Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2175
         (769 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    24   1.8  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    22   7.2  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   9.5  

>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 556 FIFVICTTLVRVRVFLISFDK 618
           FIF+   +LVR R F I  DK
Sbjct: 22  FIFLYFNSLVRFRRFTIELDK 42


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 443 VTTDRHIRQNASQF 484
           + TD H++ NAS+F
Sbjct: 61  IWTDHHLKWNASEF 74


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/28 (25%), Positives = 17/28 (60%)
 Frame = -2

Query: 405 PIIDYLEKRRQLTPRQQLYMFVFLSICY 322
           PI+++L++      R  LY+ + +++ Y
Sbjct: 33  PIVEFLQQEDSSIRRDPLYIVLPITVIY 60


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,819
Number of Sequences: 438
Number of extensions: 4803
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)