Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2177
(711 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024790-3|AAF60637.1| 446|Caenorhabditis elegans Hypothetical ... 35 0.066
Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z79753-6|CAI91165.1| 218|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z79753-5|CAE17798.1| 170|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.61
AL023842-4|CAA19517.2| 229|Caenorhabditis elegans Hypothetical ... 31 1.1
Z81460-2|CAB03831.1| 439|Caenorhabditis elegans Hypothetical pr... 30 1.9
AY741200-1|AAU89102.1| 596|Caenorhabditis elegans STE20-like se... 30 1.9
AL132898-15|CAC14417.2| 596|Caenorhabditis elegans Hypothetical... 30 1.9
AC084158-26|AAM15621.2| 216|Caenorhabditis elegans Hypothetical... 30 1.9
AC084158-25|AAM15620.2| 384|Caenorhabditis elegans Hypothetical... 30 1.9
Z92828-5|CAB07332.2| 586|Caenorhabditis elegans Hypothetical pr... 29 2.5
AF468834-1|AAL77082.1| 586|Caenorhabditis elegans PRY-1 protein. 29 2.5
U88168-5|AAM98000.1| 112|Caenorhabditis elegans Hypothetical pr... 29 3.3
AJ249344-1|CAB77052.1| 449|Caenorhabditis elegans putative inte... 29 3.3
AF099913-1|AAC68756.1| 466|Caenorhabditis elegans Paralysed arr... 29 3.3
Z78419-9|CAB01707.1| 1153|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z73907-3|CAA98126.1| 1153|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z36753-13|CAA85331.1| 598|Caenorhabditis elegans Hypothetical p... 29 4.3
U50312-1|AAA92318.1| 285|Caenorhabditis elegans Hypothetical pr... 29 4.3
U49831-8|AAA93409.2| 280|Caenorhabditis elegans Hypothetical pr... 28 5.7
U41039-5|AAL11488.1| 357|Caenorhabditis elegans Synapse defecti... 28 5.7
U41039-4|AAL11489.1| 452|Caenorhabditis elegans Synapse defecti... 28 5.7
U41039-3|AAK68627.2| 537|Caenorhabditis elegans Synapse defecti... 28 5.7
AY099352-1|AAM34494.1| 891|Caenorhabditis elegans gamma-tubulin... 28 5.7
AF040644-3|AAP82651.1| 336|Caenorhabditis elegans Gamma-tubulin... 28 5.7
AF040644-2|AAN63399.1| 963|Caenorhabditis elegans Gamma-tubulin... 28 5.7
AF040644-1|AAB94969.2| 891|Caenorhabditis elegans Gamma-tubulin... 28 5.7
Z49968-5|CAE47470.1| 1155|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z49968-4|CAA90261.1| 1156|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z46266-14|CAA86419.1| 1048|Caenorhabditis elegans Hypothetical p... 28 7.6
Z46266-10|CAA86416.1| 1207|Caenorhabditis elegans Hypothetical p... 28 7.6
Z37979-5|CAA86037.1| 1048|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z37979-1|CAA86034.1| 1207|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z37140-8|CAA85503.1| 1207|Caenorhabditis elegans Hypothetical pr... 28 7.6
AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical ... 28 7.6
AB011281-1|BAA24961.1| 254|Caenorhabditis elegans GAP-2-5 protein. 28 7.6
>AC024790-3|AAF60637.1| 446|Caenorhabditis elegans Hypothetical
protein Y47D7A.6 protein.
Length = 446
Score = 34.7 bits (76), Expect = 0.066
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 368 TPDPRYNSPDYKAPQYSAPQQYVSQAQPRNYGGKPN 475
TP +P Y P Y+AP++Y + P +Y KP+
Sbjct: 336 TPSSYDTTPSYSVPSYTAPKKYPVASPPSDYAQKPS 371
>Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical
protein T23F1.6 protein.
