSRYGKILESLVMMERDTGRPRGFGFITFADHRAMEDAIRE 67
Query: 301 PK-RTIGGKEVDVKRATPK 354
R + G+ + V +A PK
Sbjct: 68 MHGRELDGRVISVNKAQPK 86
>UniRef50_A7PZY6 Cluster: Chromosome chr8 scaffold_41, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr8 scaffold_41, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 632
Score = 52.8 bits (121), Expect = 2e-06
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +1
Query: 97 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE-SE 273
++ K R +IF+GGL +++IR F E G +LEV + + + KG+ F+ F +
Sbjct: 324 ERQKRRKTEIFIGGLDKSAREEDIRKVFEEVGEVLEVRLMMNSKTGKNKGYAFLRFALAS 383
Query: 274 QVVNDLLKTPKRTIGGKE 327
L K PK I GK+
Sbjct: 384 DAKRALAKYPKIEICGKQ 401
>UniRef50_A7PG82 Cluster: Chromosome chr6 scaffold_15, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr6 scaffold_15, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 516
Score = 52.8 bits (121), Expect = 2e-06
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 18/138 (13%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKK----------------VDPKKAKARHGKIFV 132
+G+AFI+FK K + + I N+ V P ++ KIFV
Sbjct: 236 KGYAFILFKHRSGARKALKQPQKKIGNRMTSCQLASAGPVPAPPPVVPPVSEYTQRKIFV 295
Query: 133 GGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRT 312
+SSEI ++ FF++FG I E + DK+ + KGF ++S + L+ P +
Sbjct: 296 SNVSSEIDPQKLLEFFAKFGEIEEGPLGLDKSTGKPKGFALFVYKSIESSRRALEEPHKI 355
Query: 313 IGGKEVDVKRAT--PKPD 360
G + ++A PKP+
Sbjct: 356 FEGHTLHCQKAIDGPKPN 373
>UniRef50_A5BSV4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 195
Score = 52.8 bits (121), Expect = 2e-06
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+FVGGL+ E D +R F +FG ILE + DK + KG+ F+TF +
Sbjct: 17 KVFVGGLAWETPTDVMRRHFEQFGEILEAVIITDKNTGKSKGYGFVTFRDPESARRACVD 76
Query: 301 PKRTIGGKEVDVKRAT---PKP 357
P I G+ + A+ P+P
Sbjct: 77 PNPVIDGRRANCNIASLGRPRP 98
>UniRef50_UPI0000E806AC Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 104
Score = 52.4 bits (120), Expect = 3e-06
Identities = 21/72 (29%), Positives = 42/72 (58%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 303
IFV + +S E++ +FS+FG++ ++PFDK K +C+I F S + V ++L+
Sbjct: 17 IFVAEVPWTVSSKELKEYFSQFGSVQRCQLPFDKDTGFHKRYCWIKFSSPEEVQNVLQKD 76
Query: 304 KRTIGGKEVDVK 339
+ G ++ ++
Sbjct: 77 SHILEGAKLSLR 88
>UniRef50_Q83CD7 Cluster: Nucleic acid binding domain protein; n=3;
Coxiella burnetii|Rep: Nucleic acid binding domain
protein - Coxiella burnetii
Length = 103
Score = 52.4 bits (120), Expect = 3e-06
Identities = 24/76 (31%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL-K 297
KI+VG LS +++ DE+++FF ++G I E ++ D+ + KGF FIT+ ++ + + K
Sbjct: 5 KIYVGSLSYDVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFITYGTQDAAQEAVSK 64
Query: 298 TPKRTIGGKEVDVKRA 345
+ G+++ V A
Sbjct: 65 ANGIDLQGRKIRVNIA 80
>UniRef50_Q72SG0 Cluster: Glycine rich RNA-binding protein; n=4;
Leptospira|Rep: Glycine rich RNA-binding protein -
Leptospira interrogans serogroup Icterohaemorrhagiae
serovarcopenhageni
Length = 131
Score = 52.4 bits (120), Expect = 3e-06
Identities = 28/84 (33%), Positives = 45/84 (53%)
Frame = +1
Query: 85 KVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 264
++D ++ K KI VG L E+++DE++ FSEFGT+ EV + DKT + + I
Sbjct: 2 QIDSREGKIM--KISVGNLPQELTEDELKKIFSEFGTVEEVHIKKDKTTGRSLSYGSIEM 59
Query: 265 ESEQVVNDLLKTPKRTIGGKEVDV 336
E + K+ I GK++ V
Sbjct: 60 EDSAGAKAIAGLNKKEIQGKQIAV 83
>UniRef50_Q67W00 Cluster: Putative RRM-containing protein; n=2;
Oryza sativa|Rep: Putative RRM-containing protein -
Oryza sativa subsp. japonica (Rice)
Length = 343
Score = 52.4 bits (120), Expect = 3e-06
Identities = 24/79 (30%), Positives = 41/79 (51%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+FVGGL+ E + +R F ++G ILE + D+ + KG+ F+TF + ++
Sbjct: 40 KVFVGGLAWETPSEGLRRHFEQYGEILEAVVIADRLTGRSKGYGFVTFREAEAARRAVQD 99
Query: 301 PKRTIGGKEVDVKRATPKP 357
P I G+ + A+ P
Sbjct: 100 PNPMIAGRRANCNIASLGP 118
>UniRef50_UPI00015B48C0 Cluster: PREDICTED: similar to LOC443584
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to LOC443584 protein - Nasonia vitripennis
Length = 518
Score = 52.0 bits (119), Expect = 4e-06
Identities = 28/122 (22%), Positives = 57/122 (46%), Gaps = 5/122 (4%)
Frame = +1
Query: 7 FAFIVFKAPESIDKVMAAGEHTI--NNKKVDPKKAKARHGK---IFVGGLSSEISDDEIR 171
+ ++ FK +S + H + N +VD H + +F+G + +I++DE+R
Sbjct: 297 YVYVAFKEEQSAKDALKLNGHKLGENTLRVDLSTKNKDHDQKRAVFLGNIPFDITEDEVR 356
Query: 172 NFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATP 351
F G I V + D+ +G ++ FE++ V L+ + +E+ V+ +P
Sbjct: 357 KHFDSCGKIESVRIVKDRKSGLSRGIGYVNFENQDSVTLALELNGTNLKNREIRVQICSP 416
Query: 352 KP 357
+P
Sbjct: 417 EP 418
>UniRef50_O25501 Cluster: Ss-DNA binding protein 12RNP2; n=4;
Helicobacter|Rep: Ss-DNA binding protein 12RNP2 -
Helicobacter pylori (Campylobacter pylori)
Length = 82
Score = 52.0 bits (119), Expect = 4e-06
Identities = 22/77 (28%), Positives = 40/77 (51%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 303
I+VG L + ++++ FS+FG + V++ +D+ + KGF F+ + E V + K
Sbjct: 4 IYVGNLVYSATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVEMQEESVSEAIAKLD 63
Query: 304 KRTIGGKEVDVKRATPK 354
G+ + V A PK
Sbjct: 64 NTDFMGRTIRVTEANPK 80
>UniRef50_Q9LES2 Cluster: Putative uncharacterized protein
T8M16_190; n=3; Arabidopsis thaliana|Rep: Putative
uncharacterized protein T8M16_190 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 478
Score = 52.0 bits (119), Expect = 4e-06
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KI+V + +E+ ++ FFS+FG I E + DK + KGFC ++S + L+
Sbjct: 246 KIYVSNVGAELDPQKLLMFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSSESAKRALEE 305
Query: 301 PKRTIGGKEVDVKRAT--PKP 357
P +T G + ++A PKP
Sbjct: 306 PHKTFEGHILHCQKAIDGPKP 326
Score = 51.2 bits (117), Expect = 7e-06
Identities = 25/81 (30%), Positives = 42/81 (51%)
Frame = +1
Query: 115 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 294
H KIFV GL + + + F ++G I + + FDK + KG+ FI ++S + L
Sbjct: 139 HRKIFVHGLGWDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNAL 198
Query: 295 KTPKRTIGGKEVDVKRATPKP 357
K P++ IG + + A+ P
Sbjct: 199 KQPQKKIGSRMTACQLASKGP 219
>UniRef50_Q5JK61 Cluster: RNA recognition motif (RRM)-containing
protein-like; n=7; Oryza sativa|Rep: RNA recognition
motif (RRM)-containing protein-like - Oryza sativa
subsp. japonica (Rice)
Length = 310
Score = 52.0 bits (119), Expect = 4e-06
Identities = 25/75 (33%), Positives = 38/75 (50%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+FVGGL+ E + +R +F +FG ILE + DK + KG+ F+TF +
Sbjct: 22 KVFVGGLAWETQKEGMRGYFEQFGDILEAVVITDKNTGRSKGYGFVTFREPEAAMKACFD 81
Query: 301 PKRTIGGKEVDVKRA 345
P I G+ + A
Sbjct: 82 PYPVIDGRRANCNLA 96
>UniRef50_Q501B0 Cluster: At2g46780; n=3; core eudicotyledons|Rep:
At2g46780 - Arabidopsis thaliana (Mouse-ear cress)
Length = 336
Score = 52.0 bits (119), Expect = 4e-06
Identities = 25/75 (33%), Positives = 39/75 (52%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KIFVGGL+ E D +R +F +FG I+E + DK + KG+ F+TF+ + +
Sbjct: 23 KIFVGGLAWETQRDTMRRYFEQFGEIVEAVVITDKNTGRSKGYGFVTFKEAEAAMRACQN 82
Query: 301 PKRTIGGKEVDVKRA 345
I G+ + A
Sbjct: 83 MNPVIDGRRANCNLA 97
>UniRef50_A7AWX7 Cluster: RNA recognition motif. (A.k.a. RRM, RBD,
or RNP) domain containing protein; n=1; Babesia
bovis|Rep: RNA recognition motif. (A.k.a. RRM, RBD, or
RNP) domain containing protein - Babesia bovis
Length = 110
Score = 52.0 bits (119), Expect = 4e-06
Identities = 29/92 (31%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Frame = +1
Query: 76 NNKKVDPKKAKARH-GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFC 252
+++ + P ++K+R+ K+F+G L + S +R++F +FG I E +P D + KGF
Sbjct: 14 DSRSMAPTRSKSRNVPKLFIGRLDPDTSVGTMRHYFGQFGEIAEAYIPRDSYTLKGKGFG 73
Query: 253 FITF-ESEQVVNDLLKTPKRTIGGKEVDVKRA 345
F+TF + ++ + K I G+EV V A
Sbjct: 74 FLTFTHKDSILAVMQPNAKHYIDGREVVVDYA 105
>UniRef50_Q5A297 Cluster: Potential RNA binding protein; n=2;
Saccharomycetales|Rep: Potential RNA binding protein -
Candida albicans (Yeast)
Length = 145
Score = 52.0 bits (119), Expect = 4e-06
Identities = 26/89 (29%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Frame = +1
Query: 82 KKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFIT 261
K+V +H ++FVG L + +D+ ++ FS++ ++ +V +P D+ ++ KGF F+
Sbjct: 44 KQVTAPNWNPKHFRLFVGNLGPDGNDELLKEAFSKYPSMSQVHVPIDRKTSKNKGFGFVA 103
Query: 262 F-ESEQVVNDLLKTPKRTIGGKEVDVKRA 345
F +SE ++ + + IG V +KRA
Sbjct: 104 FGKSEDYLHAFQEMNGKYIGQHPVQLKRA 132
>UniRef50_Q03251 Cluster: Glycine-rich RNA-binding protein 8; n=74;
cellular organisms|Rep: Glycine-rich RNA-binding protein
8 - Arabidopsis thaliana (Mouse-ear cress)
Length = 169
Score = 52.0 bits (119), Expect = 4e-06
Identities = 22/71 (30%), Positives = 46/71 (64%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
