Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2179
(392 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 107 4e-24
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 107 4e-24
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 94 3e-20
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 94 3e-20
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 74 4e-14
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 74 4e-14
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 74 4e-14
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 73 6e-14
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 73 6e-14
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 62 1e-10
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 62 1e-10
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 62 1e-10
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 51 3e-07
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 50 8e-07
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 50 8e-07
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 49 1e-06
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 49 1e-06
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 48 2e-06
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 48 2e-06
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 47 4e-06
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 47 4e-06
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 47 4e-06
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 47 4e-06
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 47 4e-06
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 47 4e-06
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 47 6e-06
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 47 6e-06
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 47 6e-06
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 47 6e-06
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 46 7e-06
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 46 7e-06
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 45 2e-05
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 45 2e-05
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 44 4e-05
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 44 4e-05
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 44 4e-05
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 43 7e-05
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 43 7e-05
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 43 9e-05
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 42 2e-04
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 41 3e-04
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 40 5e-04
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 40 5e-04
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 40 5e-04
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 40 5e-04
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 40 6e-04
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 40 6e-04
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 40 6e-04
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 40 6e-04
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 40 6e-04
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 40 6e-04
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 40 6e-04
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 40 8e-04
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 39 0.001
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 39 0.001
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 39 0.001
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 37 0.006
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 37 0.006
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 36 0.008
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 36 0.010
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 36 0.010
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 36 0.010
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 36 0.010
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 35 0.018
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 35 0.018
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 35 0.024
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 35 0.024
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 35 0.024
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 35 0.024
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 35 0.024
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 35 0.024
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 35 0.024
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 35 0.024
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 35 0.024
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 34 0.042
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 33 0.073
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 33 0.073
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 33 0.073
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 33 0.096
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 33 0.096
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 33 0.096
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 32 0.13
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 32 0.13
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 31 0.22
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 31 0.29
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 31 0.29
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 30 0.51
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 30 0.51
L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical pr... 30 0.68
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 29 0.90
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 29 0.90
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 29 0.90
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 29 0.90
AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 29 1.6
Z49911-3|CAA90126.2| 735|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 27 6.3
U80842-8|AAB37951.1| 244|Caenorhabditis elegans Hypothetical pr... 27 6.3
U80840-12|AAB37925.1| 694|Caenorhabditis elegans Hypothetical p... 26 8.4
L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical p... 26 8.4
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 26 8.4
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 107 bits (256), Expect = 4e-24
Identities = 51/119 (42%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK-IFVGGLSSEISDDEIRNF 177
RGFAF+ F E +AA E TI K V+ K AK+R K +FVGGL S+ S+ ++R+
Sbjct: 70 RGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENKKVFVGGLPSDYSEQDLRSH 129
Query: 178 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 354
F +FG + ++E PFDK R+ F FI FE E+ + K+T G +E DVK+A P+
Sbjct: 130 FEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQ 188
Score = 63.3 bits (147), Expect = 6e-11
Identities = 25/75 (33%), Positives = 50/75 (66%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KIFVGG+S E++++++ + F+++G + + ++ +D+T + +GF F+ F + + L
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 301 PKRTIGGKEVDVKRA 345