Length = 330
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 362 GYTPDPRYNSPD-YKAPQYSAPQQYVSQAQPRNYGGKPNEDDGQYYPELYEQEN 520
G T + YN+ D Y QY Q +Q Q +N PN+ QY Y+ +N
Sbjct: 153 GSTGNMMYNNQDPYNQMQYGGYNQQGNQYQNQNQYQNPNQIQNQYNQNQYQNQN 206
>Z79753-6|CAI91165.1| 218|Caenorhabditis elegans Hypothetical
protein F20G2.6b protein.
Length = 218
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Frame = +3
Query: 552 NNSTKLS-HNIKPSLSRNTNHNLNTSLNPSPG------INLNLSTNLPIFIPVY 692
NN T++S +N + S N N+N N + NPSP + N S P+++P Y
Sbjct: 98 NNDTEISCNNFNSNSSFNRNNNSNNTSNPSPPSYYAEVMATNSSALYPVYVPPY 151
>Z79753-5|CAE17798.1| 170|Caenorhabditis elegans Hypothetical
protein F20G2.6a protein.
Length = 170
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Frame = +3
Query: 552 NNSTKLS-HNIKPSLSRNTNHNLNTSLNPSPG------INLNLSTNLPIFIPVY 692
NN T++S +N + S N N+N N + NPSP + N S P+++P Y
Sbjct: 50 NNDTEISCNNFNSNSSFNRNNNSNNTSNPSPPSYYAEVMATNSSALYPVYVPPY 103
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.61
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +2
Query: 371 PDPRYNSPDYKAPQYSAPQQYVSQAQPRNYGGKPNEDDGQY 493
P P Y SP Y +P Y +P A KP + G Y
Sbjct: 373 PSPSYPSPSYPSPSYPSPSYPAEPAYSVPPPAKPEQPSGGY 413
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 371 PDPRYNSPDYKAPQYSAPQQYVSQAQPR-NYGGKP 472
P P Y SP Y +P Y +P Y S + P +Y +P
Sbjct: 363 PSPSYPSPSYPSPSYPSP-SYPSPSYPSPSYPAEP 396
>AL023842-4|CAA19517.2| 229|Caenorhabditis elegans Hypothetical
protein Y44A6D.3 protein.
Length = 229
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +3
Query: 462 AASPMKTTDSTILSYTNKRTTQLHNRDISLNN-STKLSHNIKPSLSRNTNHNLNTSLNPS 638
A +S+I + +HNRD + + + SH+ P+ N N+N N + N S
Sbjct: 41 AGREFNVAESSIREWRKNENKLIHNRDAAAARLNAQSSHSSGPARLNNMNNNNNNNHNHS 100
Query: 639 PGINL 653
N+
Sbjct: 101 KNNNI 105
>Z81460-2|CAB03831.1| 439|Caenorhabditis elegans Hypothetical
protein C04A11.2 protein.
Length = 439
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/85 (21%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Frame = +3
Query: 447 SPATTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNST----KLSHNIKPSLSRNTNHN 614
S +T++++ + + T R+ + R S N + ++ N++P +R ++ N
Sbjct: 145 STSTSSSTSTPVVRNILQQLTTPRSARTSTRAASGNRTPTGTPNMTRNVRPVTNRTSSSN 204
Query: 615 LNTSLNPSPGINLNLSTNLPIFIPV 689
++ + +PG + N + LP I V
Sbjct: 205 VSPAAQVTPGTSSNHRSRLPPTIRV 229
>AY741200-1|AAU89102.1| 596|Caenorhabditis elegans STE20-like
serine/threonine kinase protein.
Length = 596
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +3
Query: 411 NIVRHNNTSRKHSPATTAASPMKTTDSTILS--YTNKRTTQLHNRD-ISLNNSTKLSHNI 581
N+ + NT+ S A+ AA+ STI S T + TT N D +S ST H
Sbjct: 5 NLAGNTNTTTTSSAASAAAAHSAANASTITSEYSTTQTTTGTFNTDTLSSIGSTSTLHGS 64
Query: 582 KPS 590
+PS
Sbjct: 65 QPS 67
>AL132898-15|CAC14417.2| 596|Caenorhabditis elegans Hypothetical
protein Y59A8B.23 protein.