+ FVGGL+ +D++++ FS+FG +++ ++ D+ + +GF F+TF+ E+ + D ++
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIE- 65
Query: 301 PKRTIGGKEVD 333
+ GKE+D
Sbjct: 66 ---EMNGKELD 73
>UniRef50_UPI0000498DFA Cluster: splicing factor; n=2; Entamoeba
histolytica HM-1:IMSS|Rep: splicing factor - Entamoeba
histolytica HM-1:IMSS
Length = 370
Score = 51.6 bits (118), Expect = 5e-06
Identities = 21/69 (30%), Positives = 43/69 (62%)
Frame = +1
Query: 64 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRK 243
E +N+K+ ++ + +FV GL++E S++EI+ FF++ G ++ VE D T + +
Sbjct: 106 EEEVNDKESIMQQIEKERRTVFVRGLTTEASNEEIKEFFNQAGEVVHVEQVIDTTTKRSR 165
Query: 244 GFCFITFES 270
GF ++ F++
Sbjct: 166 GFGYVEFKT 174
>UniRef50_Q9SYP9 Cluster: F9H16.14 protein; n=6; core
eudicotyledons|Rep: F9H16.14 protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 288
Score = 51.6 bits (118), Expect = 5e-06
Identities = 24/76 (31%), Positives = 38/76 (50%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+FVGGL+ E + +R F ++G ILE + DK + KG+ F+TF +
Sbjct: 25 KVFVGGLAWETQSETLRRHFDQYGDILEAVVITDKNTGRSKGYGFVTFRDPEAARRACVD 84
Query: 301 PKRTIGGKEVDVKRAT 348
P I G+ + A+
Sbjct: 85 PTPIIDGRRANCNLAS 100
>UniRef50_Q8LLE6 Cluster: RNA-binding protein AKIP1; n=7; core
eudicotyledons|Rep: RNA-binding protein AKIP1 - Vicia
faba (Broad bean)
Length = 515
Score = 51.6 bits (118), Expect = 5e-06
Identities = 27/83 (32%), Positives = 43/83 (51%)
Frame = +1
Query: 109 ARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVND 288
A H KIFV GL + + + N FS++G I + + DK + KG+ FI F+ +
Sbjct: 148 ASHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKASGKSKGYGFILFKKRSGARN 207
Query: 289 LLKTPKRTIGGKEVDVKRATPKP 357
LK P++ IG + + A+ P
Sbjct: 208 ALKEPQKKIGNRMTACQLASIGP 230
Score = 46.4 bits (105), Expect = 2e-04
Identities = 22/79 (27%), Positives = 38/79 (48%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KI++ + E+ ++ +FS FG I E + DK + KGFC ++S + L+
Sbjct: 252 KIYISNVGPELDPHKLFAYFSRFGEIEEGPLGLDKATGKPKGFCLFVYKSAESARRSLEE 311
Query: 301 PKRTIGGKEVDVKRATPKP 357
P + G + +RA P
Sbjct: 312 PHKEFEGHILHCQRAIDGP 330
>UniRef50_A7PG81 Cluster: Chromosome chr6 scaffold_15, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr6 scaffold_15, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 410
Score = 51.6 bits (118), Expect = 5e-06
Identities = 31/131 (23%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKV------------DPKK-AKARHGKIFVGGL 141
+G+ F++FK K + + I N+ +P A +++VG +
Sbjct: 120 KGYGFVLFKTRSGARKALKQPQKKIGNRMAACHLAAAGPSGSNPAAGADVNERRLYVGNV 179
Query: 142 SSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGG 321
+IS +++R FF++FG I + + FDK + +GF I F++ + + L+ P +T
Sbjct: 180 GPQISAEKLRTFFAKFGEIEDGPLGFDKATGKFRGFAIIVFKTAEGMKRALEEPIKTFES 239
Query: 322 KEVDVKRATPK 354
++ R K
Sbjct: 240 CKLQCSRKVAK 250
>UniRef50_A5BIG2 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 408
Score = 51.6 bits (118), Expect = 5e-06
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+FV GLS S+ +R F FG ++EV++ DK + KG+ FI + +E+ + LK
Sbjct: 317 KLFVTGLSFYTSEKTLRGAFEGFGELVEVKIIMDKISKRSKGYAFIEYSTEEAASAALKE 376
Query: 301 PK-RTIGGKEVDVKRATPKP 357
+ I G + V A P P
Sbjct: 377 MNGKIINGWMIVVDVAKPTP 396
>UniRef50_Q5CSH1 Cluster: Ro ribonucleoprotein-binding protein 1,
RNA binding protein with 3x RRM domains; n=2;
Cryptosporidium|Rep: Ro ribonucleoprotein-binding
protein 1, RNA binding protein with 3x RRM domains -
Cryptosporidium parvum Iowa II
Length = 693
Score = 51.6 bits (118), Expect = 5e-06
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
+I+VG L +++ +++ F FG I+ ++MP + N+ KGFCFI + S++ L T
Sbjct: 291 RIYVGSLDYSLNEADLKQVFGSFGPIVNIDMP--REGNRSKGFCFIEYTSQESAEMALAT 348
Query: 301 PKR-TIGGKEVDVKRAT 348
R + G+ + V R T
Sbjct: 349 MNRFVLKGRPIRVGRPT 365
Score = 39.1 bits (87), Expect = 0.030
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEM-PFDKTKNQRKGFCFITFESEQVVNDLLK 297
+I++G + + D++R+ F FG IL ++ P + +G+ FI F + ++
Sbjct: 425 RIYIGSVPYSFTTDDLRHIFKTFGVILSCQLIPSIEKPGTHRGYGFIEFGTADQAKLAIE 484
Query: 298 TPKR-TIGGKEVDVKRAT 348
T +GGK++ V AT
Sbjct: 485 TMNGFEVGGKQLKVNVAT 502
>UniRef50_Q5BXS3 Cluster: SJCHGC01369 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC01369 protein - Schistosoma
japonicum (Blood fluke)
Length = 386
Score = 51.6 bits (118), Expect = 5e-06
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR-HG-------KIFVGGLSSEIS 156
+G+ FI F A + + A HTI N++ D + ++ G K+ VGGL+ +IS
Sbjct: 144 KGYGFIRF-ADYAAQVMCLAERHTIENRQCDVRIPISKMEGDRQDVARKVHVGGLTEDIS 202
Query: 157 DDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDV 336
+ +R FS++G + +V +P + F FITF+ +V LL + I G + +
Sbjct: 203 PETLRQHFSQYGRVSDVFIP-----KPFRSFAFITFDDPEVAASLLGKDQE-IQGVRISI 256
Query: 337 KRATPK 354
A PK
Sbjct: 257 GSAVPK 262
Score = 39.5 bits (88), Expect = 0.023
Identities = 22/94 (23%), Positives = 46/94 (48%)
Frame = +1
Query: 58 AGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQ 237
A E + ++K + K + V L +D +R++FS++G ++ +++ D Q
Sbjct: 83 ADEDSWDSKMKQKRFDKKTCTDLIVLNLPWRADEDTLRDYFSQYGDLVMIQIKRDPVTQQ 142
Query: 238 RKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVK 339
KG+ FI F ++ + + TI ++ DV+
Sbjct: 143 SKGYGFIRF-ADYAAQVMCLAERHTIENRQCDVR 175
>UniRef50_A7AQD9 Cluster: RNA recognition motif containing protein;
n=1; Babesia bovis|Rep: RNA recognition motif containing
protein - Babesia bovis
Length = 187
Score = 51.6 bits (118), Expect = 5e-06
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 303
I+VG L +++ IR +F +FGT+ ++ + K +G+CF+ FES ++ +
Sbjct: 12 IYVGNLPKALNESNIRKYFEQFGTVKKIRLMKSKKTGNSRGYCFLQFESNEIAKIAAEAM 71
Query: 304 KR-TIGGK--EVDVKRATP 351
I G+ +V+VK TP
Sbjct: 72 NNYFIDGRVLKVEVKEITP 90
>UniRef50_Q6BQ88 Cluster: Debaryomyces hansenii chromosome E of
strain CBS767 of Debaryomyces hansenii; n=3;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
E of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 183
Score = 51.6 bits (118), Expect = 5e-06
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +1
Query: 112 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 291
+H ++FVG L ++ +D+ + N F ++ T+ +V++P D + KG+ F+ FES
Sbjct: 84 KHFRLFVGNLGTDATDELLANAFGKYKTLSKVKVPMDNKTGKNKGYGFVAFESPDDYFQA 143
Query: 292 LKTPK-RTIGGKEVDVKRA 345
K + IG V +KRA
Sbjct: 144 FKDMNGKYIGQHPVQLKRA 162
>UniRef50_UPI0000EB42F3 Cluster: UPI0000EB42F3 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB42F3 UniRef100
entry - Canis familiaris
Length = 133
Score = 51.2 bits (117), Expect = 7e-06
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +1
Query: 109 ARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVND 288
+ GK+FVGGL+ ++ + + FS FG I EV + D+ + +GF FITF + + +D
Sbjct: 3 SEEGKLFVGGLNFITNEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFSNPEYASD 62
Query: 289 LLKTPK-RTIGGKEVDV 336
++ ++ G+++ V
Sbjct: 63 TMRAMNGESLDGRQICV 79
>UniRef50_A7CQC8 Cluster: RNP-1 like RNA-binding protein; n=1;
Opitutaceae bacterium TAV2|Rep: RNP-1 like RNA-binding
protein - Opitutaceae bacterium TAV2
Length = 106
Score = 51.2 bits (117), Expect = 7e-06
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +1
Query: 115 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE-SEQVVNDL 291
+ K++VG LS S+ ++R FS GT+ +V + D+ + +GF F+TF+ +E+
Sbjct: 2 NSKLYVGNLSFNTSEADLRTAFSTCGTLTDVFLATDRETGRPRGFAFVTFDTAEESQLAT 61
Query: 292 LKTPKRTIGGKEVDVKRATPK 354
K +GG+ + V A PK
Sbjct: 62 EKLNGTDLGGRAITVNEARPK 82
>UniRef50_Q9FI08 Cluster: Similarity to RNA-binding protein; n=1;
Arabidopsis thaliana|Rep: Similarity to RNA-binding
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 169
Score = 51.2 bits (117), Expect = 7e-06
Identities = 25/75 (33%), Positives = 40/75 (53%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KI+VGGL + + NFF FG I+ V + D+ ++ +G+ F+TF+ + K
Sbjct: 14 KIYVGGLPWTTRKEGLINFFKRFGEIIHVNVVCDRETDRSQGYGFVTFKDAESATRACKD 73
Query: 301 PKRTIGGKEVDVKRA 345
P TI G+ + K A
Sbjct: 74 PNPTIEGRITNCKLA 88
>UniRef50_Q8VXC4 Cluster: Glycine rich RNA binding protein; n=20;
Magnoliophyta|Rep: Glycine rich RNA binding protein -
Oryza sativa (Rice)
Length = 194
Score = 51.2 bits (117), Expect = 7e-06
Identities = 27/76 (35%), Positives = 43/76 (56%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
+ FVGGL+ D + FS +G ILE ++ D+ + +GF F+TF SEQ + D ++
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIE- 67
Query: 301 PKRTIGGKEVDVKRAT 348
+ GKE+D + T
Sbjct: 68 ---GMNGKELDGRNIT 80
>UniRef50_Q10N14 Cluster: RNA recognition motif family protein,
expressed; n=1; Oryza sativa (japonica
cultivar-group)|Rep: RNA recognition motif family
protein, expressed - Oryza sativa subsp. japonica (Rice)
Length = 310
Score = 51.2 bits (117), Expect = 7e-06