++TI GK V+VK A
Sbjct: 90 REQTIKGKSVEVKPA 104
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 107 bits (256), Expect = 4e-24
Identities = 51/119 (42%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK-IFVGGLSSEISDDEIRNF 177
RGFAF+ F E +AA E TI K V+ K AK+R K +FVGGL S+ S+ ++R+
Sbjct: 70 RGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENKKVFVGGLPSDYSEQDLRSH 129
Query: 178 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 354
F +FG + ++E PFDK R+ F FI FE E+ + K+T G +E DVK+A P+
Sbjct: 130 FEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQ 188
Score = 63.3 bits (147), Expect = 6e-11
Identities = 25/75 (33%), Positives = 50/75 (66%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KIFVGG+S E++++++ + F+++G + + ++ +D+T + +GF F+ F + + L
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 301 PKRTIGGKEVDVKRA 345
++TI GK V+VK A
Sbjct: 90 REQTIKGKSVEVKPA 104
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 94.3 bits (224), Expect = 3e-20
Identities = 45/127 (35%), Positives = 75/127 (59%), Gaps = 9/127 (7%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK---------KAKARHGKIFVGGLSSEI 153
RGF FI F P S+DKV+ EH ++ KK+DPK K + K+F+GGLS+
Sbjct: 86 RGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATS 145
Query: 154 SDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVD 333
+ ++++ +F +G + + + FDK + +GF F+TF+S++V + + + I GK V+
Sbjct: 146 TLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVE 205
Query: 334 VKRATPK 354
K+A PK
Sbjct: 206 CKKAQPK 212
Score = 61.3 bits (142), Expect = 2e-10
Identities = 31/97 (31%), Positives = 50/97 (51%)
Frame = +1
Query: 64 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRK 243
E +N D GK+F+GGLS + + + +R++F FG + E + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 244 GFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 354
GF FITF V+ +L + + GK++D K A PK
Sbjct: 87 GFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 94.3 bits (224), Expect = 3e-20
Identities = 45/127 (35%), Positives = 75/127 (59%), Gaps = 9/127 (7%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK---------KAKARHGKIFVGGLSSEI 153
RGF FI F P S+DKV+ EH ++ KK+DPK K + K+F+GGLS+
Sbjct: 86 RGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATS 145
Query: 154 SDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVD 333
+ ++++ +F +G + + + FDK + +GF F+TF+S++V + + + I GK V+
Sbjct: 146 TLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVE 205
Query: 334 VKRATPK 354
K+A PK
Sbjct: 206 CKKAQPK 212
Score = 61.3 bits (142), Expect = 2e-10
Identities = 31/97 (31%), Positives = 50/97 (51%)
Frame = +1
Query: 64 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRK 243
E +N D GK+F+GGLS + + + +R++F FG + E + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 244 GFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 354
GF FITF V+ +L + + GK++D K A PK
Sbjct: 87 GFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 73.7 bits (173), Expect = 4e-14
Identities = 35/80 (43%), Positives = 50/80 (62%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KIFVGGL+S +DD +R F+S+FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 301 PKRTIGGKEVDVKRATPKPD 360
I GK VD KRA P+ D
Sbjct: 84 RPHIIDGKTVDPKRAVPRDD 103
Score = 73.3 bits (172), Expect = 6e-14
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 11/131 (8%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK-----------IFVGGLSS 147
RGF F+ F +D M H I+ K VDPK+A R K ++V G+
Sbjct: 64 RGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVRE 123
Query: 148 EISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKE 327
+ ++D + +F+++GT+ + E+ DK + +GF F+TF+ V+ + + G
Sbjct: 124 DHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHR 183
Query: 328 VDVKRATPKPD 360
DV++ K +
Sbjct: 184 CDVRKGLSKDE 194
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 73.7 bits (173), Expect = 4e-14
Identities = 35/80 (43%), Positives = 50/80 (62%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KIFVGGL+S +DD +R F+S+FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 301 PKRTIGGKEVDVKRATPKPD 360
I GK VD KRA P+ D
Sbjct: 84 RPHIIDGKTVDPKRAVPRDD 103
Score = 73.3 bits (172), Expect = 6e-14
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 11/131 (8%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK-----------IFVGGLSS 147
RGF F+ F +D M H I+ K VDPK+A R K ++V G+
Sbjct: 64 RGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVRE 123
Query: 148 EISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKE 327
+ ++D + +F+++GT+ + E+ DK + +GF F+TF+ V+ + + G
Sbjct: 124 DHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHR 183
Query: 328 VDVKRATPKPD 360
DV++ K +
Sbjct: 184 CDVRKGLSKDE 194
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 73.7 bits (173), Expect = 4e-14
Identities = 35/80 (43%), Positives = 50/80 (62%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KIFVGGL+S +DD +R F+S+FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 301 PKRTIGGKEVDVKRATPKPD 360
I GK VD KRA P+ D
Sbjct: 84 RPHIIDGKTVDPKRAVPRDD 103
Score = 73.3 bits (172), Expect = 6e-14
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 11/131 (8%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK-----------IFVGGLSS 147
RGF F+ F +D M H I+ K VDPK+A R K ++V G+
Sbjct: 64 RGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVRE 123
Query: 148 EISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKE 327
+ ++D + +F+++GT+ + E+ DK + +GF F+TF+ V+ + + G
Sbjct: 124 DHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHR 183
Query: 328 VDVKRATPKPD 360
DV++ K +
Sbjct: 184 CDVRKGLSKDE 194
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 73.3 bits (172), Expect = 6e-14
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 11/131 (8%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK-----------IFVGGLSS 147
RGF F+ F +D M H I+ K VDPK+A R K ++V G+
Sbjct: 26 RGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVRE 85
Query: 148 EISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKE 327
+ ++D + +F+++GT+ + E+ DK + +GF F+TF+ V+ + + G
Sbjct: 86 DHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHR 145
Query: 328 VDVKRATPKPD 360
DV++ K +
Sbjct: 146 CDVRKGLSKDE 156
Score = 54.0 bits (124), Expect = 4e-08
Identities = 25/65 (38%), Positives = 38/65 (58%)
Frame = +1
Query: 166 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 345
+R F+S+FG I ++ + D T + +GF F+TF + V+ +K I GK VD KRA
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 346 TPKPD 360
P+ D
Sbjct: 61 VPRDD 65
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 73.3 bits (172), Expect = 6e-14
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 11/131 (8%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK-----------IFVGGLSS 147
RGF F+ F +D M H I+ K VDPK+A R K ++V G+
Sbjct: 26 RGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVRE 85
Query: 148 EISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKE 327
+ ++D + +F+++GT+ + E+ DK + +GF F+TF+ V+ + + G
Sbjct: 86 DHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHR 145
Query: 328 VDVKRATPKPD 360
DV++ K +
Sbjct: 146 CDVRKGLSKDE 156
Score = 54.0 bits (124), Expect = 4e-08
Identities = 25/65 (38%), Positives = 38/65 (58%)
Frame = +1
