Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2177
(711 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 36 0.006
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 33 0.040
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 31 0.21
SPBC649.04 |uvi15||UV-induced protein Uvi15|Schizosaccharomyces ... 30 0.28
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 29 0.66
SPAC2E1P3.05c |||fungal cellulose binding domain protein|Schizos... 28 1.5
SPBC342.05 |crb2|rhp9, rhp9|DNA repair protein RAD9 homolog, Rhp... 27 2.0
SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces ... 27 2.0
SPBC14F5.13c |||alkaline phosphatase |Schizosaccharomyces pombe|... 27 2.6
SPAC24B11.14 ||SPAC806.10|sequence orphan|Schizosaccharomyces po... 27 3.5
SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3 |Sch... 27 3.5
SPCC1840.04 |||caspase|Schizosaccharomyces pombe|chr 3|||Manual 27 3.5
SPBC16G5.05c |||MSP domain|Schizosaccharomyces pombe|chr 2|||Manual 26 4.6
SPAC644.12 |cdc5||cell division control protein Cdc5|Schizosacch... 26 4.6
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 26 4.6
SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa... 26 6.1
SPAC19A8.15 |trp2||tryptophan synthase|Schizosaccharomyces pombe... 26 6.1
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 25 8.1
SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1... 25 8.1
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 35.9 bits (79), Expect = 0.006
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Frame = +3
Query: 396 ITKHHNIVRHNNTSRKHS--PATTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKL 569
IT IV S S P+ TA+S + T+S+ L+ T+ + +R IS +++ +
Sbjct: 754 ITSSSAIVSSTTVSNISSNLPSATASSQSQLTNSSTLA-TSLYLSSSSSRTISTSSTNEY 812
Query: 570 SHNIK-PSLSRNTNHNLNTSLNPSPGINLNLSTNL 671
+ + P++S T+ + TSL + G+N N T+L
Sbjct: 813 NTSFHAPTVSSTTSSSSTTSLAANKGVNSNSITSL 847
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 33.1 bits (72), Expect = 0.040
Identities = 25/96 (26%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Frame = +3
Query: 414 IVRHNNTSRKHSPATTAASPMKTT--DSTILSYTNKRTTQLHN-----RD-ISLNNSTKL 569
+ R N +H+ T +P ++T DS + S++ + + RD +++ N +
Sbjct: 30 VCRDNIALSEHNVITVLDTPQRSTQCDSLLKSFSTPLVSGSEDVLPSPRDALNITNKKSV 89
Query: 570 SHNIKPSLSRNTNHNLNTSLNPSPGIN-LNLSTNLP 674
+ N+ SL+ ++N + NT+LNPS + +NL+++ P
Sbjct: 90 TDNLLLSLT-SSNQSTNTNLNPSSRVEIINLNSSPP 124
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 30.7 bits (66), Expect = 0.21
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 158 GAFGAAYQQEDGINFKEETDAEGNRKGSYSYIDPSGQRKTVNYI 289
G+F Q G+NF E+T + N + ++S D GQR+ VN +
Sbjct: 33 GSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVNML 76
>SPBC649.04 |uvi15||UV-induced protein Uvi15|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 87
Score = 30.3 bits (65), Expect = 0.28
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = +2
Query: 362 GYTPDP---RYNSPDYKAPQYSAPQQYVSQAQPRNYGGKP 472
GY P P Y P+Y PQ + PQQ + Q GG P
Sbjct: 11 GYAPAPPQQAYGGPNYYPPQQNYPQQGYAPPQGYPQGGYP 50
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 29.1 bits (62), Expect = 0.66
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +3
Query: 504 YTNKRTTQLHNRDISLNNSTKLSH----NIKPSLSRNTNHNLNTSLNPSPGINLNLSTNL 671
+TN + + + NNS + S+ N++PS + H N S+NP N++ +
Sbjct: 78 HTNANSRRNAAAAAAANNSARSSNSPAGNLEPSTNNAGVHMTNASMNP------NVNPSY 131
Query: 672 PIFIP 686
P+FIP
Sbjct: 132 PVFIP 136
>SPAC2E1P3.05c |||fungal cellulose binding domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 197
Score = 27.9 bits (59), Expect = 1.5
Identities = 21/79 (26%), Positives = 40/79 (50%)
Frame = +3
Query: 450 PATTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKLSHNIKPSLSRNTNHNLNTSL 629
P+++++S +T ST S + +T L + S +ST +I ++S + + + TSL
Sbjct: 110 PSSSSSSAASSTTSTTSSSSLVSSTTLTSSSPSAVSSTTSIPSISSTISSSVSTSSFTSL 169
Query: 630 NPSPGINLNLSTNLPIFIP 686
+ S + STN +P
Sbjct: 170 SSSGFSTVLSSTNTTSALP 188
>SPBC342.05 |crb2|rhp9, rhp9|DNA repair protein RAD9 homolog,
Rhp9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 522 TQLHNRDISLNNSTKLSHNIKPSLSRNTNHNLNTSLNPSP 641
T LH + L+ +++ + ++SRN +N S+NPSP
Sbjct: 6 TSLH-KGFGLDINSQRVFGAQAAISRNNYSKVNASINPSP 44
>SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 803
Score = 27.5 bits (58), Expect = 2.0
Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 7/105 (6%)
Frame = +3
Query: 399 TKHHNIVRHNNTSRKHSPATTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNS------ 560
+ H N+ + S +T+ P + + S + TTQ H+ IS +S
Sbjct: 593 SSHVPTAAFNSPIMRTSTKSTSPIPARPFYAQSGSLQSLNTTQ-HSHQISGGHSGRMNVP 651
Query: 561 -TKLSHNIKPSLSRNTNHNLNTSLNPSPGINLNLSTNLPIFIPVY 692
KLS+ +N N++ + P +N +LP+F P +
Sbjct: 652 YAKLSYTSHNGRHGGSNGNISGAKTPMTNYTINSMPSLPVFPPAF 696
>SPBC14F5.13c |||alkaline phosphatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 532
Score = 27.1 bits (57), Expect = 2.6
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -3
Query: 262 TRIDI*VAAFPVALSVGFFLKVDAVFLLVSGAKRAISAQVSCFLHYSRRFRIACVFGDTS 83
T +D+ + A S GFFL ++ + ++ A V + Y+R F IA F + +
Sbjct: 284 TALDVLLNATNEDTSKGFFLLIEGSRIDMASHNNDPIAHVYEVMEYNRAFEIASAFVEKN 343
Query: 82 G 80
G
Sbjct: 344 G 344
>SPAC24B11.14 ||SPAC806.10|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 166
Score = 26.6 bits (56), Expect = 3.5
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = -2
Query: 428 VVAHYIVVLCNLESCIEDQACSQELERQLEAQSECDRQRLGIHFC 294
V AH+ +V S + C+Q+ ER++ + +L FC
Sbjct: 118 VFAHFDIVPYTTYSILTKYRCAQDKEREIVGLINASQSKLRYKFC 162
>SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1133
Score = 26.6 bits (56), Expect = 3.5
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +3
Query: 465 ASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKLSHNIKP---SLSRNTNHNLNTSLNP 635
A M +S + +N + + D SL +LS+ + S++RNTN +++P
Sbjct: 102 AVDMYFDESFNIKNSNPDSESQKDTDASLTQMDQLSNTVSVKDLSINRNTNKKALNAVSP 161
Query: 636 SPGINLNLSTN 668
S LNLS+N
Sbjct: 162 S----LNLSSN 168
>SPCC1840.04 |||caspase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 425
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +2
Query: 371 PDPRYNSPDYKAPQYSAPQQYVSQAQPRNYGGKPN 475
P P + Y P YS PQ +Q Q N G N
Sbjct: 84 PPPNTGANSYGNPNYSGPQLPNTQTQSYNLAGGGN 118
>SPBC16G5.05c |||MSP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 26.2 bits (55), Expect = 4.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 552 NNSTKLSHNIKPSLSRNTNHNLNTSLNPSPGINLNL 659
++S IKPS S + + + SL SPGI N+
Sbjct: 332 HSSDNALEQIKPSYSADPSSSTGASLTESPGIPPNI 367
>SPAC644.12 |cdc5||cell division control protein
Cdc5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 757
Score = 26.2 bits (55), Expect = 4.6
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +1
Query: 247 IYRSEWP-EEDSELHRRQKWIPSRWRS 324
I ++EW EED +L K +P++WR+
Sbjct: 56 IKKTEWSREEDEKLLHLAKLLPTQWRT 82
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 26.2 bits (55), Expect = 4.6
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +3
Query: 456 TTAASPMKTTDSTILSYTNKRTTQLHN--RDISLNNSTKLSHNIKPSLSRNTNHNLNTSL 629
TT + T S++ + N +HN R SLN++ +H ++SRN HNL S
Sbjct: 730 TTDKPTLPDTTSSVPTQHNSFDA-MHNTLRSPSLNSNNSSAH--ASTVSRNPFHNLKISG 786
Query: 630 NPSPGIN 650
SP N
Sbjct: 787 ASSPVSN 793
>SPBC649.05 |cut12|stf1|spindle pole body protein Cut12
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 25.8 bits (54), Expect = 6.1
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = +3
Query: 426 NNTSRKHSPATTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKLSHNIKPSLSRNT 605
N S+ T SP+ T + S ++ R Q +L+ +SH L+ ++
Sbjct: 329 NRFSQMRELYTAKPSPITTKVVSRPSQSDVREPQEQVPSKNLHRGADMSHLAAQMLTHSS 388
Query: 606 NHNLNTSLNPSPGI 647
+ T+L PS GI
Sbjct: 389 KKSHTTNLIPSEGI 402
>SPAC19A8.15 |trp2||tryptophan synthase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 697
Score = 25.8 bits (54), Expect = 6.1
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 104 GDPKTAAIVQEARYLSGNGAFGAAYQQEDGINFKEETDAEG 226
GD KT +Q+A+ + NG E+ + F+EE +G
Sbjct: 111 GDAKT---IQKAKEVGANGFIIVDLPPEEAVGFREECKKQG 148
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.4 bits (53), Expect = 8.1
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +1
Query: 307 PSRWRSHSDCASSCRSNSWLHA*SSIQLSRLQSTTI*CATTIRLASTA 450
P+ + S +S+ SNS SS+ S L STT AT+ L+STA
Sbjct: 172 PTSSATSSSLSSTAASNSATS--SSLASSSLNSTTSATATSSSLSSTA 217
>SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1023
Score = 25.4 bits (53), Expect = 8.1
Identities = 16/67 (23%), Positives = 31/67 (46%)
Frame = +3
Query: 435 SRKHSPATTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKLSHNIKPSLSRNTNHN 614
S+K + ++ S + T S+I T L+ +L+ S L H+ +P +
Sbjct: 801 SQKSLASVSSVSSISTYSSSIELTPQITKTSLNREKPALHGSINLKHSTRPVVPIADGIY 860
Query: 615 LNTSLNP 635
+T+L+P
Sbjct: 861 ASTTLHP 867
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,458,607
Number of Sequences: 5004
Number of extensions: 48313
Number of successful extensions: 241
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 331187010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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