Identities = 25/76 (32%), Positives = 37/76 (48%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+FVGGL+ E D +R F FG ILE + DK + KG+ F+TF+ +
Sbjct: 34 KVFVGGLAWETHKDTLREHFERFGDILEAVIISDKLTGRSKGYGFVTFKEADAAKKACED 93
Query: 301 PKRTIGGKEVDVKRAT 348
I G+ + A+
Sbjct: 94 ATPVINGRRANCNLAS 109
>UniRef50_O24306 Cluster: Ribonucleoprotein; n=3; Pisum sativum|Rep:
Ribonucleoprotein - Pisum sativum (Garden pea)
Length = 291
Score = 51.2 bits (117), Expect = 7e-06
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
+++VG LS E+ D + FSE G ++ + +D+ + +GF F+T E+ +ND +
Sbjct: 207 RVYVGNLSWELDDSRLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEKEMNDAIAA 266
Query: 301 -PKRTIGGKEVDVKRATPKP 357
+ + G+ + V A +P
Sbjct: 267 LDGQILEGRTIKVSVAEDRP 286
Score = 41.9 bits (94), Expect = 0.004
Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLK 297
K+FVG L ++ +++ F GT+ E+ +++ +Q +GF F+T + E+ K
Sbjct: 110 KLFVGNLPYDVDSEKLAMLFEPAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEAGAAK 169
Query: 298 TPKRTIGGKEVDVKRATPK 354
+ G+ + V +A P+
Sbjct: 170 FNRYDYNGRPLTVNKAAPR 188
>UniRef50_A7QLH7 Cluster: Chromosome undetermined scaffold_119,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_119, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 409
Score = 51.2 bits (117), Expect = 7e-06
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+FV GLS S+ +R F FG ++EV++ DK + KG+ FI + +E+ + LK
Sbjct: 318 KLFVTGLSFYTSEKTLRGAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKE 377
Query: 301 PK-RTIGGKEVDVKRATPKP 357
+ I G + V A P P
Sbjct: 378 MNGKIINGWMIVVDVAKPTP 397
>UniRef50_Q95QL3 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 394
Score = 51.2 bits (117), Expect = 7e-06
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Frame = +1
Query: 13 FIVFKAPESIDKVMAAG-----EHTINNKKVDPKKAK-ARHGKIFVGGLSSEISDDEIRN 174
++ F A ES++K + +H I KV KK + + IFVG L EI++D +
Sbjct: 205 YVKFGAEESVEKALKYNGTKLDDHVIRVDKVGSKKKEFGKDMAIFVGNLPFEITEDALIT 264
Query: 175 FFS-EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVN 285
FFS + G + V + DK + KGF F+ F+ + V+
Sbjct: 265 FFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS 302
Score = 31.5 bits (68), Expect = 6.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEM 213
+FVG + +++ +R FS+FGTI V M
Sbjct: 145 VFVGNMPLTMNEKSVRRIFSDFGTISSVRM 174
>UniRef50_Q1JSB7 Cluster: RNA binding protein, putative; n=1;
Toxoplasma gondii|Rep: RNA binding protein, putative -
Toxoplasma gondii
Length = 475
Score = 51.2 bits (117), Expect = 7e-06
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+F+G + ++++E+R FFS +GT+ EV + D +N KG CF+ F ++ ++T
Sbjct: 138 KLFIGSIPRTMTEEEVRQFFSTYGTVEEVFVMKDNVQNTGKGCCFVKFAFKEEALHAVRT 197
Query: 301 --PKRTIGG--KEVDVKRATPK 354
K T G + V+V+ A K
Sbjct: 198 LSGKHTFEGCTRPVEVRFAESK 219
Score = 36.3 bits (80), Expect = 0.21
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 270
K+FVG + + D +R F EFG + E + DK + K FI +S
Sbjct: 38 KLFVGRVPQSMEDAALRPIFEEFGEVKEAVIIRDKATGKHKNSAFIKMDS 87
Score = 32.3 bits (70), Expect = 3.4
Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Frame = +1
Query: 52 MAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK 231
MAAG +N + P IFV + +E + ++ F FG ++ + D+T
Sbjct: 329 MAAGSGQSSNAEGPPG------ANIFVFHVPNEWTYYDLMQNFGGFGNVVSARVATDRTT 382
Query: 232 NQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEVDV 336
+ +GF F+++++ E + GGK + V
Sbjct: 383 GRNRGFAFVSYDNVESAATAVNNMNGFMAGGKRLKV 418
>UniRef50_P19684 Cluster: 33 kDa ribonucleoprotein, chloroplast
precursor; n=8; core eudicotyledons|Rep: 33 kDa
ribonucleoprotein, chloroplast precursor - Nicotiana
sylvestris (Wood tobacco)
Length = 324
Score = 51.2 bits (117), Expect = 7e-06
Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Frame = +1
Query: 55 AAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKN 234
A E I K+ + G+++VG L ++ ++ F+E GT+ VE+ +D+ +
Sbjct: 93 AEEEEEIEEKEERVESESVEGGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTD 152
Query: 235 QRKGFCFITFESEQVVNDLLKT-PKRTIGGKEVDV 336
+ +GF F+T S + + ++ +GG+ V V
Sbjct: 153 RSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKV 187
Score = 40.7 bits (91), Expect = 0.010
Identities = 17/60 (28%), Positives = 35/60 (58%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K++V LS ++ +R+ F++ + ++ +D++ + +GF FITF S + +N L T
Sbjct: 218 KLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDT 277
>UniRef50_P49314 Cluster: 31 kDa ribonucleoprotein, chloroplast
precursor; n=10; core eudicotyledons|Rep: 31 kDa
ribonucleoprotein, chloroplast precursor - Nicotiana
plumbaginifolia (Leadwort-leaved tobacco)
Length = 292
Score = 51.2 bits (117), Expect = 7e-06
Identities = 22/80 (27%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
+++VG LS + D ++ FSE G +++ ++ +D+ + +GF F+T+ S + VND + +
Sbjct: 209 RVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDS 268
Query: 301 PKR-TIGGKEVDVKRATPKP 357
+ G+ + V A +P
Sbjct: 269 LNGIDLDGRSIRVSAAEERP 288
Score = 38.3 bits (85), Expect = 0.052
Identities = 19/71 (26%), Positives = 35/71 (49%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+FVG L + + F G + VE+ +DK + +GF F+T +++ V +
Sbjct: 89 KLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEV----EA 144
Query: 301 PKRTIGGKEVD 333
++ G E+D
Sbjct: 145 AEQQFNGYEID 155
>UniRef50_Q8T6B9 Cluster: Poly(U)-binding-splicing factor half pint
(68 kDa poly(U)-binding- splicing factor); n=7;
Coelomata|Rep: Poly(U)-binding-splicing factor half pint
(68 kDa poly(U)-binding- splicing factor) - Drosophila
melanogaster (Fruit fly)
Length = 637
Score = 51.2 bits (117), Expect = 7e-06
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = +1
Query: 85 KVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 264
+V ++A A +++VG +S E+ +D IR F+ FG I + M +D + KGF F+ +
Sbjct: 119 QVQRQQALALMCRVYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEY 178
Query: 265 ESEQVVNDLLKTPKRTI-GGKEVDVKRATPKP 357
E + L+ + GG+ + V R + P
Sbjct: 179 EIPEGAQLALEQMNGALMGGRNIKVGRPSNMP 210
>UniRef50_UPI0000E4A54D Cluster: PREDICTED: hypothetical protein;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 244
Score = 50.8 bits (116), Expect = 9e-06
Identities = 25/75 (33%), Positives = 39/75 (52%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KIFVGGL +D +R+ F +GTI E + D+T + KG+ F+T ++ K
Sbjct: 11 KIFVGGLPYHTTDKSLRDHFEIYGTIEEAVVITDRTSGKSKGYGFVTMSDQREAETATKE 70
Query: 301 PKRTIGGKEVDVKRA 345
I G++ +V A
Sbjct: 71 ANPIIDGRKANVNLA 85
>UniRef50_Q4TA11 Cluster: Chromosome undetermined SCAF7478, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF7478, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 579
Score = 50.8 bits (116), Expect = 9e-06
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Frame = +1
Query: 97 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 276
++A A +++VG + E+ +D IR F+ FG I ++M FD + KGF F+ +E +
Sbjct: 109 QRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSFDSVTMKHKGFAFVEYEMPE 168
Query: 277 VVNDLLKTPKRTI-GGKEV--DVKRATPKP 357
L+ + GG+ + V RA P
Sbjct: 169 AAQLALEQMNSVVLGGRNIKASVMRAPRAP 198
>UniRef50_Q2V9B8 Cluster: RNA-binding protein AKIP1-like; n=1;
Solanum tuberosum|Rep: RNA-binding protein AKIP1-like -
Solanum tuberosum (Potato)
Length = 498
Score = 50.8 bits (116), Expect = 9e-06
Identities = 22/88 (25%), Positives = 45/88 (51%)
Frame = +1
Query: 94 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 273
P ++ KIFV +++++ ++ +FS+FG + E + DK + KGFC +++
Sbjct: 249 PPVSEYTQRKIFVSNVAADLEPQKLLEYFSKFGEVEEGPLGLDKQSGKPKGFCLFVYKTV 308
Query: 274 QVVNDLLKTPKRTIGGKEVDVKRATPKP 357
+ L+ P +T G + ++A P
Sbjct: 309 EGARKALEEPHKTFEGHTLHCQKAIDGP 336
>UniRef50_A7QJZ9 Cluster: Chromosome undetermined scaffold_109,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_109, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 170
Score = 50.8 bits (116), Expect = 9e-06
Identities = 23/90 (25%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Frame = +1
Query: 94 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 273
P + +++V GLS +++ +RN F FG ++EV + DK N+ +GF F+ + +E
Sbjct: 71 PNQPSIPKTRLYVSGLSFRTTEESLRNAFETFGQLVEVNLVMDKIANRPRGFAFLRYSTE 130
Query: 274 QVVNDLLK-TPKRTIGGKEVDVKRATPKPD 360
+ ++ + + G+ + V+ A P+ +
Sbjct: 131 EESEKAIEGMHGKFLDGRVIFVEVAKPRSE 160
>UniRef50_Q6TMI9 Cluster: RNA-binding protein; n=3; Dictyostelium
discoideum|Rep: RNA-binding protein - Dictyostelium
discoideum (Slime mold)
Length = 551
Score = 50.8 bits (116), Expect = 9e-06
Identities = 26/96 (27%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Frame = +1
Query: 76 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSE--FGTILEVEMPFDKTKNQRKGF 249
NN K + + +IF GG++ ++++E+ F+E +LE+ + DK + KGF
Sbjct: 78 NNNNSISKSQRNANNEIFFGGVNKTVNEEELLEIFNENSDNNVLEIRLMKDKLTGESKGF 137
Query: 250 CFITFESEQVVNDLL-KTPKRTIGGKEVDVKRATPK 354