Length = 596
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +3
Query: 411 NIVRHNNTSRKHSPATTAASPMKTTDSTILS--YTNKRTTQLHNRD-ISLNNSTKLSHNI 581
N+ + NT+ S A+ AA+ STI S T + TT N D +S ST H
Sbjct: 5 NLAGNTNTTTTSSAASAAAAHSAANASTITSEYSTTQTTTGTFNTDTLSSIGSTSTLHGS 64
Query: 582 KPS 590
+PS
Sbjct: 65 QPS 67
>AC084158-26|AAM15621.2| 216|Caenorhabditis elegans Hypothetical
protein Y69A2AR.32b protein.
Length = 216
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 50 VAVSCQQHEGARRVPKYAGDPKTAAIVQEARYLSGNGAFG 169
V + +H G R P+Y+ DP + + + R L +GA+G
Sbjct: 39 VTSTSNEHVGQFRRPRYSADPTSNSTDLQLRPLDAHGAYG 78
>AC084158-25|AAM15620.2| 384|Caenorhabditis elegans Hypothetical
protein Y69A2AR.32a protein.
Length = 384
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 50 VAVSCQQHEGARRVPKYAGDPKTAAIVQEARYLSGNGAFG 169
V + +H G R P+Y+ DP + + + R L +GA+G
Sbjct: 207 VTSTSNEHVGQFRRPRYSADPTSNSTDLQLRPLDAHGAYG 246
>Z92828-5|CAB07332.2| 586|Caenorhabditis elegans Hypothetical
protein C37A5.9 protein.
Length = 586
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +3
Query: 435 SRKHSPATTAASPMKTTD---STILSYTNKRTTQLHNRDISLNNSTKLSHNIKPSLSRNT 605
S SP A P K+ + +T LS TN+ QLHN I + + SL +
Sbjct: 352 STNRSPKGPAGEPNKSGEGSKNTTLSPTNRAPAQLHN-TIRVPRRKDYPRDTSASLKSHR 410
Query: 606 NHNLNTS 626
+H ++T+
Sbjct: 411 HHQIDTN 417
>AF468834-1|AAL77082.1| 586|Caenorhabditis elegans PRY-1 protein.
Length = 586
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +3
Query: 435 SRKHSPATTAASPMKTTD---STILSYTNKRTTQLHNRDISLNNSTKLSHNIKPSLSRNT 605
S SP A P K+ + +T LS TN+ QLHN I + + SL +
Sbjct: 352 STNRSPKGPAGEPNKSGEGSKNTTLSPTNRAPAQLHN-TIRVPRRKDYPRDTSASLKSHR 410
Query: 606 NHNLNTS 626
+H ++T+
Sbjct: 411 HHQIDTN 417
>U88168-5|AAM98000.1| 112|Caenorhabditis elegans Hypothetical
protein K11H12.8b protein.
Length = 112
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 131 QEARYLSGNGAFGAAYQQEDGINFKEETDAEGNRKGS 241
+ ARY G FG+ Q GI T+AEG G+
Sbjct: 28 KSARYGGGQSGFGSRVNQSSGIRSSHWTNAEGATFGT 64
>AJ249344-1|CAB77052.1| 449|Caenorhabditis elegans putative
integrin-linked kinase protein.
Length = 449
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 576 NIKPSLSRNTNHNLNTSLNPSPGINLNLSTNLPI 677
+I P ++RN N +N +N PG N +PI
Sbjct: 410 HIPPGIARNMNRLMNICMNEDPGRRPNFDQIIPI 443
>AF099913-1|AAC68756.1| 466|Caenorhabditis elegans Paralysed arrest
at two-fold protein4 protein.
Length = 466
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 576 NIKPSLSRNTNHNLNTSLNPSPGINLNLSTNLPI 677
+I P ++RN N +N +N PG N +PI
Sbjct: 427 HIPPGIARNMNRLMNICMNEDPGRRPNFDQIIPI 460
>Z78419-9|CAB01707.1| 1153|Caenorhabditis elegans Hypothetical protein
F29D11.2 protein.