Query: 166 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 345
+R F+S+FG I ++ + D T + +GF F+TF + V+ +K I GK VD KRA
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 346 TPKPD 360
P+ D
Sbjct: 61 VPRDD 65
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 62.5 bits (145), Expect = 1e-10
Identities = 27/78 (34%), Positives = 46/78 (58%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+F+GGLS + +D+++ N+FS++G +++ + D +GF F+TF S +
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 109
Query: 301 PKRTIGGKEVDVKRATPK 354
+GGK VD KRA P+
Sbjct: 110 RPHKLGGKTVDSKRAIPR 127
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 62.5 bits (145), Expect = 1e-10
Identities = 27/78 (34%), Positives = 46/78 (58%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+F+GGLS + +D+++ N+FS++G +++ + D +GF F+TF S +
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 129
Query: 301 PKRTIGGKEVDVKRATPK 354
+GGK VD KRA P+
Sbjct: 130 RPHKLGGKTVDSKRAIPR 147
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 62.5 bits (145), Expect = 1e-10
Identities = 27/78 (34%), Positives = 46/78 (58%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
K+F+GGLS + +D+++ N+FS++G +++ + D +GF F+TF S +
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 130
Query: 301 PKRTIGGKEVDVKRATPK 354
+GGK VD KRA P+
Sbjct: 131 RPHKLGGKTVDSKRAIPR 148
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 51.2 bits (117), Expect = 3e-07
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Frame = +1
Query: 13 FIVFKAPESIDKVMAAG-----EHTINNKKVDPKKAK-ARHGKIFVGGLSSEISDDEIRN 174
++ F A ES++K + +H I KV KK + + IFVG L EI++D +
Sbjct: 205 YVKFGAEESVEKALKYNGTKLDDHVIRVDKVGSKKKEFGKDMAIFVGNLPFEITEDALIT 264
Query: 175 FFS-EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVN 285
FFS + G + V + DK + KGF F+ F+ + V+
Sbjct: 265 FFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS 302
Score = 31.5 bits (68), Expect = 0.22
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEM 213
+FVG + +++ +R FS+FGTI V M
Sbjct: 145 VFVGNMPLTMNEKSVRRIFSDFGTISSVRM 174
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 49.6 bits (113), Expect = 8e-07
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +1
Query: 97 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESE 273
K +RH +FVG L SEI ++R F +FG + E ++ D N+ KG+ F+++ E
Sbjct: 125 KPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRRE 184
Query: 274 QVVNDLLKTPKRTIGGKEVDVKRATPKPD 360
+ + +G + + AT KPD
Sbjct: 185 DAERAIDEMNGAWLGRRTIRTNWATRKPD 213
Score = 34.7 bits (76), Expect = 0.024
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Frame = +1
Query: 67 HTINNKKVDP--KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR 240
H + K D +A A + ++VG +++ + +DEIR F FG I EV +
Sbjct: 237 HNQSEKTYDEIFNQAAADNTSVYVGNIAN-LGEDEIRRAFDRFGPINEVR------TFKI 289
Query: 241 KGFCFITFES-EQVVNDLLKTPKRTIGGKEV 330
+G+ F+ FE+ E +++ IGG+ V
Sbjct: 290 QGYAFVKFETKESAARAIVQMNNADIGGQIV 320
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 49.6 bits (113), Expect = 8e-07
Identities = 24/75 (32%), Positives = 37/75 (49%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
KIFVGGL SD + +F +FG I E + D+ + +G+ F+T + K
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 301 PKRTIGGKEVDVKRA 345
P I G++ +V A
Sbjct: 96 PNPIIDGRKANVNLA 110
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 48.8 bits (111), Expect = 1e-06
Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 9/126 (7%)
Frame = +1
Query: 4 GFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISD 159
G+A++ F+ P ++ M ++ K + DP ++ G IF+ L I +
Sbjct: 74 GYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDN 133
Query: 160 DEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVV-NDLLKTPKRTIGGKEVDV 336
I + FS FG IL ++ D+ KG+ F+ FE+E+ N + K + GK+V V
Sbjct: 134 KSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV 192
Query: 337 KRATPK 354
+ P+
Sbjct: 193 GKFQPR 198
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 48.8 bits (111), Expect = 1e-06
Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 9/126 (7%)
Frame = +1
Query: 4 GFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISD 159
G+A++ F+ P ++ M ++ K + DP ++ G IF+ L I +
Sbjct: 74 GYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDN 133
Query: 160 DEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVV-NDLLKTPKRTIGGKEVDV 336
I + FS FG IL ++ D+ KG+ F+ FE+E+ N + K + GK+V V
Sbjct: 134 KSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV 192
Query: 337 KRATPK 354
+ P+
Sbjct: 193 GKFQPR 198
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 48.0 bits (109), Expect = 2e-06
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 276
+FVG +S ++S+D IR+ FS+ G +L ++M D+ + KG+ FI F Q
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQ 70
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 48.0 bits (109), Expect = 2e-06
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 9/129 (6%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-------GKIFVGGLSSEISD 159
+GF F+ + +KV+A +H I+ ++ D K R +IFVG L+ ++ +
Sbjct: 213 KGFGFVRMSSVGEQNKVLAIPQHMIDGRRCDVKVPDGRDKQGRPSISRIFVGRLTDKVDE 272
Query: 160 DEIRNFFS-EFGTILEVEMPFDK-TKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVD 333
++R F E + +E + D +GF F+T S + ++ T+ G V
Sbjct: 273 HQLRKVFGDEAKSYIETAVVTDVFIPKPFRGFAFVTLSSAEAAERIVSKGSLTVNGLSVG 332
Query: 334 VKRATPKPD 360
+ A P+ +
Sbjct: 333 LSIAQPREE 341
Score = 39.9 bits (89), Expect = 6e-04
Identities = 21/72 (29%), Positives = 37/72 (51%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 303
+ V G+ + +D+ + +F + GT++ E+ K+ KGF F+ S N +L P
Sbjct: 175 LIVLGVDFKTTDECFQKYFEDIGTVVFCEIK-RKSDGNSKGFGFVRMSSVGEQNKVLAIP 233
Query: 304 KRTIGGKEVDVK 339
+ I G+ DVK
Sbjct: 234 QHMIDGRRCDVK 245
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 47.2 bits (107), Expect = 4e-06
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK- 297
+IFVGG + ++ E+R F +F + +V+M Q KG+ FITFE+E ++ K
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 125
Query: 298 TPKR 309
TPK+
Sbjct: 126 TPKQ 129
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 47.2 bits (107), Expect = 4e-06
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +1
Query: 112 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVND 288
RH +FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ + E+
Sbjct: 20 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 79
Query: 289 LLKTPKRTIGGKEVDVKRATPKP 357
+ + + +G + + AT KP
Sbjct: 80 IEQMNGQWLGRRTIRTNWATRKP 102
Score = 33.9 bits (74), Expect = 0.042
Identities = 19/70 (27%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 300
++VG ++S +++DEIR F+ FG I EV + + +G+ F+ F++ + +++
Sbjct: 130 VYVGNIAS-LTEDEIRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQM 182
Query: 301 PKRTIGGKEV 330
+ +GG+ V
Sbjct: 183 NNQDVGGQLV 192
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 47.2 bits (107), Expect = 4e-06
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +1
Query: 112 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVND 288
RH +FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ + E+
Sbjct: 30 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 89
Query: 289 LLKTPKRTIGGKEVDVKRATPKP 357
+ + + +G + + AT KP