F+ F + +++ K ++I GK ++VK++ K
Sbjct: 138 GFVLFNDRSMCRNVIDKLNGKSIKGKIIEVKQSENK 173
Score = 34.7 bits (76), Expect = 0.64
Identities = 21/98 (21%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVM-AAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNF 177
+GF F++F V+ +I K ++ K+++ + K+F+G L ++S ++ +
Sbjct: 135 KGFGFVLFNDRSMCRNVIDKLNGKSIKGKIIEVKQSENKR-KLFIGNLPKDLSKEQFISI 193
Query: 178 FSEFGTILE-VEMPFDKTK-NQRKGFCFITFESEQVVN 285
F+E +E ++ + N+ +GF FI ++ + +
Sbjct: 194 FNEKTEGIESIDFLMSPDQPNKNRGFAFIEYQDHYLAD 231
>UniRef50_Q4N6Y8 Cluster: RNA-binding protein, putative; n=2;
Theileria|Rep: RNA-binding protein, putative - Theileria
parva
Length = 195
Score = 50.8 bits (116), Expect = 9e-06
Identities = 19/78 (24%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = +1
Query: 106 KARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVN 285
K ++ I+VG L ++++++++ +F++FG ++++ + + N+ +G+ F+ FE ++
Sbjct: 9 KNKNNVIYVGNLPKQLTEEQLKTYFNQFGDVIKIRLFKSRKTNRSRGYAFVQFEDHEIAK 68
Query: 286 DLLKT-PKRTIGGKEVDV 336
+T K I GK + V
Sbjct: 69 IAAETMDKYLIDGKSLKV 86
>UniRef50_Q0KHQ1 Cluster: CG33714-PA, isoform A; n=2; Diptera|Rep:
CG33714-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 90
Score = 50.8 bits (116), Expect = 9e-06
Identities = 24/83 (28%), Positives = 44/83 (53%)
Frame = +1
Query: 97 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 276
K K+ H +IFVG L + E+R +F EFG ++ + FDK KG+ F++F S
Sbjct: 9 KVGKSVH-RIFVGNLPWTVGHQELRGYFREFGRVVSANVIFDKRTGCSKGYGFVSFNSLT 67
Query: 277 VVNDLLKTPKRTIGGKEVDVKRA 345
+ + K + G ++++++
Sbjct: 68 ALEKIENEQKHILEGNYLNIQKS 90
>UniRef50_O74978 Cluster: Nucleolar RNA-binding protein NIFK; n=1;
Schizosaccharomyces pombe|Rep: Nucleolar RNA-binding
protein NIFK - Schizosaccharomyces pombe (Fission yeast)
Length = 276
Score = 50.8 bits (116), Expect = 9e-06
Identities = 25/79 (31%), Positives = 42/79 (53%)
Frame = +1
Query: 64 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRK 243
E TI K + K + + G ++VG L + ++R +FS+FG +L + M ++ K
Sbjct: 87 EKTIKKKVSENKNLQKKKGVLYVGRLPHGFYEKQMRMYFSQFGPVLRLRMSRNRKTGSSK 146
Query: 244 GFCFITFESEQVVNDLLKT 300
+ FI FES V N + +T
Sbjct: 147 HYAFIEFESLDVANVVAET 165
>UniRef50_A5DZJ4 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 601
Score = 50.8 bits (116), Expect = 9e-06
Identities = 24/78 (30%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLKT 300
IFVG LSSE++D+ ++ F++FG++ + + +D ++ +G+ F+TF + E N L
Sbjct: 195 IFVGDLSSEVNDEALKKAFTKFGSLKQAHVMWDMQTSRSRGYGFVTFGKQEDAENALQSM 254
Query: 301 PKRTIGGKEVDVKRATPK 354
+GG+ + A+ K
Sbjct: 255 NGEWLGGRAIRCNWASHK 272
>UniRef50_Q9HEQ9 Cluster: Single-stranded TG1-3 DNA-binding protein;
n=1; Schizosaccharomyces pombe|Rep: Single-stranded
TG1-3 DNA-binding protein - Schizosaccharomyces pombe
(Fission yeast)
Length = 348
Score = 50.8 bits (116), Expect = 9e-06
Identities = 29/111 (26%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Frame = +1
Query: 34 ESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEM 213
+ ++ + A H + P + +A ++FVG LS+ EIR+ F GT+ +V +
Sbjct: 17 DQVEASVDAAVHASAEQSNTPAQ-QADDFRVFVGRLSTSTKKSEIRSLFETVGTVRKVTI 75
Query: 214 PFDKTKNQRK----GFCFITFESEQVVNDLLKTPK-RTIGGKEVDVKRATP 351
PF + + + G F+TF +++ V+ ++T +T+ +E+ V++A P
Sbjct: 76 PFRRVRRGTRLVPSGIAFVTFNNQEDVDKAIETLNGKTLDDREIVVQKARP 126
>UniRef50_UPI0000587D6B Cluster: PREDICTED: similar to 2410104I19Rik
protein; n=2; Coelomata|Rep: PREDICTED: similar to
2410104I19Rik protein - Strongylocentrotus purpuratus
Length = 595
Score = 50.4 bits (115), Expect = 1e-05
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +1
Query: 97 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 276
++A A +++VG +S E+ +D IR F FG I + M +D + KGF F+ ++ +
Sbjct: 125 QRAIALMCRVYVGSISFELKEDTIRQAFHPFGPIKSINMSWDPITMKHKGFAFVEYDLPE 184
Query: 277 VVNDLLKTPKRT-IGGKEVDVKRATPKP 357
L+ IGG+ + V R + P
Sbjct: 185 AAQLALEQMNGVMIGGRNIKVGRPSNMP 212
>UniRef50_Q02AB7 Cluster: RNP-1 like RNA-binding protein; n=2;
cellular organisms|Rep: RNP-1 like RNA-binding protein -
Solibacter usitatus (strain Ellin6076)
Length = 132
Score = 50.4 bits (115), Expect = 1e-05
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 303
IFVG L S++ +R+ F +G + + D+ + +GF F+ E+E + +
Sbjct: 4 IFVGNLDFNASEEGVRSLFERYGQVNSARIMTDRETGRSRGFAFVEMENEGEADQAISAL 63
Query: 304 K-RTIGGKEVDVKRATPKPD 360
T+ G+ ++V A PKPD
Sbjct: 64 NGYTLDGRALNVNEARPKPD 83
>UniRef50_Q8GU29 Cluster: Glycin-rich RNA binding protein; n=6;
cellular organisms|Rep: Glycin-rich RNA binding protein
- Polytomella sp. Pringsheim 198.80
Length = 177
Score = 50.4 bits (115), Expect = 1e-05
Identities = 20/77 (25%), Positives = 42/77 (54%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
+++VG LS ++++R +F +FG + E + D+ + +GF F+T ++ + + KT
Sbjct: 4 RLYVGNLSWNAKEEDLRTYFGKFGEVEEASIALDRESGRSRGFGFVTLPADVAKDAIEKT 63
Query: 301 PKRTIGGKEVDVKRATP 351
G+ + V A+P
Sbjct: 64 NGAEFMGRNIKVNEASP 80
>UniRef50_Q40437 Cluster: RGP-3; n=2; Nicotiana|Rep: RGP-3 -
Nicotiana sylvestris (Wood tobacco)
Length = 144
Score = 50.4 bits (115), Expect = 1e-05
Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+FVGGLS D +R+ F+ FG +++ + D+ + +GF F+ F ++ N+ +K
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDECANEAIKA 98
Query: 301 -PKRTIGGKEVDVKRA 345
+ + G+ + V+ A
Sbjct: 99 MDGQELQGRNIRVRIA 114
>UniRef50_A7QT40 Cluster: Chromosome undetermined scaffold_165,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_165, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 685
Score = 50.4 bits (115), Expect = 1e-05
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Frame = +1
Query: 97 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF---- 264
++ K + ++FVGGL ++++D++ +FF + G I EV + + + KGF FI F
Sbjct: 84 ERRKRKEFEVFVGGLDRDVTEDDLFHFFRQVGDITEVRLMKNALTQKNKGFAFIRFATVE 143
Query: 265 ESEQVVNDLLKTPKRTIGGKEVDV 336
++ + VN+ LK P I GK+ V
Sbjct: 144 QARRAVNE-LKHP--VINGKQCGV 164
Score = 37.1 bits (82), Expect = 0.12
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 270
IF+ GL + +D +R++ +FG I ++E+ + +R F F+TF++
Sbjct: 270 IFLDGLPATWDEDRVRDYLKKFGRIEKIELARNMPAAKRTDFGFVTFDT 318
Score = 31.9 bits (69), Expect = 4.5
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFF 180
+GFAFI F E + + +H + N K +FVG + + +++
Sbjct: 132 KGFAFIRFATVEQARRAVNELKHPVINGKQCGVAPSQDSDTLFVGNICKTWTKVAVKDKL 191
Query: 181 SEFGTILEVEMPF-DKTKNQ--RKGFCFITFESEQVVNDLLKTPKR 309
+ +G ++ + TKN+ +GF F+ F S D L+ KR
Sbjct: 192 AYYGVDKYEDLTLVEDTKNEGMNRGFAFLDFSSRA---DALEACKR 234
>UniRef50_Q54BM2 Cluster: RNA-binding region-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: RNA-binding
region-containing protein - Dictyostelium discoideum AX4
Length = 565
Score = 50.4 bits (115), Expect = 1e-05
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 12/130 (9%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMA-AGEHTINNKKV--DPKKAKARHGK--------IFVGGLSS 147
+GF F+ ++ ES DK +A IN +KV P K+ G+ +F LS
Sbjct: 138 KGFGFVHYETQESADKAIAKVNGMMINGQKVFVGPFKSSKERGQPTEVKFTNVFFKNLSE 197
Query: 148 EISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK-RTIGGK 324
++ D+++ ++G I + + D K + KGF F FES + ++++ + GK
Sbjct: 198 DVGPDQLKELLQQYGEITNITIMADD-KGKSKGFGFANFESAEAAKNVVENENGKIFHGK 256
Query: 325 EVDVKRATPK 354
+ RA K
Sbjct: 257 PIYAGRAQKK 266
Score = 40.3 bits (90), Expect = 0.013
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +1
Query: 91 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 270
DP K+ G +F+ L I + + FS FG IL ++ D N KGF F+ +E+
Sbjct: 89 DPSLRKSGVGNVFIKNLDKGIDHKALYDTFSAFGNILSCKVVTD-DGNSSKGFGFVHYET 147
Query: 271 EQVVND-LLKTPKRTIGGKEVDV 336
++ + + K I G++V V
Sbjct: 148 QESADKAIAKVNGMMINGQKVFV 170
Score = 38.3 bits (85), Expect = 0.052
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 300
+++ + I +D++R FS+FGTI + D KGF F+ + + ++ + +
Sbjct: 286 LYIKNIDDSIDNDKLREVFSQFGTITSAIVMKDDKATTSKGFGFVCYTAPDEATRAVTEM 345
Query: 301 PKRTIGGKEVDVKRATPK 354
R IG K + V A K
Sbjct: 346 NGRMIGTKPLYVALAQRK 363
>UniRef50_Q6CG61 Cluster: Similar to sp|P31209 Schizosaccharomyces
pombe Polyadenylate-binding protein; n=1; Yarrowia
lipolytica|Rep: Similar to sp|P31209 Schizosaccharomyces
pombe Polyadenylate-binding protein - Yarrowia
lipolytica (Candida lipolytica)
Length = 589
Score = 50.4 bits (115), Expect = 1e-05
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Frame = +1
Query: 10 AFI-VFKAPESIDKVMAAGEHTINNKKVDP-KKAKARHGKIFVGGLSSEISDDEIRNFFS 183
AF+ VF E KV++ + N ++ P + K +FV GLS E +++ +R F
Sbjct: 155 AFVAVFPTAEEASKVLS---DELANLEISPVRDPKTHFTNLFVRGLSRETTEEALRAEFE 211
Query: 184 EFGTILEVEMPFDKTKNQRKGFCFITFESEQ-VVNDLLKTPKRTIGGKEVDVKRATPK 354
FG + + +P D++ ++ KGF F+ FE + V + + G + V RA K
Sbjct: 212 RFGAVTSLLLPLDES-HRAKGFGFVNFEEHRDAVTAVAALDGAELCGARISVSRAQSK 268
Score = 41.9 bits (94), Expect = 0.004