Length = 1153
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 501 SYTNKRTTQLHNRDISLNNSTKLSHNIKPSLSR 599
S TNKR L + DI+++N + + KP SR
Sbjct: 1049 SKTNKRNANLISTDIAVDNDVNMEEDDKPGPSR 1081
>Z73907-3|CAA98126.1| 1153|Caenorhabditis elegans Hypothetical protein
F29D11.2 protein.
Length = 1153
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 501 SYTNKRTTQLHNRDISLNNSTKLSHNIKPSLSR 599
S TNKR L + DI+++N + + KP SR
Sbjct: 1049 SKTNKRNANLISTDIAVDNDVNMEEDDKPGPSR 1081
>Z36753-13|CAA85331.1| 598|Caenorhabditis elegans Hypothetical
protein T09A5.2a protein.
Length = 598
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = +3
Query: 513 KRTTQLHNRDISLNNSTKLSHNIKPSLSRNTNH 611
++ QLHN+ + LN + ++ + I+P L+ T++
Sbjct: 230 EKRKQLHNQLVELNGNIRVFYRIRPQLASETDN 262
>U50312-1|AAA92318.1| 285|Caenorhabditis elegans Hypothetical
protein B0222.1 protein.
Length = 285
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 392 PDYKAPQYSAPQQYVSQAQPRNYGGKP 472
P AP YSAP Y + Q YGG+P
Sbjct: 247 PPPSAPVYSAPPPYNNFQQNSPYGGRP 273
>U49831-8|AAA93409.2| 280|Caenorhabditis elegans Hypothetical
protein F10C1.5 protein.
Length = 280
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 555 NSTKLSHNIKPSLSRNTNHNLNTSLNP-SPGINLNLSTNLPIFIPVYNK 698
+ T +S + P LS + N + S+ P SP N +++P+F PVY +
Sbjct: 152 SETVVSTSSPPELSSESTPNTSGSVIPTSPVFKPNGYSSMPMFNPVYGR 200
>U41039-5|AAL11488.1| 357|Caenorhabditis elegans Synapse defective
protein 9, isoforma protein.
Length = 357
Score = 28.3 bits (60), Expect = 5.7
Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = +3
Query: 396 ITKHHNIVRHNN--TSRKHSPATTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKL 569
+ K IV +N T+ +P T+ A+P T S+ L+ +N +N + ++NN+ +
Sbjct: 36 VKKAPKIVTKDNGPTTNGSTPTTSTATPSVITVSSALASSNGHNN--NNNNHAVNNNLR- 92
Query: 570 SHNIKPSLSRNTNHNLNTSLNPSPGINLNLSTN 668
IK L + ++NL P+P ++ ++T+
Sbjct: 93 --TIKMEL-EDPDYNLIAKSAPTPVVSKIVATH 122
>U41039-4|AAL11489.1| 452|Caenorhabditis elegans Synapse defective
protein 9, isoformd protein.
Length = 452
Score = 28.3 bits (60), Expect = 5.7
Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = +3
Query: 396 ITKHHNIVRHNN--TSRKHSPATTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKL 569
+ K IV +N T+ +P T+ A+P T S+ L+ +N +N + ++NN+ +
Sbjct: 131 VKKAPKIVTKDNGPTTNGSTPTTSTATPSVITVSSALASSNGHNN--NNNNHAVNNNLR- 187
Query: 570 SHNIKPSLSRNTNHNLNTSLNPSPGINLNLSTN 668
IK L + ++NL P+P ++ ++T+
Sbjct: 188 --TIKMEL-EDPDYNLIAKSAPTPVVSKIVATH 217
>U41039-3|AAK68627.2| 537|Caenorhabditis elegans Synapse defective
protein 9, isoformc protein.
Length = 537
Score = 28.3 bits (60), Expect = 5.7
Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = +3
Query: 396 ITKHHNIVRHNN--TSRKHSPATTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKL 569
+ K IV +N T+ +P T+ A+P T S+ L+ +N +N + ++NN+ +
Sbjct: 114 VKKAPKIVTKDNGPTTNGSTPTTSTATPSVITVSSALASSNGHNN--NNNNHAVNNNLR- 170
Query: 570 SHNIKPSLSRNTNHNLNTSLNPSPGINLNLSTN 668
IK L + ++NL P+P ++ ++T+
Sbjct: 171 --TIKMEL-EDPDYNLIAKSAPTPVVSKIVATH 200
>AY099352-1|AAM34494.1| 891|Caenorhabditis elegans gamma-tubulin
ring protein GRIP-1 protein.