Sbjct: 90 IEQMNGQWLGRRTIRTNWATRKP 112
Score = 33.9 bits (74), Expect = 0.042
Identities = 19/70 (27%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 300
++VG ++S +++DEIR F+ FG I EV + + +G+ F+ F++ + +++
Sbjct: 140 VYVGNIAS-LTEDEIRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQM 192
Query: 301 PKRTIGGKEV 330
+ +GG+ V
Sbjct: 193 NNQDVGGQLV 202
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 47.2 bits (107), Expect = 4e-06
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +1
Query: 112 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVND 288
RH +FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ + E+
Sbjct: 133 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 192
Query: 289 LLKTPKRTIGGKEVDVKRATPKP 357
+ + + +G + + AT KP
Sbjct: 193 IEQMNGQWLGRRTIRTNWATRKP 215
Score = 33.9 bits (74), Expect = 0.042
Identities = 19/70 (27%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 300
++VG ++S +++DEIR F+ FG I EV + + +G+ F+ F++ + +++
Sbjct: 243 VYVGNIAS-LTEDEIRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQM 295
Query: 301 PKRTIGGKEV 330
+ +GG+ V
Sbjct: 296 NNQDVGGQLV 305
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 47.2 bits (107), Expect = 4e-06
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +1
Query: 112 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVND 288
RH +FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ + E+
Sbjct: 101 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 160
Query: 289 LLKTPKRTIGGKEVDVKRATPKP 357
+ + + +G + + AT KP
Sbjct: 161 IEQMNGQWLGRRTIRTNWATRKP 183
Score = 33.9 bits (74), Expect = 0.042
Identities = 19/70 (27%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 300
++VG ++S +++DEIR F+ FG I EV + + +G+ F+ F++ + +++
Sbjct: 211 VYVGNIAS-LTEDEIRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQM 263
Query: 301 PKRTIGGKEV 330
+ +GG+ V
Sbjct: 264 NNQDVGGQLV 273
Score = 31.9 bits (69), Expect = 0.17
Identities = 11/36 (30%), Positives = 24/36 (66%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK 231
++VG L S +++D I F++ G++ + ++ FD+ K
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDEMK 83
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 47.2 bits (107), Expect = 4e-06
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK- 297
+IFVGG + ++ E+R F +F + +V+M Q KG+ FITFE+E ++ K
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 126
Query: 298 TPKR 309
TPK+
Sbjct: 127 TPKQ 130
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 46.8 bits (106), Expect = 6e-06
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1
Query: 115 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 294
H +F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 377
Query: 295 K 297
+
Sbjct: 378 E 378
Score = 37.5 bits (83), Expect = 0.003
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Frame = +1
Query: 67 HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR-- 240
HT+ + + K+FVGG+S ++ I FF +FGT+ V+ P + N R
Sbjct: 188 HTVVKNHRNENNQRVVSNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGK 246
Query: 241 ------KGFCFITFESEQVVNDLLKTPKR 309
+ F+ + EQ V L+ R
Sbjct: 247 SIAIGSYSYLFLVYSDEQSVIKLMSACHR 275
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 46.8 bits (106), Expect = 6e-06
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1
Query: 115 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 294
H +F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 377
Query: 295 K 297
+
Sbjct: 378 E 378
Score = 37.5 bits (83), Expect = 0.003
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Frame = +1
Query: 67 HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR-- 240
HT+ + + K+FVGG+S ++ I FF +FGT+ V+ P + N R
Sbjct: 188 HTVVKNHRNENNQRVVSNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGK 246
Query: 241 ------KGFCFITFESEQVVNDLLKTPKR 309
+ F+ + EQ V L+ R
Sbjct: 247 SIAIGSYSYLFLVYSDEQSVIKLMSACHR 275
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 46.8 bits (106), Expect = 6e-06
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1
Query: 115 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 294
H +F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L
Sbjct: 104 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 163
Query: 295 K 297
+
Sbjct: 164 E 164
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 46.8 bits (106), Expect = 6e-06
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1
Query: 115 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 294
H +F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 377
Query: 295 K 297
+
Sbjct: 378 E 378
Score = 37.5 bits (83), Expect = 0.003
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Frame = +1
Query: 67 HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR-- 240
HT+ + + K+FVGG+S ++ I FF +FGT+ V+ P + N R
Sbjct: 188 HTVVKNHRNENNQRVVSNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGK 246
Query: 241 ------KGFCFITFESEQVVNDLLKTPKR 309
+ F+ + EQ V L+ R
Sbjct: 247 SIAIGSYSYLFLVYSDEQSVIKLMSACHR 275
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 46.4 bits (105), Expect = 7e-06
Identities = 18/70 (25%), Positives = 44/70 (62%)
Frame = +1
Query: 67 HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKG 246
H+ + ++ + ++H +FVG LS ++S++ +++ F++FG + E ++ D + KG
Sbjct: 118 HSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKG 177
Query: 247 FCFITFESEQ 276
+ F++F ++Q
Sbjct: 178 YGFVSFPNKQ 187
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 46.4 bits (105), Expect = 7e-06
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +1
Query: 91 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 270
DP ++ G IF+ L I + I + FS FG IL ++ D+ KG+ F+ FE+
Sbjct: 48 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFET 106
Query: 271 EQVV-NDLLKTPKRTIGGKEVDVKRATPK 354
E+ N + K + GK+V V + P+
Sbjct: 107 EEAAQNAIQKVNGMLLAGKKVFVGKFQPR 135
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 45.2 bits (102), Expect = 2e-05
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 300
++V + +++DD +R+ FS FGTI ++ D+ + KGF F+ FE E+ +
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATAAVTDM 403
Query: 301 PKRTIGGKEVDVKRATPKPD 360
+ IG K + V A K D
Sbjct: 404 NSKMIGAKPLYVALAQRKED 423
Score = 44.4 bits (100), Expect = 3e-05
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 15/122 (12%)
Frame = +1
Query: 4 GFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISD 159
G+A++ F+ P ++ + I+ + + DP +A +G IF+ L I +
Sbjct: 99 GYAYVNFQQPADAERALDTMNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDN 158
Query: 160 DEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE-------QVVNDLLKTPKRTIG 318
+ + FS FG IL ++ D N KG+ F+ FE+E + VN +L + K+
Sbjct: 159 KSVYDTFSLFGNILSCKVATDDEGNS-KGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYV 217
Query: 319 GK 324
GK
Sbjct: 218 GK 219
Score = 29.5 bits (63), Expect = 0.90
Identities = 13/62 (20%), Positives = 28/62 (45%)
Frame = +1
Query: 112 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 291
++ +FV + +++ FS+FG I + D + + KGF F+ F +
Sbjct: 236 KYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQDAAGQA 294
Query: 292 LK 297
++
Sbjct: 295 VE 296
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 45.2 bits (102), Expect = 2e-05