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +1
Query: 109 ARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVN 285
AR +++ L+ I+++ +R +FS+FG I V + D N KGF F+ F + + N
Sbjct: 290 ARGTNLYITNLNPAINNERLRAYFSKFGEITSVRIMLDAVGNS-KGFGFVCFRDPDHASN 348
Query: 286 DLLKTPKRTIGGKEVDVKRATPK 354
+ + R I G + V A K
Sbjct: 349 AIAEMHNRPIEGNVLQVAIAHKK 371
>UniRef50_Q1DPW0 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 147
Score = 50.4 bits (115), Expect = 1e-05
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE-QVVNDLLK 297
K+F+GGL+ +D+ +R FS+FG+I E + D+ N+ +GF F+ F SE + + +
Sbjct: 3 KLFIGGLAWHTTDETLRQGFSKFGSIEEAIVVKDRDTNRSRGFGFVRFASEGEAEAAMNE 62
Query: 298 TPKRTIGGKEVDVKRATPKP 357
+ G+ + V +A +P
Sbjct: 63 MNNQEFDGRTIRVDKAADRP 82
>UniRef50_Q43349 Cluster: 29 kDa ribonucleoprotein, chloroplast
precursor; n=5; Arabidopsis thaliana|Rep: 29 kDa
ribonucleoprotein, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 342
Score = 50.4 bits (115), Expect = 1e-05
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
+++VG LS + D + N F+E G ++E + +D+ + KGF F+T S Q V + +
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 301 PK-RTIGGKEVDVKRATPKP 357
+ G+++ V A +P
Sbjct: 318 LNGADLDGRQIRVSEAEARP 337
Score = 39.1 bits (87), Expect = 0.030
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 270
K+FVG LS + ++ F G + VE+ +DK + +GF F+T +
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMST 149
>UniRef50_Q9WX39 Cluster: Putative RNA-binding protein rbpF; n=10;
Bacteria|Rep: Putative RNA-binding protein rbpF -
Anabaena sp. (strain PCC 7120)
Length = 105
Score = 50.4 bits (115), Expect = 1e-05
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK-T 300
I+VG LS E++ ++I N F+E+G++ V +P D+ + +GF F+ S+ ++
Sbjct: 3 IYVGNLSYEVTQEDISNVFAEYGSVKRVVLPTDRETGRLRGFAFVEMGSDAEETAAIEGL 62
Query: 301 PKRTIGGKEVDVKRATPKPD 360
G+++ V +A PK D
Sbjct: 63 DGAEWMGRDLKVNKAKPKED 82
>UniRef50_Q9UHX1 Cluster: Poly(U)-binding-splicing factor PUF60 (60
kDa poly(U)-binding-splicing factor); n=59;
Eumetazoa|Rep: Poly(U)-binding-splicing factor PUF60 (60
kDa poly(U)-binding-splicing factor) - Homo sapiens
(Human)
Length = 559
Score = 50.4 bits (115), Expect = 1e-05
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 18/137 (13%)
Frame = +1
Query: 1 RGFAFIVFKAPES-------IDKVMAAGEH-------TINNKK--VDPKKAKAR-HGKIF 129
+GFAF+ ++ PE+ ++ VM G + I + +D +AR +I+
Sbjct: 170 KGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEARAFNRIY 229
Query: 130 VGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKR 309
V + ++SDD+I++ F FG I + D T + KG+ FI +E Q D + +
Sbjct: 230 VASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNL 289
Query: 310 -TIGGKEVDVKRATPKP 357
+GG+ + V +A P
Sbjct: 290 FDLGGQYLRVGKAVTPP 306
Score = 49.6 bits (113), Expect = 2e-05
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 97 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 276
++A A +++VG + E+ +D IR F+ FG I ++M +D + KGF F+ +E +
Sbjct: 122 QRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPE 181
Query: 277 VVNDLLKTPKRT-IGGKEVDVKR 342
L+ +GG+ + V R
Sbjct: 182 AAQLALEQMNSVMLGGRNIKVGR 204
>UniRef50_UPI000049956B Cluster: RNA-binding protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: RNA-binding protein -
Entamoeba histolytica HM-1:IMSS
Length = 297
Score = 50.0 bits (114), Expect = 2e-05
Identities = 24/73 (32%), Positives = 40/73 (54%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 303
IFVG +SS ++ + F++ G +L V +P + N+R+GF + F S V L+
Sbjct: 114 IFVGKVSSITTESTLVKIFAKCGKVLRVTIPIWRNTNKRRGFAVVEFASLASVEKALELA 173
Query: 304 KRTIGGKEVDVKR 342
T+ GK++ V R
Sbjct: 174 NTTVDGKQITVMR 186
Score = 38.3 bits (85), Expect = 0.052
Identities = 26/94 (27%), Positives = 40/94 (42%)
Frame = +1
Query: 76 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 255
NN++ P + +F+G L + ++EIR F G I + M + Q KG CF
Sbjct: 3 NNERQKPYNPET---SVFIGKLPKSMKENEIREKFITCGRISRMMMQY-YPNGQSKGCCF 58
Query: 256 ITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKP 357
I FE ++ I + + V A KP
Sbjct: 59 IEFEDKKGAERACSRDGSIIDKQYIRVNMAEKKP 92
>UniRef50_Q4SJ02 Cluster: Chromosome 21 SCAF14577, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 21 SCAF14577, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 278
Score = 50.0 bits (114), Expect = 2e-05
Identities = 24/75 (32%), Positives = 37/75 (49%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KIFVGGL +D +R +F FG I E + D+ + +G+ F+T + K
Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRSAADRACKD 71
Query: 301 PKRTIGGKEVDVKRA 345
P I G++ +V A
Sbjct: 72 PNPIIDGRKANVNLA 86
>UniRef50_A5KRV2 Cluster: RNP-1 like RNA-binding protein; n=1;
candidate division TM7 genomosp. GTL1|Rep: RNP-1 like
RNA-binding protein - candidate division TM7 genomosp.
GTL1
Length = 108
Score = 50.0 bits (114), Expect = 2e-05
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK- 297
K+F+G L+ +DD +R F+E G + E ++ D+ + KGF F+T+ +++ + +K
Sbjct: 4 KLFIGSLAYATTDDSLRAHFAEKGEVEEAKVVTDRDSGRSKGFGFVTYVNDEDADTAIKE 63
Query: 298 TPKRTIGGKEVDVKRATPKPD 360
+ G+ + V A P+ +
Sbjct: 64 LDNSELDGRNIHVNEARPREE 84
>UniRef50_Q5CRM8 Cluster: T8M16_190-plant like protein with RRM
domain; n=2; Cryptosporidium|Rep: T8M16_190-plant like
protein with RRM domain - Cryptosporidium parvum Iowa II
Length = 600
Score = 50.0 bits (114), Expect = 2e-05
Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
Frame = +1
Query: 1 RGFAFIVFKAPESI-----DKVMAAGEHTINNKKVDP-----KKAKARHGKIFVGGLSSE 150
RG+AF+ FK ES + V +G + DP K++ A K+FV L E
Sbjct: 136 RGYAFVTFKTIESALLACKNPVSMSGRFLMVKLAADPFPFETKRSDAIRRKLFVRNLGFE 195
Query: 151 ISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEV 330
++D + ++G LE + + KG+ F+TF S + L+ P I G+ V
Sbjct: 196 TNEDSLSEVMGQYGE-LEESVILRTKSGESKGYGFVTFASSEATIKALQQPHHLIDGRLV 254
Query: 331 DVKRA 345
V +A
Sbjct: 255 FVHQA 259
>UniRef50_Q552N9 Cluster: RNA-binding region-containing protein;
n=2; Dictyostelium discoideum|Rep: RNA-binding
region-containing protein - Dictyostelium discoideum AX4
Length = 299
Score = 50.0 bits (114), Expect = 2e-05
Identities = 24/95 (25%), Positives = 44/95 (46%)
Frame = +1
Query: 61 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR 240
G IN P + I ++ + + ++ FFS+ G+I V +P + +
Sbjct: 142 GSLRINGANSKPSDGEGEPTTIVCRNIAFTVDETLVKEFFSKCGSISRVSLPVYEDSGRL 201
Query: 241 KGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 345
KGF F++F+SE V + G+E+ V+R+
Sbjct: 202 KGFAFVSFDSEDAVEKAIALTGTKFEGREIQVERS 236
Score = 35.9 bits (79), Expect = 0.28
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Frame = +1
Query: 34 ESIDKVMAAGEHTINNKKVDPKKAKARHG-----------KIFVGGLSSEISDDEIRNFF 180
ES D++ GE + ++K KK A K+FVG L S +++ +++ +F
Sbjct: 37 ESEDELKVVGEGSSSSKSTFTKKESAAKDESSNTKTDDDLKVFVGQLPSGVTEYDLKEYF 96
Query: 181 SEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 276
SE G I +++ N ++ FITF E+
Sbjct: 97 SECGDISNIKI---LNSNPQRVAAFITFADEK 125
>UniRef50_Q6ZR81 Cluster: CDNA FLJ46566 fis, clone THYMU3040829,
moderately similar to Cold- inducible RNA-binding
protein; n=1; Homo sapiens|Rep: CDNA FLJ46566 fis, clone
THYMU3040829, moderately similar to Cold- inducible
RNA-binding protein - Homo sapiens (Human)
Length = 135
Score = 50.0 bits (114), Expect = 2e-05
Identities = 22/59 (37%), Positives = 36/59 (61%)
Frame = +1
Query: 118 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 294
GK+FVGGLS + ++ + FS++G I EV + D+ + +GF F+TFE+ D +
Sbjct: 6 GKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAM 64
>UniRef50_A1CFG8 Cluster: Pre-mRNA splicing factor (Prp24), putative;
n=11; Eurotiomycetidae|Rep: Pre-mRNA splicing factor
(Prp24), putative - Aspergillus clavatus
Length = 1310
Score = 50.0 bits (114), Expect = 2e-05
Identities = 32/130 (24%), Positives = 63/130 (48%), Gaps = 12/130 (9%)
Frame = +1
Query: 1 RGFAFIVFKAPES------IDKVMAAGEHTINNKKVDPKKAKARHGKIFVG------GLS 144
R F ++ FK+ E +D + + K DP + + RHG I+ G +
Sbjct: 955 RRFCYVQFKSAEDAHNAVQLDGSKVGSDLNLVVKISDPSRKQDRHGPIYEGREIHVSNID 1014
Query: 145 SEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGK 324
+ S+D++++ FS++G + V +P K KGF +I F +++ N L ++ +
Sbjct: 1015 WKASEDDLKDLFSKYGRVETVRIP-RKVDGGSKGFGYIVFSTKEEANAALAMHEQEFRSR 1073
Query: 325 EVDVKRATPK 354
+ V+ +TP+
Sbjct: 1074 PLQVRLSTPQ 1083
Score = 43.2 bits (97), Expect = 0.002
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +1
Query: 34 ESIDKVMAAGEHTINNKKVDPKKAKARHGK---IFVGGLSSEISDDEIRNFFSEFGTILE 204
E+ D+ + A T + K +D + G +FV S + IRN F E+G I++
Sbjct: 886 ETRDEALVA--QTRDQKLIDDNAIEVHFGSGSTLFVTNFPSTADESYIRNLFHEYGEIID 943
Query: 205 VEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIG 318
V P K R+ FC++ F+S + ++ ++ +G
Sbjct: 944 VRFPSLKYNTHRR-FCYVQFKSAEDAHNAVQLDGSKVG 980
>UniRef50_P53316 Cluster: Uncharacterized RNA-binding protein