Length = 891
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 531 HNRDISLNN--STKLSHNIKPSLSRNTNHNLNTSLNPSPGINLNLSTNLPI 677
HN D N + +H ++ T+H LNTS+ S N+N ++N PI
Sbjct: 239 HNSDFERNRGGAPNRAHQLRHP---TTSHLLNTSVTSSIRANVNSNSNTPI 286
>AF040644-3|AAP82651.1| 336|Caenorhabditis elegans Gamma-tubulin
interacting proteinprotein 1, isoform c protein.
Length = 336
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 531 HNRDISLNN--STKLSHNIKPSLSRNTNHNLNTSLNPSPGINLNLSTNLPI 677
HN D N + +H ++ T+H LNTS+ S N+N ++N PI
Sbjct: 239 HNSDFERNRGGAPNRAHQLRHP---TTSHLLNTSVTSSIRANVNSNSNTPI 286
>AF040644-2|AAN63399.1| 963|Caenorhabditis elegans Gamma-tubulin
interacting proteinprotein 1, isoform b protein.
Length = 963
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 531 HNRDISLNN--STKLSHNIKPSLSRNTNHNLNTSLNPSPGINLNLSTNLPI 677
HN D N + +H ++ T+H LNTS+ S N+N ++N PI
Sbjct: 239 HNSDFERNRGGAPNRAHQLRHP---TTSHLLNTSVTSSIRANVNSNSNTPI 286
>AF040644-1|AAB94969.2| 891|Caenorhabditis elegans Gamma-tubulin
interacting proteinprotein 1, isoform a protein.
Length = 891
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 531 HNRDISLNN--STKLSHNIKPSLSRNTNHNLNTSLNPSPGINLNLSTNLPI 677
HN D N + +H ++ T+H LNTS+ S N+N ++N PI
Sbjct: 239 HNSDFERNRGGAPNRAHQLRHP---TTSHLLNTSVTSSIRANVNSNSNTPI 286
>Z49968-5|CAE47470.1| 1155|Caenorhabditis elegans Hypothetical
protein M110.4b protein.
Length = 1155
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +2
Query: 377 PRYNSPDYKAPQ---YSAPQQYVSQAQPRNYGGKPNEDDGQYYPELYEQE 517
P+Y Y PQ Y PQ Q Q YGG D G + P++Y Q+
Sbjct: 56 PQYGQQQYNQPQTNHYYPPQAPQHQQQ---YGGYQRPDYG-HQPQMYNQQ 101
>Z49968-4|CAA90261.1| 1156|Caenorhabditis elegans Hypothetical
protein M110.4a protein.
Length = 1156
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +2
Query: 377 PRYNSPDYKAPQ---YSAPQQYVSQAQPRNYGGKPNEDDGQYYPELYEQE 517
P+Y Y PQ Y PQ Q Q YGG D G + P++Y Q+
Sbjct: 56 PQYGQQQYNQPQTNHYYPPQAPQHQQQ---YGGYQRPDYG-HQPQMYNQQ 101
>Z46266-14|CAA86419.1| 1048|Caenorhabditis elegans Hypothetical
protein ZK899.8e protein.
Length = 1048
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/85 (17%), Positives = 35/85 (41%)
Frame = +3
Query: 384 TTLQITKHHNIVRHNNTSRKHSPATTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNST 563
TTL + H+N++ +S H+ +T + + + +Y N + + + S
Sbjct: 48 TTLTASVHNNLMNGRMSSSSHNLSTRLSGSTQNLNQPTNAYGNLLSRPFRSNPLKRTKSV 107
Query: 564 KLSHNIKPSLSRNTNHNLNTSLNPS 638
++++ H ++ S PS
Sbjct: 108 SKMEKSLAEANQHSLHRVDASNTPS 132
>Z46266-10|CAA86416.1| 1207|Caenorhabditis elegans Hypothetical
protein ZK899.8a protein.