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 300
++V + +++DD +R+ FS FGTI ++ D+ + KGF F+ FE E+ +
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATAAVTDM 403
Query: 301 PKRTIGGKEVDVKRATPKPD 360
+ IG K + V A K D
Sbjct: 404 NSKMIGAKPLYVALAQRKED 423
Score = 44.4 bits (100), Expect = 3e-05
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 15/122 (12%)
Frame = +1
Query: 4 GFAFIVFKAPESIDKVM-AAGEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISD 159
G+A++ F+ P ++ + I+ + + DP +A +G IF+ L I +
Sbjct: 99 GYAYVNFQQPADAERALDTMNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDN 158
Query: 160 DEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE-------QVVNDLLKTPKRTIG 318
+ + FS FG IL ++ D N KG+ F+ FE+E + VN +L + K+
Sbjct: 159 KSVYDTFSLFGNILSCKVATDDEGNS-KGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYV 217
Query: 319 GK 324
GK
Sbjct: 218 GK 219
Score = 29.5 bits (63), Expect = 0.90
Identities = 13/62 (20%), Positives = 28/62 (45%)
Frame = +1
Query: 112 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 291
++ +FV + +++ FS+FG I + D + + KGF F+ F +
Sbjct: 236 KYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQDAAGQA 294
Query: 292 LK 297
++
Sbjct: 295 VE 296
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 44.0 bits (99), Expect = 4e-05
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +1
Query: 130 VGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 270
V L E+++DE+R+ F + G ++ + + DK KGF F+TFES
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFES 226
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 44.0 bits (99), Expect = 4e-05
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 8/107 (7%)
Frame = +1
Query: 1 RGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH------GKIFVGGLSSEISD 159
+GF F+ F E D + + K + KA A IFVG L E+ +
Sbjct: 54 QGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDE 113
Query: 160 DEIRNFFSEFGTILEV-EMPFDKTKNQRKGFCFITFESEQVVNDLLK 297
+ + FS FG IL+V ++ D KGF FI F S + + L+
Sbjct: 114 KLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALE 160
Score = 41.5 bits (93), Expect = 2e-04
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 303
I+VGGL ++S+ + + G ++ V MP D+ +GF F+ F E+ + +K
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 304 KR-TIGGKEVDVKRAT 348
+ GK + V +A+
Sbjct: 75 NMIKLYGKPIKVNKAS 90
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 44.0 bits (99), Expect = 4e-05
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 8/107 (7%)
Frame = +1
Query: 1 RGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH------GKIFVGGLSSEISD 159
+GF F+ F E D + + K + KA A IFVG L E+ +
Sbjct: 64 QGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDE 123
Query: 160 DEIRNFFSEFGTILEV-EMPFDKTKNQRKGFCFITFESEQVVNDLLK 297
+ + FS FG IL+V ++ D KGF FI F S + + L+
Sbjct: 124 KLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALE 170
Score = 41.5 bits (93), Expect = 2e-04
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 303
I+VGGL ++S+ + + G ++ V MP D+ +GF F+ F E+ + +K
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 304 KR-TIGGKEVDVKRAT 348
+ GK + V +A+
Sbjct: 85 NMIKLYGKPIKVNKAS 100
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 43.2 bits (97), Expect = 7e-05
Identities = 23/94 (24%), Positives = 42/94 (44%)
Frame = +1
Query: 70 TINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGF 249
T N K+ + K +++ + ++ ++F +G+I V M +D +GF
Sbjct: 9 TTNISKLIEARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGF 68
Query: 250 CFITFESEQVVNDLLKTPKRTIGGKEVDVKRATP 351
ITF+S+ N ++ I G VDV+ P
Sbjct: 69 ASITFDSKDGANKAIEQRPHVIDGDRVDVEPYIP 102
Score = 26.2 bits (55), Expect = 8.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVD 93
RGFA I F + + +K + H I+ +VD
Sbjct: 66 RGFASITFDSKDGANKAIEQRPHVIDGDRVD 96
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 43.2 bits (97), Expect = 7e-05
Identities = 15/51 (29%), Positives = 33/51 (64%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 276
I++GGLS +S+ ++ FS++G ++ + + DK + KGF F+ ++ ++
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQR 90
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 42.7 bits (96), Expect = 9e-05
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 13/130 (10%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKV-----DPKK-------AKARHGKIFVGGLS 144
RGFA++V + + + + + + + DP+K K+FV +
Sbjct: 632 RGFAYVVMENDQKAQQALLKDRVPVKGRPMFISANDPEKRVGFKFSTTLEKSKVFVRNVH 691
Query: 145 SEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT-PKRTIGG 321
+ +DDE++ FS+FGT+ V K + KG F+ F++E + + K +
Sbjct: 692 FQATDDELKALFSKFGTVTSVRRVTHK-DGKPKGIAFVDFDTEASAQKCVASGDKLMLRE 750
Query: 322 KEVDVKRATP 351
+E++V + P
Sbjct: 751 RELEVALSNP 760
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 41.5 bits (93), Expect = 2e-04
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 276
+++ GL +DD +R S++G I + DK N KG+ F+ FES Q
Sbjct: 109 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 159
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 41.5 bits (93), Expect = 2e-04
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 276
+++ GL +DD +R S++G I + DK N KG+ F+ FES Q
Sbjct: 83 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 133
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 41.5 bits (93), Expect = 2e-04
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 303
+FV + E ++D++ + FSE+G I + + D+ KG+ + +E+++ N+ +
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 304 KRT-IGGKEVDV 336
T + G+ V V
Sbjct: 117 NDTDLLGQNVKV 128
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 41.1 bits (92), Expect = 3e-04
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 300
+FV LSS+ D + FS+FG I+ V++ D T+ Q KG+ F++ + + N +L
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQ-QCKGYAFVSMSNYTEAYNAMLSL 434
Query: 301 PKRTIGGKEVDV--KRATP 351
+ GK + V K +TP
Sbjct: 435 NGTNLAGKTLQVVFKSSTP 453
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 40.3 bits (90), Expect = 5e-04
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 273
++VG + +++E+ NFFS G I V + D+ + +GF FI F E
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEE 56
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 40.3 bits (90), Expect = 5e-04
Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +1
Query: 97 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 276
+KA+A ++VG + + +EI F G++ V + D+ KGF ++ F ++
Sbjct: 71 EKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKE 130
Query: 277 VVNDLLKTPKRTIGGKEVDV-KRATPKP 357
+ + L + G+++ V + T KP
Sbjct: 131 GMQNALAMTDSLLRGRQIKVDPKRTNKP 158
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 40.3 bits (90), Expect = 5e-04
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 112 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE-SEQVVND 288
R ++VGG + ++++ + F FG ++ + +P D + +GF F+ F+ +E
Sbjct: 9 RKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMA 68
Query: 289 LLKTPKRTIGGKEVDVKRATP 351
+ + + GK + V A P
Sbjct: 69 IDNMNESELFGKTIRVNFARP 89
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 40.3 bits (90), Expect = 5e-04
Identities = 17/79 (21%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLK 297
++F G L +E+SD+ + F ++ + + ++ + N+ KG+ F++F +SE V + +