YGR250C; n=2; Saccharomyces cerevisiae|Rep:
Uncharacterized RNA-binding protein YGR250C -
Saccharomyces cerevisiae (Baker's yeast)
Length = 781
Score = 50.0 bits (114), Expect = 2e-05
Identities = 22/56 (39%), Positives = 36/56 (64%)
Frame = +1
Query: 97 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 264
K A G IFVGG++ +S E+ FS++G IL +++ +DKTK + G+ FI++
Sbjct: 188 KHALTYPGNIFVGGIAKSLSIGELSFLFSKYGPILSMKLIYDKTKGEPNGYGFISY 243
>UniRef50_Q15414 Cluster: RNA-binding motif protein, Y chromosome,
family 1 member A1; n=37; Homo/Pan/Gorilla group|Rep:
RNA-binding motif protein, Y chromosome, family 1 member
A1 - Homo sapiens (Human)
Length = 496
Score = 50.0 bits (114), Expect = 2e-05
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +1
Query: 118 GKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 297
GK+F+GGL+ E ++ ++ F + G I EV + D+T R GF FITFE+ + K
Sbjct: 8 GKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSR-GFAFITFENPADAKNAAK 66
Query: 298 TPK-RTIGGKEVDVKRA 345
+++ GK + V++A
Sbjct: 67 DMNGKSLHGKAIKVEQA 83
>UniRef50_Q44560 Cluster: Putative RNA-binding protein rbpA; n=4;
Bacteria|Rep: Putative RNA-binding protein rbpA -
Anabaena sp. (strain PCC 7120)
Length = 102
Score = 50.0 bits (114), Expect = 2e-05
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE-QVVNDLLKT 300
I+VG LS E++ D + F+E+GT+ V++P D+ Q +GF F+ SE + +
Sbjct: 3 IYVGNLSYEVTQDTLSAVFAEYGTVKRVQLPTDRETGQPRGFGFVEMGSEAEEAAAIEAL 62
Query: 301 PKRTIGGKEVDVKRATPKPD 360
G+++ V +A P+ D
Sbjct: 63 DGAEWMGRDLKVNKAKPRED 82
>UniRef50_UPI00015B621E Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 935
Score = 49.6 bits (113), Expect = 2e-05
Identities = 23/76 (30%), Positives = 39/76 (51%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 303
+FV L +++E+R I+ M D K + KGFC+++ SE+ VN+ LK
Sbjct: 691 VFVSNLDYTATEEEVREALKPIWPIISFRMVKD-FKGRSKGFCYVSLSSEEAVNEALKLD 749
Query: 304 KRTIGGKEVDVKRATP 351
+ I G+ + + R P
Sbjct: 750 RTRINGRPMFISRCDP 765
Score = 38.7 bits (86), Expect = 0.039
Identities = 29/133 (21%), Positives = 57/133 (42%), Gaps = 16/133 (12%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNK-----KVDPKKA----------KARHGKIFVG 135
+GF ++ + E++++ + IN + + DP K + K+FV
Sbjct: 729 KGFCYVSLSSEEAVNEALKLDRTRINGRPMFISRCDPDKTSRGPIFKYKTELEKNKLFVK 788
Query: 136 GLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ-VVNDLLKTPKRT 312
GLS + +++ N F G++ +V + KG ++ F+ E L+ T T
Sbjct: 789 GLSPTTTKEDLENIFRVHGSLKDVRI-VTYRNGHSKGLAYVEFDDENCAAKALVATDGMT 847
Query: 313 IGGKEVDVKRATP 351
I K ++V + P
Sbjct: 848 IADKVINVAISQP 860
>UniRef50_Q5PPI5 Cluster: Putative uncharacterized protein; n=1;
Rattus norvegicus|Rep: Putative uncharacterized protein
- Rattus norvegicus (Rat)
Length = 148
Score = 49.6 bits (113), Expect = 2e-05
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +1
Query: 109 ARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVND 288
+ GK+FVGGL+ + + + FS FG I EV + D+ + +GF FITF + + +D
Sbjct: 3 SEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASD 62
Query: 289 LLK 297
++
Sbjct: 63 AMR 65
>UniRef50_P73557 Cluster: RNA-binding protein; n=2;
Chroococcales|Rep: RNA-binding protein - Synechocystis
sp. (strain PCC 6803)
Length = 83
Score = 49.6 bits (113), Expect = 2e-05
Identities = 22/78 (28%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT- 300
I+VG LS + ++D++ FSE+GT+ V++P D+ + +GF F+ S++ + ++
Sbjct: 3 IYVGNLSYQATEDDVLTVFSEYGTVKRVQLPTDRETGRMRGFGFVEMSSDKEEDAAIEAL 62
Query: 301 PKRTIGGKEVDVKRATPK 354
G+++ V +A P+
Sbjct: 63 DGAEWMGRDLKVNKARPR 80
>UniRef50_Q8RYD4 Cluster: UBP1 interacting protein 1a; n=5;
Arabidopsis thaliana|Rep: UBP1 interacting protein 1a -
Arabidopsis thaliana (Mouse-ear cress)
Length = 344
Score = 49.6 bits (113), Expect = 2e-05
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Frame = +1
Query: 22 FKAPESIDKVMAAGE--HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGT 195
+ + +D V +A +I + V+ H KIFV GL E + + + F +G
Sbjct: 71 YSKDQLVDLVCSASRIGSSIYSAVVEAADRDVTHRKIFVYGLPWETTRETLVGVFEGYGE 130
Query: 196 ILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKP 357
I E + DK + KGF F+ F++ + + LK PK+ I + + A+ P
Sbjct: 131 IEECTVLIDKATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTATCQLASMGP 184
>UniRef50_Q2HTD6 Cluster: RNA-binding region RNP-1 (RNA recognition
motif); Calcium-binding EF- hand; n=1; Medicago
truncatula|Rep: RNA-binding region RNP-1 (RNA
recognition motif); Calcium-binding EF- hand - Medicago
truncatula (Barrel medic)
Length = 559
Score = 49.6 bits (113), Expect = 2e-05
Identities = 20/67 (29%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = +1
Query: 82 KKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFI 258
+K D ++ HG ++F+GGL + SDD++R G I+E+++ D+ + KG+ F+
Sbjct: 91 EKHDELLSRPPHGSEVFIGGLPRDTSDDDVRELCEPMGDIVEIKLIKDRETGESKGYAFV 150
Query: 259 TFESEQV 279
+++++V
Sbjct: 151 GYKTKEV 157
>UniRef50_Q10RZ0 Cluster: RNA recognition motif family protein,
expressed; n=2; Oryza sativa|Rep: RNA recognition motif
family protein, expressed - Oryza sativa subsp. japonica
(Rice)
Length = 110
Score = 49.6 bits (113), Expect = 2e-05
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLK 297
K+FVGG+ D+++R F FG + V MP D+ + GF FI F E ++N L
Sbjct: 8 KMFVGGIGPYTGDEDLRRHFQLFGYVASVHMPIDRHTGRHHGFAFIQFTCLEHLINAL-- 65
Query: 298 TPKRTIGGKEVDVKRATPK 354
+ TI G + + P+
Sbjct: 66 AYRHTIHGHTLGTRLIEPR 84
>UniRef50_A2AX49 Cluster: RNA recognition motif 1; n=1; Guillardia
theta|Rep: RNA recognition motif 1 - Guillardia theta
(Cryptomonas phi)
Length = 199
Score = 49.6 bits (113), Expect = 2e-05
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+FVGGLS E+ D ++ F EFG E ++ D+ + +GF F+TF E ++
Sbjct: 89 KLFVGGLSWEVDDQQLMEAFQEFGN-CEAKVMVDRYSGRSRGFGFVTFSEEHSAAKAIEE 147
Query: 301 PK-RTIGGKEVDVKRATPK 354
R + G+++ V A K
Sbjct: 148 MNGRELLGRQITVTHARQK 166
>UniRef50_Q9VHP3 Cluster: CG8021-PA; n=3; Diptera|Rep: CG8021-PA -
Drosophila melanogaster (Fruit fly)
Length = 91
Score = 49.6 bits (113), Expect = 2e-05
Identities = 23/79 (29%), Positives = 37/79 (46%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+FVG L I E+R +FS++G + E+ FD+ K + F+ F N
Sbjct: 11 KLFVGNLPWTIGSKELRTYFSKYGHVANAEVVFDRQLGLSKHYGFVVFSQRDAFNSASNQ 70
Query: 301 PKRTIGGKEVDVKRATPKP 357
+ G+ + V+RA P
Sbjct: 71 NTHFLDGRVLTVQRANESP 89
>UniRef50_Q9U2F5 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 434
Score = 49.6 bits (113), Expect = 2e-05
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +1
Query: 97 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESE 273
K +RH +FVG L SEI ++R F +FG + E ++ D N+ KG+ F+++ E
Sbjct: 125 KPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRRE 184
Query: 274 QVVNDLLKTPKRTIGGKEVDVKRATPKPD 360
+ + +G + + AT KPD
Sbjct: 185 DAERAIDEMNGAWLGRRTIRTNWATRKPD 213
Score = 34.7 bits (76), Expect = 0.64
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Frame = +1
Query: 67 HTINNKKVDP--KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR 240
H + K D +A A + ++VG +++ + +DEIR F FG I EV +
Sbjct: 237 HNQSEKTYDEIFNQAAADNTSVYVGNIAN-LGEDEIRRAFDRFGPINEVR------TFKI 289
Query: 241 KGFCFITFES-EQVVNDLLKTPKRTIGGKEV 330
+G+ F+ FE+ E +++ IGG+ V
Sbjct: 290 QGYAFVKFETKESAARAIVQMNNADIGGQIV 320
>UniRef50_O45189 Cluster: Suppressor protein 12; n=2;
Caenorhabditis|Rep: Suppressor protein 12 -
Caenorhabditis elegans
Length = 248
Score = 49.6 bits (113), Expect = 2e-05
Identities = 24/75 (32%), Positives = 37/75 (49%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KIFVGGL SD + +F +FG I E + D+ + +G+ F+T + K
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 301 PKRTIGGKEVDVKRA 345
P I G++ +V A
Sbjct: 96 PNPIIDGRKANVNLA 110
>UniRef50_Q6E3D9 Cluster: FOG-1; n=2; Caenorhabditis|Rep: FOG-1 -
Caenorhabditis brenneri
Length = 653
Score = 48.0 bits (109), Expect(2) = 2e-05
Identities = 29/76 (38%), Positives = 39/76 (51%)
Frame = +1
Query: 70 TINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGF 249
TIN + VD H +FVGGL ++ DEI FSEFG +L V + D+ KG
Sbjct: 327 TINERIVDV------HRTVFVGGLPRIVTADEIAQMFSEFGRVLIVTIDMDQDYAYPKGA 380
Query: 250 CFITFESEQVVNDLLK 297
+TFE + N L+
Sbjct: 381 ARVTFERDSSFNRALE 396
Score = 44.0 bits (99), Expect = 0.001
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +1
Query: 43 DKVMAAGE-HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 219
+K+ A + HT+ D K + KIFVGG+S ++ + I FF +FGT+ V+ P
Sbjct: 197 EKIYTAEDVHTVVKNNRDLTKQRIVSNKIFVGGISHSMNRELINTFFGQFGTVF-VDWPV 255
Query: 220 DKTKNQR 240
K N R
Sbjct: 256 KKKGNTR 262
Score = 21.0 bits (42), Expect(2) = 2e-05
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +1
Query: 7 FAFIVFKAPESIDKVMAAGEHT 72
+ F+V+ ES+ K+M A H+
Sbjct: 273 YLFLVYSEEESVFKLMNACTHS 294
>UniRef50_Q7ZT82 Cluster: RNA-binding protein; n=2; Danio rerio|Rep:
RNA-binding protein - Danio rerio (Zebrafish)
(Brachydanio rerio)
Length = 382
Score = 49.2 bits (112), Expect = 3e-05
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Frame = +1
Query: 31 PESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVE 210
P+S+ +A+G + KA+ ++ V + D ++R F +FG IL+VE
Sbjct: 119 PQSLSVSVASGSGAAGGSD-EEGGGKAQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVE 177
Query: 211 MPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTI-GGKEVDVKRATPK 354
+ F++ + KGF F+TFES + + TI G++++V AT +
Sbjct: 178 IIFNERGS--KGFGFVTFESAVEADRAREKLNGTIVEGRKIEVNNATAR 224
>UniRef50_Q3J7I0 Cluster: RNA-binding protein, RNP-1; n=1;
Nitrosococcus oceani ATCC 19707|Rep: RNA-binding
protein, RNP-1 - Nitrosococcus oceani (strain ATCC 19707
/ NCIMB 11848)
Length = 119
Score = 49.2 bits (112), Expect = 3e-05
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 303
I+VG LS +++D+++R F +G + ++ DK N+ KGF F+ S++ +K
Sbjct: 20 IYVGNLSYQVTDEDLRAAFENYGEVSSAKVIVDKFSNRSKGFGFVEMASKEDAEAAIKEM 79
Query: 304 KRT-IGGKEVDVKRATPK 354
+ I G++V V A P+
Sbjct: 80 HDSDIKGRQVVVNEARPR 97
>UniRef50_A3J4E6 Cluster: RNA binding protein; n=4; cellular
organisms|Rep: RNA binding protein - Flavobacteria
bacterium BAL38
Length = 111
Score = 49.2 bits (112), Expect = 3e-05
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL-KT 300
IFVG L + + ++R +F E+G + V++ DK + KGF F+ ++ + +
Sbjct: 3 IFVGSLPFSVEEADLRGYFEEYGAVESVKIISDKFTGRSKGFGFVEMANDAEAQKAIDEL 62
Query: 301 PKRTIGGKEVDVKRATPKPD 360
TI G+++ V ++ PKP+
Sbjct: 63 NGGTIEGRKIVVNKSEPKPE 82
>UniRef50_A7PIB0 Cluster: Chromosome chr13 scaffold_17, whole genome
shotgun sequence; n=2; core eudicotyledons|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 287
Score = 49.2 bits (112), Expect = 3e-05
Identities = 23/76 (30%), Positives = 40/76 (52%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+FVGGL+ E + +R+ F ++G ILE + DK + KG+ F+TF+ + +
Sbjct: 17 KVFVGGLAWETPKEAMRDHFEKYGEILEAVIISDKLTGRSKGYGFVTFKEPEAAKKACED 76
Query: 301 PKRTIGGKEVDVKRAT 348
I G+ + A+
Sbjct: 77 ATPMINGRRANCNLAS 92
>UniRef50_Q553V5 Cluster: Putative uncharacterized protein; n=4;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 91
Score = 49.2 bits (112), Expect = 3e-05
Identities = 25/78 (32%), Positives = 43/78 (55%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KIFV L + + ++N FS+FG I + + D+ + KGF F+ FES++ V + + +
Sbjct: 5 KIFVTRLPWSVCKEALKNHFSQFGNIKDCYVVLDRVTKRSKGFGFVQFESKESVQNAINS 64
Query: 301 PKRTIGGKEVDVKRATPK 354
I G+++ V A K
Sbjct: 65 DNE-INGRKLVVNEALAK 81
>UniRef50_Q4XN28 Cluster: RNA binding protein, putative; n=6;
Plasmodium|Rep: RNA binding protein, putative -
Plasmodium chabaudi
Length = 369
Score = 49.2 bits (112), Expect = 3e-05
Identities = 22/73 (30%), Positives = 38/73 (52%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K F+GG+ I++ I +F ++G + V + D + +GF F+T S + D + T
Sbjct: 104 KFFIGGIPQNITNKYISEYFEKYGPVQNVVIAQDHETKRNRGFAFVTM-SSHINKDKILT 162
Query: 301 PKRTIGGKEVDVK 339
+ GK VDV+
Sbjct: 163 DSHELNGKRVDVR 175
Score = 31.5 bits (68), Expect = 6.0
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKI 126
R F F+VF S+ KV+ H I +K V+ +KA+ + K+
Sbjct: 250 RCFGFVVFTNESSVAKVLKHKRHKIYDKMVEVRKAEPKKPKM 291
>UniRef50_A0BZZ4 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=4; Eukaryota|Rep: Chromosome
undetermined scaffold_14, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 260
Score = 49.2 bits (112), Expect = 3e-05
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +1
Query: 88 VDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 267
V P + + I++G L +++DD + F + G ++ V +P DK + +G+ F+ F+
Sbjct: 9 VPPLYERNQEATIYIGNLDQKVTDDIVWELFIQCGPVVNVHIPKDKISGEHQGYGFVEFK 68
Query: 268 SEQVVNDLLKTPKR-TIGGKEVDVKRAT 348
SE+ + +K + GK + V +A+
Sbjct: 69 SEEDADYAIKIMHMIKLYGKPIKVNKAS 96
Score = 44.0 bits (99), Expect = 0.001
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Frame = +1
Query: 1 RGFAFIVFKAPESID---KVMAA----GEHTINNKKVDPKKAKARHGKIFVGGLSSEISD 159
+G+ F+ FK+ E D K+M G+ NK K+ + +F+G L +EI +
Sbjct: 60 QGYGFVEFKSEEDADYAIKIMHMIKLYGKPIKVNKASQDKRTQEVGANLFIGNLDTEIDE 119
Query: 160 DEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEVDV 336
+ FS FG IL ++ + KG+ F+++++ E L + +G K + V
Sbjct: 120 KTLYETFSAFGHILSTKIMRNPETGVSKGYGFVSYDNFESSDGALTAMNGQFLGTKIIRV 179
Query: 337 KRATPK 354
+ A K
Sbjct: 180 EYAFKK 185
>UniRef50_Q59G98 Cluster: TIA1 protein variant; n=5;
Euteleostomi|Rep: TIA1 protein variant - Homo sapiens
(Human)
Length = 464
Score = 49.2 bits (112), Expect = 3e-05
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +1
Query: 115 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE-QVVNDL 291
H +FVG LS EI+ ++I+ F+ FG I + + D + KG+ F++F ++ N +
Sbjct: 143 HFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAI 202
Query: 292 LKTPKRTIGGKEVDVKRATPKP 357
+ + +GG+++ AT KP
Sbjct: 203 QQMGGQWLGGRQIRTNWATRKP 224
Score = 37.5 bits (83), Expect = 0.091
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLKT 300
++VG LS ++++ I FS+ G +M D N +CF+ F E L
Sbjct: 47 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGND--PYCFVEFHEHRHAAAALAAM 104
Query: 301 PKRTIGGKEVDVKRAT 348
R I GKEV V AT
Sbjct: 105 NGRKIMGKEVKVNWAT 120
>UniRef50_Q5KC60 Cluster: Polyadenylation factor 64 kDa subunit,
putative; n=2; Filobasidiella neoformans|Rep:
Polyadenylation factor 64 kDa subunit, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 455
Score = 49.2 bits (112), Expect = 3e-05
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT- 300
+FV + ++S++++ N FSE G + VE+ FD + KG+ F+ F E ++
Sbjct: 9 VFVANIPYDVSEEQLANVFSEAGPVANVEIKFDANTGRSKGYAFVQFYDEATALSAVRNL 68
Query: 301 PKRTIGGKEVDVKRATPKP 357
+ G+ + V+ +T +P
Sbjct: 69 QDAPVNGRNLRVELSTDEP 87
>UniRef50_P53883 Cluster: Nucleolar protein 13; n=5;
Saccharomycetales|Rep: Nucleolar protein 13 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 403
Score = 49.2 bits (112), Expect = 3e-05
Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 18/126 (14%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK-----------------IF 129
+GF ++ FK E + V+ E +N + + K ++ G+ +F
Sbjct: 183 KGFCYMFFKNVEQMKAVLELSESHLNGRNMLIKDSENYSGRPDKDDLVAMSKNPPSRILF 242
Query: 130 VGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ-VVNDLLKTPK 306
VG LS +++DD +R F G I+++ M + + KGF FI F++E+ N+L
Sbjct: 243 VGNLSFDVTDDLLRKHFQHCGDIVKIRMATFEDSGKCKGFAFIDFKNEEGSTNELKDKSC 302
Query: 307 RTIGGK 324
R I G+
Sbjct: 303 RKIAGR 308
>UniRef50_UPI00005A129E Cluster: PREDICTED: similar to Heterogeneous
nuclear ribonucleoprotein A1 (Helix-destabilizing
protein) (Single-strand binding protein) (hnRNP core
protein A1) (HDP); n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to Heterogeneous nuclear
ribonucleoprotein A1 (Helix-destabilizing protein)
(Single-strand binding protein) (hnRNP core protein A1)
(HDP) - Canis familiaris
Length = 200
Score = 48.8 bits (111), Expect = 4e-05
Identities = 17/57 (29%), Positives = 36/57 (63%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 294
IFVGG+ + + +R++F ++G I +E+ D+ +++GF F+TF+ V+ ++
Sbjct: 99 IFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 155
Score = 47.6 bits (108), Expect = 8e-05
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = +1
Query: 70 TINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE-VEMPFDKTKNQRKG 246
T+ +K PK+ + K+F+GGLS E +D+ +R+ F ++GT+ + VEM TK R G
Sbjct: 24 TVMSKSESPKEPEQLR-KLFMGGLSFETTDESLRSHFEQWGTLTDCVEMRDPNTKRSR-G 81
Query: 247 FCFIT 261
F F+T
Sbjct: 82 FGFVT 86
>UniRef50_UPI00004996C0 Cluster: RNA-binding protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: RNA-binding protein -
Entamoeba histolytica HM-1:IMSS
Length = 136
Score = 48.8 bits (111), Expect = 4e-05
Identities = 18/81 (22%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL-K 297
++++G L+ ++D+ ++ F +FGT+ + ++ D+ + KGF F+TFE ++ + +
Sbjct: 3 RLYIGSLAYSVTDESLKAAFEKFGTVTDCKVVTDRDSQRSKGFGFVTFEKDEDAKKAIEE 62
Query: 298 TPKRTIGGKEVDVKRATPKPD 360
++ + G+ + V + P+ +
Sbjct: 63 MNEQELEGRRIKVDVSRPREE 83
>UniRef50_Q3ED69 Cluster: Uncharacterized protein At1g22910.3; n=8;
Magnoliophyta|Rep: Uncharacterized protein At1g22910.3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 347
Score = 48.8 bits (111), Expect = 4e-05
Identities = 23/76 (30%), Positives = 37/76 (48%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+FVGGL+ E + ++ F +FG ILE + DK + KG+ F+TF +
Sbjct: 14 KVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAARSACVD 73
Query: 301 PKRTIGGKEVDVKRAT 348
I G+ + A+
Sbjct: 74 ATPVIDGRRANCNLAS 89
>UniRef50_Q5BW90 Cluster: SJCHGC05136 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05136 protein - Schistosoma
japonicum (Blood fluke)
Length = 184
Score = 48.8 bits (111), Expect = 4e-05