Length = 1207
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/85 (17%), Positives = 35/85 (41%)
Frame = +3
Query: 384 TTLQITKHHNIVRHNNTSRKHSPATTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNST 563
TTL + H+N++ +S H+ +T + + + +Y N + + + S
Sbjct: 207 TTLTASVHNNLMNGRMSSSSHNLSTRLSGSTQNLNQPTNAYGNLLSRPFRSNPLKRTKSV 266
Query: 564 KLSHNIKPSLSRNTNHNLNTSLNPS 638
++++ H ++ S PS
Sbjct: 267 SKMEKSLAEANQHSLHRVDASNTPS 291
>Z37979-5|CAA86037.1| 1048|Caenorhabditis elegans Hypothetical
protein ZK899.8e protein.
Length = 1048
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/85 (17%), Positives = 35/85 (41%)
Frame = +3
Query: 384 TTLQITKHHNIVRHNNTSRKHSPATTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNST 563
TTL + H+N++ +S H+ +T + + + +Y N + + + S
Sbjct: 48 TTLTASVHNNLMNGRMSSSSHNLSTRLSGSTQNLNQPTNAYGNLLSRPFRSNPLKRTKSV 107
Query: 564 KLSHNIKPSLSRNTNHNLNTSLNPS 638
++++ H ++ S PS
Sbjct: 108 SKMEKSLAEANQHSLHRVDASNTPS 132
>Z37979-1|CAA86034.1| 1207|Caenorhabditis elegans Hypothetical
protein ZK899.8a protein.
Length = 1207
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/85 (17%), Positives = 35/85 (41%)
Frame = +3
Query: 384 TTLQITKHHNIVRHNNTSRKHSPATTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNST 563
TTL + H+N++ +S H+ +T + + + +Y N + + + S
Sbjct: 207 TTLTASVHNNLMNGRMSSSSHNLSTRLSGSTQNLNQPTNAYGNLLSRPFRSNPLKRTKSV 266
Query: 564 KLSHNIKPSLSRNTNHNLNTSLNPS 638
++++ H ++ S PS
Sbjct: 267 SKMEKSLAEANQHSLHRVDASNTPS 291
>Z37140-8|CAA85503.1| 1207|Caenorhabditis elegans Hypothetical
protein ZK899.8a protein.
Length = 1207
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/85 (17%), Positives = 35/85 (41%)
Frame = +3
Query: 384 TTLQITKHHNIVRHNNTSRKHSPATTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNST 563
TTL + H+N++ +S H+ +T + + + +Y N + + + S
Sbjct: 207 TTLTASVHNNLMNGRMSSSSHNLSTRLSGSTQNLNQPTNAYGNLLSRPFRSNPLKRTKSV 266
Query: 564 KLSHNIKPSLSRNTNHNLNTSLNPS 638
++++ H ++ S PS
Sbjct: 267 SKMEKSLAEANQHSLHRVDASNTPS 291
>AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical
protein H16O14.1 protein.
Length = 977
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 444 HSPATTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTK 566
H A + ++ TDS I YT +RT ++ R+ L N K
Sbjct: 775 HLRIDAAVNVIEMTDSDISDYTYERTMKMEERNQYLKNLNK 815
>AB011281-1|BAA24961.1| 254|Caenorhabditis elegans GAP-2-5 protein.
Length = 254
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/85 (17%), Positives = 35/85 (41%)
Frame = +3
Query: 384 TTLQITKHHNIVRHNNTSRKHSPATTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNST 563
TTL + H+N++ +S H+ +T + + + +Y N + + + S
Sbjct: 48 TTLTASVHNNLMNGRMSSSSHNLSTRLSGSTQNLNQPTNAYGNLLSRPFRSNPLKRTKSV 107
Query: 564 KLSHNIKPSLSRNTNHNLNTSLNPS 638
++++ H ++ S PS
Sbjct: 108 SKMEKSLAEANQHSLHRVDASNTPS 132
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,827,244
Number of Sequences: 27780
Number of extensions: 284202
Number of successful extensions: 1272
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1265
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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