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMRE 263
Query: 298 TPKRTIGGKEVDVKRATPK 354
+ +G + + ++++ K
Sbjct: 264 MDGKYVGNRPIKLRKSAWK 282
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 39.9 bits (89), Expect = 6e-04
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +1
Query: 76 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 255
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 256 ITF 264
+TF
Sbjct: 101 VTF 103
Score = 39.9 bits (89), Expect = 6e-04
Identities = 22/73 (30%), Positives = 38/73 (52%)
Frame = +1
Query: 46 KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 225
KV+ H + K D + R K+F+G LS + +++ +R F++FG I + + D+
Sbjct: 120 KVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ 177
Query: 226 TKNQRKGFCFITF 264
R G F+TF
Sbjct: 178 DGKSR-GCAFVTF 189
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 39.9 bits (89), Expect = 6e-04
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +1
Query: 76 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 255
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 256 ITF 264
+TF
Sbjct: 101 VTF 103
Score = 39.9 bits (89), Expect = 6e-04
Identities = 22/73 (30%), Positives = 38/73 (52%)
Frame = +1
Query: 46 KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 225
KV+ H + K D + R K+F+G LS + +++ +R F++FG I + + D+
Sbjct: 120 KVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ 177
Query: 226 TKNQRKGFCFITF 264
R G F+TF
Sbjct: 178 DGKSR-GCAFVTF 189
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 39.9 bits (89), Expect = 6e-04
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +1
Query: 76 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 255
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 256 ITF 264
+TF
Sbjct: 101 VTF 103
Score = 39.9 bits (89), Expect = 6e-04
Identities = 22/73 (30%), Positives = 38/73 (52%)
Frame = +1
Query: 46 KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 225
KV+ H + K D + R K+F+G LS + +++ +R F++FG I + + D+
Sbjct: 120 KVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ 177
Query: 226 TKNQRKGFCFITF 264
R G F+TF
Sbjct: 178 DGKSR-GCAFVTF 189
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 39.9 bits (89), Expect = 6e-04
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +1
Query: 76 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 255
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 256 ITF 264
+TF
Sbjct: 101 VTF 103
Score = 39.9 bits (89), Expect = 6e-04
Identities = 22/73 (30%), Positives = 38/73 (52%)
Frame = +1
Query: 46 KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 225
KV+ H + K D + R K+F+G LS + +++ +R F++FG I + + D+
Sbjct: 120 KVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ 177
Query: 226 TKNQRKGFCFITF 264
R G F+TF
Sbjct: 178 DGKSR-GCAFVTF 189
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 39.9 bits (89), Expect = 6e-04
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +1
Query: 76 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 255
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 256 ITF 264
+TF
Sbjct: 101 VTF 103
Score = 39.9 bits (89), Expect = 6e-04
Identities = 22/73 (30%), Positives = 38/73 (52%)
Frame = +1
Query: 46 KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 225
KV+ H + K D + R K+F+G LS + +++ +R F++FG I + + D+
Sbjct: 120 KVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ 177
Query: 226 TKNQRKGFCFITF 264
R G F+TF
Sbjct: 178 DGKSR-GCAFVTF 189
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 39.9 bits (89), Expect = 6e-04
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +1
Query: 76 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 255
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 256 ITF 264
+TF
Sbjct: 101 VTF 103
Score = 34.7 bits (76), Expect = 0.024
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +1
Query: 46 KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 225
KV+ H + K D + R K+F+G LS + +++ +R F++FG I + + D+
Sbjct: 120 KVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ 177
Query: 226 TKNQR 240
R
Sbjct: 178 DGKSR 182
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 39.9 bits (89), Expect = 6e-04
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +1
Query: 76 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 255
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 256 ITF 264
+TF
Sbjct: 101 VTF 103
Score = 39.9 bits (89), Expect = 6e-04
Identities = 22/73 (30%), Positives = 38/73 (52%)
Frame = +1
Query: 46 KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 225
KV+ H + K D + R K+F+G LS + +++ +R F++FG I + + D+
Sbjct: 120 KVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ 177
Query: 226 TKNQRKGFCFITF 264
R G F+TF
Sbjct: 178 DGKSR-GCAFVTF 189
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 39.5 bits (88), Expect = 8e-04
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 273
++VG + ++D++ N+FS+ G + V + D+ + +GF F+ F E
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEE 55
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 39.1 bits (87), Expect = 0.001
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 264
K+FVG + + + ++R+ F +FG I E + DK KG F+T+
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
Score = 36.3 bits (80), Expect = 0.008
Identities = 22/81 (27%), Positives = 39/81 (48%)
Frame = +1
Query: 25 KAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 204
K +++ M +++ PK K K+F+G LS + S+DE+R F+ FG + E
Sbjct: 94 KTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFATFGELDE 152
Query: 205 VEMPFDKTKNQRKGFCFITFE 267
V + KG F+ ++
Sbjct: 153 VTV-LRGADGASKGCAFVKYK 172
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 39.1 bits (87), Expect = 0.001
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 264
K+FVG + + + ++R+ F +FG I E + DK KG F+T+
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
Score = 36.3 bits (80), Expect = 0.008
Identities = 22/81 (27%), Positives = 39/81 (48%)
Frame = +1
Query: 25 KAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 204
K +++ M +++ PK K K+F+G LS + S+DE+R F+ FG + E
Sbjct: 94 KTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEVRALFATFGELDE 152
Query: 205 VEMPFDKTKNQRKGFCFITFE 267
V + KG F+ ++
Sbjct: 153 VTV-LRGADGASKGCAFVKYK 172
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 38.7 bits (86), Expect = 0.001
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 273
++VG + + +++EI N+F+ G + V + +D+ + +GF F+ F E
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEE 57
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 36.7 bits (81), Expect = 0.006
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 276
++VG LS +D++ F G + V M D+ K GFCF+ + + +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTRE 89
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 36.7 bits (81), Expect = 0.006
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF-DKTKNQRKGFCFITFESEQVVNDLL 294
+++VGG S+ +S ++IRN ++ EV + + + +GF F+ S N LL
Sbjct: 10 RLYVGGFSTNLSSEQIRNLITQLAAPFEVSIDIVENGSRKHRGFAFVQCRSLAEANVLL 68
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 36.3 bits (80), Expect = 0.008
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 130 VGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 264
V LSS ++ ++R+ F EFG I + ++ +D+ +GF FI F
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 35.9 bits (79), Expect = 0.010
Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
+I++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 301 PK-RTIGGKEVDVKRATPK 354
+ +GG+ V + + P+
Sbjct: 56 LNGKELGGERVILDYSKPR 74
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 35.9 bits (79), Expect = 0.010
Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
+I++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 301 PK-RTIGGKEVDVKRATPK 354
+ +GG+ V + + P+
Sbjct: 56 LNGKELGGERVILDYSKPR 74
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 35.9 bits (79), Expect = 0.010
Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
+I++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 301 PK-RTIGGKEVDVKRATPK 354
+ +GG+ V + + P+
Sbjct: 56 LNGKELGGERVILDYSKPR 74
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 35.9 bits (79), Expect = 0.010
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMP 216
K+FVGGL S + + +I NFFS +G L+V+ P
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGR-LQVDWP 119
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 35.1 bits (77), Expect = 0.018
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +1
Query: 94 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 273
PKK ++FVG L +E+ + E++ FS G I E + KGF F+ ++
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTR 160
Query: 274 QVVNDLLKT-PKRTIGGKEVDVKRA 345
+ R I G++V V+ A
Sbjct: 161 AHAESAKEAIDGRIIHGRQVRVRFA 185
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 35.1 bits (77), Expect = 0.018
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +1
Query: 94 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 273
PKK ++FVG L +E+ + E++ FS G I E + KGF F+ ++
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTR 160
Query: 274 QVVNDLLKT-PKRTIGGKEVDVKRA 345
+ R I G++V V+ A
Sbjct: 161 AHAESAKEAIDGRIIHGRQVRVRFA 185
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 34.7 bits (76), Expect = 0.024
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 264
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 34.7 bits (76), Expect = 0.024
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLK 297
+FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++ +Q + +
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAE 227
Query: 298 TPKRTI--GGKEVDV 336
R I GG + +
Sbjct: 228 EQDRPIRAGGSRMKI 242
Score = 27.9 bits (59), Expect = 2.7
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +1
Query: 7 FAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK------IFVGGLSSEISDDEI 168
+AF++F+ + + A E + + K +GK +FVGGL S + +
Sbjct: 210 YAFVMFQTVDQA--IQAKAEEQDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEIL 267
Query: 169 RNFFSEFGTILEVE 210
+ F EFG + ++
Sbjct: 268 QKAFGEFGFVENID 281
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 34.7 bits (76), Expect = 0.024
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLK 297
+FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++ +Q + +
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAE 227
Query: 298 TPKRTI--GGKEVDV 336
R I GG + +
Sbjct: 228 EQDRPIRAGGSRMKI 242
Score = 27.9 bits (59), Expect = 2.7
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +1
Query: 7 FAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK------IFVGGLSSEISDDEI 168
+AF++F+ + + A E + + K +GK +FVGGL S + +
Sbjct: 210 YAFVMFQTVDQA--IQAKAEEQDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEIL 267
Query: 169 RNFFSEFGTILEVE 210
+ F EFG + ++
Sbjct: 268 QKAFGEFGFVENID 281
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 34.7 bits (76), Expect = 0.024
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLK 297
+FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++ +Q + +
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAE 204
Query: 298 TPKRTI--GGKEVDV 336
R I GG + +
Sbjct: 205 EQDRPIRAGGSRMKI 219
Score = 27.9 bits (59), Expect = 2.7
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +1
Query: 7 FAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK------IFVGGLSSEISDDEI 168
+AF++F+ + + A E + + K +GK +FVGGL S + +
Sbjct: 187 YAFVMFQTVDQA--IQAKAEEQDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEIL 244
Query: 169 RNFFSEFGTILEVE 210
+ F EFG + ++
Sbjct: 245 QKAFGEFGFVENID 258
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 34.7 bits (76), Expect = 0.024
Identities = 21/74 (28%), Positives = 38/74 (51%)
Frame = +1
Query: 136 GLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTI 315
GL E ++ E+R+FF G I +E+P + + G + F +E+ N+ LK + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIP--RRNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 316 GGKEVDVKRATPKP 357
G + ++V A P
Sbjct: 68 GSRYIEVFPAGGAP 81
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 34.7 bits (76), Expect = 0.024
Identities = 21/74 (28%), Positives = 38/74 (51%)
Frame = +1
Query: 136 GLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTI 315
GL E ++ E+R+FF G I +E+P + + G + F +E+ N+ LK + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIP--RRNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 316 GGKEVDVKRATPKP 357
G + ++V A P
Sbjct: 68 GSRYIEVFPAGGAP 81
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 34.7 bits (76), Expect = 0.024
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 264
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 34.7 bits (76), Expect = 0.024
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 264
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 313
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 34.7 bits (76), Expect = 0.024
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 264
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 316
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 33.9 bits (74), Expect = 0.042
Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 5/102 (4%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGE-HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNF 177
RG+AF+ + E + H I+ K + ++F+G + S DEI
Sbjct: 241 RGYAFVTYCNKEDAAAAAKTYDGHEISTGKPLKVNVSIANTRLFIGNIPKTKSKDEILEE 300
Query: 178 FSEFGT----ILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 291
++ +P D K + +GFCF+ F + +D+
Sbjct: 301 LKTHAEGVVDVIVYSVP-DNEKIKNRGFCFVDFIDHKTASDI 341
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 33.1 bits (72), Expect = 0.073
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 297
K++VGGL S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 33.1 bits (72), Expect = 0.073
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 297
K++VGGL S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 33.1 bits (72), Expect = 0.073
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 297
K++VGGL S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 32.7 bits (71), Expect = 0.096
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +1
Query: 61 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE-VEMPFDKTKNQ 237
G+HT + + K +FVG +S + SD+ IR +E G + + K Q
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 238 RKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVK 339
GFC T + E + L + +G K++ VK
Sbjct: 88 GFGFCHFT-DLEGTLRALRILHEFHLGDKKLTVK 120
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 32.7 bits (71), Expect = 0.096
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +1
Query: 61 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE-VEMPFDKTKNQ 237
G+HT + + K +FVG +S + SD+ IR +E G + + K Q
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 238 RKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVK 339
GFC T + E + L + +G K++ VK
Sbjct: 88 GFGFCHFT-DLEGTLRALRILHEFHLGDKKLTVK 120
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 32.7 bits (71), Expect = 0.096
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 94 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 204
PKK ++FVG L +E+ + E++ FS G I E
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAE 144
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 32.3 bits (70), Expect = 0.13
Identities = 17/88 (19%), Positives = 39/88 (44%)
Frame = +1
Query: 79 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFI 258
N K++ + + + ++ + ++ FFS G + +V + D + KG C++
Sbjct: 12 NAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYV 71
Query: 259 TFESEQVVNDLLKTPKRTIGGKEVDVKR 342
F E+ V L + + G + ++R
Sbjct: 72 EFWDEESVPLGLALNGQRLMGAPLQIQR 99
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 32.3 bits (70), Expect = 0.13
Identities = 17/88 (19%), Positives = 39/88 (44%)
Frame = +1
Query: 79 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFI 258
N K++ + + + ++ + ++ FFS G + +V + D + KG C++
Sbjct: 157 NAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYV 216
Query: 259 TFESEQVVNDLLKTPKRTIGGKEVDVKR 342
F E+ V L + + G + ++R
Sbjct: 217 EFWDEESVPLGLALNGQRLMGAPLQIQR 244
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 31.5 bits (68), Expect = 0.22
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRN------FFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVV 282
K F+GGL + +I F E ++ + D+ KGF ++TFE+EQ +
Sbjct: 7 KAFIGGLPYDSIATDIETILKHCKFTDEELKKFDIHLVHDRDSGSFKGFAYVTFENEQQM 66
Query: 283 NDLLK-TPKRTIGGKEVDVKRA 345
N + G + + V RA
Sbjct: 67 NTAISGLNGADFGNRVLKVNRA 88
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 31.1 bits (67), Expect = 0.29
Identities = 17/70 (24%), Positives = 37/70 (52%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 300
++++G L + SD ++ +FF +G + +V M + GF F+ F+ ++ +D +
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQRDADDAV-- 52
Query: 301 PKRTIGGKEV 330
+ GKE+
Sbjct: 53 --HDLNGKEL 60
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 31.1 bits (67), Expect = 0.29
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 49 VMAAGEHTINNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTIL 201
+M + + K P A+ + K+F+GGL ++S++++ F FG +L
Sbjct: 221 LMGVSKSCLEASKKRPISAEPLYSRKVFIGGLPIDVSEEQVWATFGAFGKVL 272
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 30.3 bits (65), Expect = 0.51
Identities = 9/41 (21%), Positives = 24/41 (58%)
Frame = +1
Query: 157 DDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQV 279
+ E+ +F +FG +L + + ++ KG+ ++ F+++ V
Sbjct: 45 EKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAV 85
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 30.3 bits (65), Expect = 0.51
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 225
++VG L S +++D I F++ G++ + ++ FD+
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical
protein R05D3.2 protein.
Length = 737
Score = 29.9 bits (64), Expect = 0.68
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -1
Query: 308 LLGVLSKSFTTCSDSNVMKQKPFLWFFVLSKGISTSKI 195
L+G L S+ ++ PF +FF+ S+G STSKI
Sbjct: 156 LIGALWNYVFVLSNVSLFVLLPFSYFFIESQGFSTSKI 193
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 29.5 bits (63), Expect = 0.90
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 270
+FV L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 29.5 bits (63), Expect = 0.90
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 270
+FV L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 29.5 bits (63), Expect = 0.90
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 270
+FV L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 222
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 29.5 bits (63), Expect = 0.90
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMP 216
KIFVGG+ +I++ +++ F EFG+ VE P
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFGS-CAVEWP 326
>AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 28.7 bits (61), Expect = 1.6
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 106 KARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR-KGFCFITFESEQ 276
K +H +++ G S++ D+I + ++FG V M K ++ KG FIT+++ +
Sbjct: 106 KIKHRTVYMKGFSTDTQLDDIIQWANQFGETENVLMRRLKPGDRTFKGSVFITYKTRE 163
>Z49911-3|CAA90126.2| 735|Caenorhabditis elegans Hypothetical
protein M28.4 protein.
Length = 735
Score = 27.1 bits (57), Expect = 4.8
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = -3
Query: 303 GSLKQIIYNLLRFKCDETEALSLVLCFVKGHLHF*D-SSKFT 181
GSLK I +L+ ++ + TEALS + GH HF +SKFT
Sbjct: 338 GSLKTINTSLIAYQQEVTEALSTL---NSGHEHFVAVASKFT 376
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 26.6 bits (56), Expect = 6.3
Identities = 16/61 (26%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +1
Query: 124 IFVGGLSSEISDDEIRNFFSEFGTI-LEVEMPFDKTKNQRKGFCFITF----ESEQVVND 288
+++G + ++ +++ + F+E G +V+ + K++ KG+CFI F E+ Q + D
Sbjct: 70 LWIGDVPTDWTEETLSQVFTECGHAPYKVKRVY--VKDELKGYCFIEFITFDEARQTLYD 127
Query: 289 L 291
L
Sbjct: 128 L 128
>U80842-8|AAB37951.1| 244|Caenorhabditis elegans Hypothetical
protein ZC239.12 protein.
Length = 244
Score = 26.6 bits (56), Expect = 6.3
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 121 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 225
++ +GG E S + F F T+LE E+P K
Sbjct: 9 RLNIGGTIFETSKSTLTKFDGFFKTLLETEIPIQK 43
>U80840-12|AAB37925.1| 694|Caenorhabditis elegans Hypothetical
protein F08D12.1 protein.
Length = 694
Score = 26.2 bits (55), Expect = 8.4
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +1
Query: 85 KVDPKKAKARHGKIFVGGLSSEISDDEIRN 174
K DPKKA++ K+F + +++ DE+ +
Sbjct: 534 KTDPKKAESLSAKLFPETMEVDVNVDELED 563
>L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical
protein R05D3.1 protein.
Length = 1053
Score = 26.2 bits (55), Expect = 8.4
Identities = 16/61 (26%), Positives = 25/61 (40%)
Frame = +1
Query: 172 NFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATP 351
NFF E +L + F N KG + + +++VN + +G VK A
Sbjct: 201 NFFGESHVVLPKIVSFVNNINTEKGGSHVDYVMDKIVNIIKPIVDSKLGDPTKSVKPAVI 260
Query: 352 K 354
K
Sbjct: 261 K 261
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 26.2 bits (55), Expect = 8.4
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 1 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 117
RGF IVF A ++++V G H +N+ K K K H
Sbjct: 488 RGFVEIVFCAITAMEQVKGYGTHLMNHCKDYMIKNKIYH 526
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,645,310
Number of Sequences: 27780
Number of extensions: 161160
Number of successful extensions: 677
Number of sequences better than 10.0: 102
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 598330768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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