Identities = 24/75 (32%), Positives = 40/75 (53%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KIFVGGL +D+ +R FF +FG I E + D+ + +G+ F+T + ++
Sbjct: 13 KIFVGGLPYHTTDESLRCFFDQFGPIDEAVVITDRQTGKSRGYGFVTMSRTEDALLAIRD 72
Query: 301 PKRTIGGKEVDVKRA 345
P I G++ +V A
Sbjct: 73 PNPCIDGRKANVNLA 87
>UniRef50_Q23DH4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 261
Score = 48.8 bits (111), Expect = 4e-05
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 14/125 (11%)
Frame = +1
Query: 4 GFAFIVFKAPESIDKVMAAGEHTINN-----------KKVDPK---KAKARHGKIFVGGL 141
G+ +VF PE + + + +N KKV+ K KA IFV L
Sbjct: 66 GYCHLVFSTPEEAQEAIKLNKQVMNGRYLDISLAKGEKKVEYKNDVKAPEDCTTIFVKNL 125
Query: 142 SSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGG 321
+ + ++DE+ FF + G ++ V + ++ KGF FI F+ VN LK G
Sbjct: 126 AFDCTEDEVGEFFEKCGKVVNVRFVYHYSQKHFKGFAFIEFKMNSSVNAALKLNGTEFKG 185
Query: 322 KEVDV 336
+++ +
Sbjct: 186 RKLTI 190
Score = 46.0 bits (104), Expect = 3e-04
Identities = 19/74 (25%), Positives = 38/74 (51%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 303
+FV GL D I+ +F GTI +++P + + G+C + F + + + +K
Sbjct: 26 VFVSGLPYSADTDAIKEYFQNCGTIENIKLPRYQDTGKIIGYCHLVFSTPEEAQEAIKLN 85
Query: 304 KRTIGGKEVDVKRA 345
K+ + G+ +D+ A
Sbjct: 86 KQVMNGRYLDISLA 99
>UniRef50_Q5AJS6 Cluster: Multiple RNA-binding domain-containing
protein 1; n=4; Saccharomycetales|Rep: Multiple
RNA-binding domain-containing protein 1 - Candida
albicans (Yeast)
Length = 841
Score = 48.8 bits (111), Expect = 4e-05
Identities = 26/114 (22%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Frame = +1
Query: 34 ESIDKVMAAGEHTINNKKVDPKKAKARH----GKIFVGGLSSEISDDEIRNFFSEFGTIL 201
+ +++V + + N ++ P++ A+ G++F+ +S E S+++ R+ FS++G +
Sbjct: 278 KEVNEVTEVTQQSDNEPELTPEEQIAQKIEETGRLFIRNISYEASEEDFRSLFSQYGALE 337
Query: 202 EVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 360
EV + D + KGF ++ F + E K+ G+ + + A K D
Sbjct: 338 EVHIAIDTRTGKSKGFLYVQFLKKEDATRAYRSLDKQIFQGRLLHILPADKKKD 391
>UniRef50_UPI0000E45F83 Cluster: PREDICTED: similar to neurotrypsin;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to neurotrypsin - Strongylocentrotus purpuratus
Length = 516
Score = 48.4 bits (110), Expect = 5e-05
Identities = 26/82 (31%), Positives = 43/82 (52%)
Frame = +1
Query: 28 APESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEV 207
A ES++ + +N KK P++ +FV L +++ IR FSE GT+ +V
Sbjct: 36 AKESLNDQSVEFQMAMNPKKKKPERDNNDPRTVFVKNLGYNVTEKRIRKVFSECGTVRDV 95
Query: 208 EMPFDKTKNQRKGFCFITFESE 273
M + K + KG+C++ FE E
Sbjct: 96 RMVTNYQK-KFKGYCYVEFEDE 116
>UniRef50_UPI0000D578A0 Cluster: PREDICTED: similar to CG12870-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG12870-PA - Tribolium castaneum
Length = 423
Score = 48.4 bits (110), Expect = 5e-05
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Frame = +1
Query: 70 TIN-NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKG 246
T+N N KA H IFVG LS EI +R F+ FG I + + D + KG
Sbjct: 34 TVNQNSNTPSSNNKAEHHHIFVGDLSPEIETQTLREAFAAFGEISDCRVVRDPQTLKSKG 93
Query: 247 FCFITF----ESEQVVNDLLKTPKRTIGGKEVDVKRATPKP 357
+ F++F E+E +N + + +G + + AT KP
Sbjct: 94 YGFVSFIKKAEAESAINAM---NGQWLGSRSIRTNWATRKP 131
>UniRef50_UPI0000D567E5 Cluster: PREDICTED: similar to CG5422-PB,
isoform B; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG5422-PB, isoform B - Tribolium castaneum
Length = 364
Score = 48.4 bits (110), Expect = 5e-05
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +1
Query: 94 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ES 270
PK+ + H IFVG LS EI + +R F+ FG I + D + KG+ F++F +
Sbjct: 88 PKQDTSNHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
Query: 271 EQVVNDLLKTPKRTIGGKEVDVKRATPKP 357
+ N + + +G + + +T KP
Sbjct: 148 AEAENAIQAMNGQWLGSRSIRTNWSTRKP 176
Score = 33.9 bits (74), Expect = 1.1
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 303
++ GG ++ +++D ++ FS+FG I ++ + D KG+ FI F +++ ++T
Sbjct: 207 VYCGGFTTGLTEDLMQKTFSQFGVIQDIRVFKD------KGYAFIKFATKESATHAIETI 260
Query: 304 KRT-IGGKEV 330
T I G+ V
Sbjct: 261 HNTEINGQMV 270
>UniRef50_UPI000065CC4C Cluster: CUG triplet repeat, RNA binding
protein 2 isoform 1; n=5; Coelomata|Rep: CUG triplet
repeat, RNA binding protein 2 isoform 1 - Takifugu
rubripes
Length = 429
Score = 48.4 bits (110), Expect = 5e-05
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +1
Query: 46 KVMAAGEHTINNKKVDPKKAKA-RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFD 222
K ++ H I K D +K A K+F+G +S + ++EIR FS FG I E +
Sbjct: 77 KTLSGMHHPIQMKPADSEKTSAVEDRKLFIGMVSKKYGENEIRMMFSSFGQIEECRV-LR 135
Query: 223 KTKNQRKGFCFITFESEQVVNDLLKT 300
Q +G F+TF + + + +KT
Sbjct: 136 GPDGQSRGCAFVTFATRAMAQNAIKT 161
Score = 43.2 bits (97), Expect = 0.002
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKN--QRKGFCFITF 264
K+FVG + S+ E+R F FG + ++ + D+T N Q KG CF+TF
Sbjct: 11 KMFVGQIPRAWSETELRELFEPFGAVHQINILRDRTTNPPQSKGCCFVTF 60
>UniRef50_Q9SIX3 Cluster: Putative glycine-rich RNA-binding protein;
n=1; Arabidopsis thaliana|Rep: Putative glycine-rich
RNA-binding protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 185
Score = 48.4 bits (110), Expect = 5e-05
Identities = 24/76 (31%), Positives = 42/76 (55%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
+ FVGGL+ + I F+EFG + + ++ D+ + KGF F+TF+ E D ++T
Sbjct: 45 RCFVGGLAWATDEQSIERCFNEFGEVFDSKIIIDRETGRSKGFRFVTFKDE----DSMRT 100
Query: 301 PKRTIGGKEVDVKRAT 348
+ G+E+D + T
Sbjct: 101 AIDRMNGQELDGRNIT 116
>UniRef50_Q10KP0 Cluster: RNA recognition motif family protein,
expressed; n=9; Magnoliophyta|Rep: RNA recognition motif
family protein, expressed - Oryza sativa subsp. japonica
(Rice)
Length = 265
Score = 48.4 bits (110), Expect = 5e-05
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLK 297
+++VG LS + + + N FS G +LE ++ +D+ + +GF F+T+ S E+V N +
Sbjct: 181 RVYVGNLSWGVDNAALANLFSGEGEVLEAKVIYDRESGRSRGFGFVTYGSAEEVENAVSN 240
Query: 298 TPKRTIGGKEVDVKRATPKP 357
+ G+++ V A KP
Sbjct: 241 LDGADMDGRQIRVTVAESKP 260
Score = 41.1 bits (92), Expect = 0.007
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLK 297
++FVG L + ++ F + G++ VE+ +DK + +GF F+T S E+V + +
Sbjct: 87 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEAAVEQ 146
Query: 298 TPKRTIGGKEVDVKRATPKP 357
+ G+ + V P P
Sbjct: 147 FNGYILDGRSLRVNSGPPPP 166
>UniRef50_A2EV87 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 202
Score = 48.4 bits (110), Expect = 5e-05
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 4/121 (3%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHT-INNKKVD--PKKAKARHGKIFVGGLSSEISDDEIR 171
RGF F+ ++ + E I+ +K+ P K K + F+ L + +++ I+
Sbjct: 48 RGFGFVEYETEAGFKAAVDNKEPIEIDGRKIRVVPAKEKRKSKTAFLNRLPDQATEETIK 107
Query: 172 NFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKR-TIGGKEVDVKRAT 348
F ++ I + M +T QR FCFI FE+ +++ D+L ++ +GG + VK A
Sbjct: 108 AQFKDY-KITDFRMKTSRTTKQR--FCFIEFETPEMLTDILNNHRKFELGGATLIVKIAR 164
Query: 349 P 351
P
Sbjct: 165 P 165
>UniRef50_A0E382 Cluster: Chromosome undetermined scaffold_76, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_76,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 48.4 bits (110), Expect = 5e-05
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = +1
Query: 91 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 270
DP + +FVG L+ +D ++R F E+G I + + D T+++ +G+ FI +ES
Sbjct: 137 DPNITSEPYKTLFVGRLNYATTDKKLRKEFEEYGPIKSIRIIRDSTQDKPRGYAFIEYES 196
Query: 271 EQVVNDLLK--TPKRTIGGK-EVDVKR 342
+ V K KR G K VD++R
Sbjct: 197 KNSVKQAYKYAVDKRIDGRKLVVDIER 223
>UniRef50_Q9Y388 Cluster: RNA-binding motif protein, X-linked 2;
n=39; Coelomata|Rep: RNA-binding motif protein, X-linked
2 - Homo sapiens (Human)
Length = 322
Score = 48.4 bits (110), Expect = 5e-05
Identities = 19/51 (37%), Positives = 34/51 (66%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 276
IF+GGL E+++ +I FS++G I+ + + DK + KGFCF+ +E ++
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQR 88
>UniRef50_Q9H0Z9 Cluster: RNA-binding protein 38; n=16;
Eutheria|Rep: RNA-binding protein 38 - Homo sapiens
(Human)
Length = 216
Score = 48.4 bits (110), Expect = 5e-05
Identities = 24/75 (32%), Positives = 36/75 (48%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KIFVGGL +D +R +F FG I E + D+ + +G+ F+T K
Sbjct: 12 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71
Query: 301 PKRTIGGKEVDVKRA 345
P I G++ +V A
Sbjct: 72 PNPIIDGRKANVNLA 86
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 369,137,330
Number of Sequences: 1657284
Number of extensions: 6582789
Number of successful extensions: 21626
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 20469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21450
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16080341554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -