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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2174
         (627 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef...   238   5e-64
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef...   237   7e-64
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef...   237   7e-64
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote...   146   3e-36
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa...   129   3e-31
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E...    93   3e-20
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce...    50   4e-07
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po...    43   4e-05
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su...    42   1e-04
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac...    36   0.006
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon...    36   0.006
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz...    35   0.011
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch...    34   0.019
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||...    30   0.24 
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma...    30   0.24 
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo...    29   0.42 
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce...    28   1.3  
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom...    25   9.0  
SPCC18.17c |||sequence orphan|Schizosaccharomyces pombe|chr 3|||...    25   9.0  

>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
           Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 460

 Score =  238 bits (582), Expect = 5e-64
 Identities = 114/143 (79%), Positives = 124/143 (86%)
 Frame = +3

Query: 198 KGSFKYAWVLDKLKAERERGITIDIAXWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAD 377
           KGSFKYAWVLDKLKAERERGITIDIA WKFET KY VT+IDAPGHRDFIKNMITGTSQAD
Sbjct: 51  KGSFKYAWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQAD 110

Query: 378 CAVLIVAAGTGEFEAGIXKNGQTREHALLAFTLGVKQLIVGVNKMDCTEPPYSEPRFEEI 557
           CAVLI+  GTGEFEAGI K+GQTREHALLA+TLGVKQLIV VNKMD T   +S+ RFEEI
Sbjct: 111 CAVLIIGGGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEI 168

Query: 558 KKEVF*YIKKIGYNPGAVAFVPI 626
            KE   +IKK+G+NP  V FVP+
Sbjct: 169 VKETSNFIKKVGFNPKTVPFVPV 191



 Score =  103 bits (247), Expect = 2e-23
 Identities = 46/51 (90%), Positives = 49/51 (96%)
 Frame = +2

Query: 47  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGE 199
           MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+G+
Sbjct: 1   MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGK 51


>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
           Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 460

 Score =  237 bits (581), Expect = 7e-64
 Identities = 113/143 (79%), Positives = 124/143 (86%)
 Frame = +3

Query: 198 KGSFKYAWVLDKLKAERERGITIDIAXWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAD 377
           KGSFKYAWVLDKLKAERERGITIDIA WKFET KY VT+IDAPGHRDFIKNMITGTSQAD
Sbjct: 51  KGSFKYAWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQAD 110

Query: 378 CAVLIVAAGTGEFEAGIXKNGQTREHALLAFTLGVKQLIVGVNKMDCTEPPYSEPRFEEI 557
           CA+LI+  GTGEFEAGI K+GQTREHALLA+TLGVKQLIV VNKMD T   +S+ RFEEI
Sbjct: 111 CAILIIGGGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEI 168

Query: 558 KKEVF*YIKKIGYNPGAVAFVPI 626
            KE   +IKK+G+NP  V FVP+
Sbjct: 169 VKETSNFIKKVGFNPKTVPFVPV 191



 Score =  103 bits (247), Expect = 2e-23
 Identities = 46/51 (90%), Positives = 49/51 (96%)
 Frame = +2

Query: 47  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGE 199
           MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+G+
Sbjct: 1   MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGK 51


>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
           Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 460

 Score =  237 bits (581), Expect = 7e-64
 Identities = 113/143 (79%), Positives = 124/143 (86%)
 Frame = +3

Query: 198 KGSFKYAWVLDKLKAERERGITIDIAXWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAD 377
           KGSFKYAWVLDKLKAERERGITIDIA WKFET KY VT+IDAPGHRDFIKNMITGTSQAD
Sbjct: 51  KGSFKYAWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQAD 110

Query: 378 CAVLIVAAGTGEFEAGIXKNGQTREHALLAFTLGVKQLIVGVNKMDCTEPPYSEPRFEEI 557
           CA+LI+  GTGEFEAGI K+GQTREHALLA+TLGVKQLIV VNKMD T   +S+ RFEEI
Sbjct: 111 CAILIIGGGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKMDTT--GWSQARFEEI 168

Query: 558 KKEVF*YIKKIGYNPGAVAFVPI 626
            KE   +IKK+G+NP  V FVP+
Sbjct: 169 VKETSNFIKKVGFNPKTVPFVPV 191



 Score =  103 bits (247), Expect = 2e-23
 Identities = 46/51 (90%), Positives = 49/51 (96%)
 Frame = +2

Query: 47  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGE 199
           MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+G+
Sbjct: 1   MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGK 51


>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
           protein|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 592

 Score =  146 bits (353), Expect = 3e-36
 Identities = 74/144 (51%), Positives = 93/144 (64%), Gaps = 1/144 (0%)
 Frame = +3

Query: 198 KGSFKYAWVLDKLKAERERGITIDIAXWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAD 377
           KGSF YAW+LD  + ER RG+T+D+A   FE+ K    I DAPGHRDFI  MI G S AD
Sbjct: 221 KGSFSYAWLLDTTEEERARGVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSAD 280

Query: 378 CAVLIVAAGTGEFEAGIXKNGQTREHALLAFTLGVKQLIVGVNKMDCTEPPYSEPRFEEI 557
            AVL+V +    FE G  +NGQTREHA L   LG+ +++V VNK+D     +SE RF+EI
Sbjct: 281 FAVLVVDSSQNNFERGFLENGQTREHAYLLRALGISEIVVSVNKLDLMS--WSEDRFQEI 338

Query: 558 KKEVF*Y-IKKIGYNPGAVAFVPI 626
           K  V  + IK +G+    V FVPI
Sbjct: 339 KNIVSDFLIKMVGFKTSNVHFVPI 362



 Score = 48.0 bits (109), Expect = 1e-06
 Identities = 20/47 (42%), Positives = 32/47 (68%)
 Frame = +2

Query: 59  KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGE 199
           K  +++VV GHVDSGKST  G ++++ G I+ R+++K   EA   G+
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGK 221


>SPCC584.04 |sup35|erf3|translation release factor eRF3
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 662

 Score =  129 bits (312), Expect = 3e-31
 Identities = 61/145 (42%), Positives = 94/145 (64%), Gaps = 2/145 (1%)
 Frame = +3

Query: 198 KGSFKYAWVLDKLKAERERGITIDIAXWKFETSKYYVTIIDAPGHRDFIKNMITGTSQAD 377
           K S+  +W LD    ERE+G T+++    FET     +++DAPGH+ ++ NMI G SQAD
Sbjct: 282 KESWYLSWALDSTSEEREKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQAD 341

Query: 378 CAVLIVAAGTGEFEAGIXKNGQTREHALLAFTLGVKQLIVGVNKMDCTEPPYSEPRFEEI 557
             VL+++A  GEFEAG  + GQTREHA+LA T G+  L+V +NKMD     +SE R++E 
Sbjct: 342 IGVLVISARRGEFEAGFERGGQTREHAVLARTQGINHLVVVINKMDEPSVQWSEERYKEC 401

Query: 558 KKEVF*YIKKI-GYNPGA-VAFVPI 626
             ++  +++++ GYN    V ++P+
Sbjct: 402 VDKLSMFLRRVAGYNSKTDVKYMPV 426



 Score = 64.9 bits (151), Expect = 9e-12
 Identities = 27/47 (57%), Positives = 38/47 (80%)
 Frame = +2

Query: 59  KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGE 199
           K H+NIV IGHVD+GKST  G++++  G +DKRT+EK E+EA+E G+
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGK 282


>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
           EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 439

 Score = 93.1 bits (221), Expect = 3e-20
 Identities = 47/105 (44%), Positives = 66/105 (62%)
 Frame = +3

Query: 225 LDKLKAERERGITIDIAXWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 404
           +DK   E+ RGITI  A  ++ET+  +   +D PGH D+IKNMITG +  D A+++V+A 
Sbjct: 91  IDKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSAT 150

Query: 405 TGEFEAGIXKNGQTREHALLAFTLGVKQLIVGVNKMDCTEPPYSE 539
            G+         QTREH LLA  +GVKQ++V +NK+D  EP   E
Sbjct: 151 DGQMP-------QTREHLLLARQVGVKQIVVYINKVDMVEPDMIE 188



 Score = 35.1 bits (77), Expect = 0.008
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = +2

Query: 53  KEKTHINIVVIGHVDSGKSTTTGHLIYKC 139
           ++K H+NI  IGHVD GK+T T   I KC
Sbjct: 49  RKKPHVNIGTIGHVDHGKTTLTA-AITKC 76


>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 813

 Score = 49.6 bits (113), Expect = 4e-07
 Identities = 36/98 (36%), Positives = 50/98 (51%)
 Frame = +3

Query: 222 VLDKLKAERERGITIDIAXWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 401
           V+D L AER+RGITI+ A   F      + +ID PGH DF   +    +  D AV I+  
Sbjct: 67  VMDYLPAERQRGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAII-- 124

Query: 402 GTGEFEAGIXKNGQTREHALLAFTLGVKQLIVGVNKMD 515
              +  AG+    QT+     A   G+ ++I  VNKMD
Sbjct: 125 ---DGSAGV--EAQTKVVWKQATKRGIPKVIF-VNKMD 156



 Score = 28.7 bits (61), Expect = 0.73
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +2

Query: 71  NIVVIGHVDSGKSTTTGHLIYKCG 142
           N+ +I H+D+GK+T T  ++Y  G
Sbjct: 30  NVGIIAHIDAGKTTLTEKMLYYGG 53


>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 646

 Score = 42.7 bits (96), Expect = 4e-05
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
 Frame = +3

Query: 225 LDKLKAERERGITIDIAX----WKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 392
           LDKL+ ER RGIT+        + +    Y + +ID PGH DF   ++   +  +  +L+
Sbjct: 95  LDKLEVERRRGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILL 154

Query: 393 VAAGTG 410
           V A  G
Sbjct: 155 VDASQG 160


>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
           subunit|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 446

 Score = 41.5 bits (93), Expect = 1e-04
 Identities = 23/87 (26%), Positives = 40/87 (45%)
 Frame = +3

Query: 303 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKNGQTREHALLAFTLGV 482
           +V+ +D PGH   +  M+ G +  D A+L++A              QT EH      + +
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162

Query: 483 KQLIVGVNKMDCTEPPYSEPRFEEIKK 563
           K +I+  NK+D      +E  ++ I K
Sbjct: 163 KHIIILQNKVDLIRESAAEEHYQSILK 189



 Score = 25.0 bits (52), Expect = 9.0
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +2

Query: 41  PKMGKEKTHINIVVIGHVDSGKST 112
           P +   +  INI  IGHV  GKST
Sbjct: 15  PAIISRQATINIGTIGHVAHGKST 38


>SPCP31B10.07 |eft202||translation elongation factor 2
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 842

 Score = 35.5 bits (78), Expect = 0.006
 Identities = 17/32 (53%), Positives = 19/32 (59%)
 Frame = +2

Query: 47  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 142
           MGK     N+ VI HVD GKST T  L+ K G
Sbjct: 13  MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44



 Score = 27.9 bits (59), Expect = 1.3
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 300 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 395
           + V +ID+PGH DF   +       D A+++V
Sbjct: 98  FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129


>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
           elongation factor 2 |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 842

 Score = 35.5 bits (78), Expect = 0.006
 Identities = 17/32 (53%), Positives = 19/32 (59%)
 Frame = +2

Query: 47  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 142
           MGK     N+ VI HVD GKST T  L+ K G
Sbjct: 13  MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44



 Score = 27.9 bits (59), Expect = 1.3
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 300 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 395
           + V +ID+PGH DF   +       D A+++V
Sbjct: 98  FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129


>SPBC1306.01c ||SPBC409.22c|translation elongation factor
           G|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 770

 Score = 34.7 bits (76), Expect = 0.011
 Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 19/106 (17%)
 Frame = +3

Query: 195 VKGSFKYAWVLDKLKAERERGITIDIAX----WK---------------FETSKYYVTII 317
           V+G       +D ++ ERE+GITI  A     W+               FE S Y + II
Sbjct: 92  VRGKDNVGAKMDFMELEREKGITIQSAATHCTWERTVDQIEANEKQKTDFEKS-YNINII 150

Query: 318 DAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIXKNGQTREH 455
           D PGH DF   +       D AVL++ A +G     I  + Q R +
Sbjct: 151 DTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196



 Score = 29.1 bits (62), Expect = 0.55
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 71  NIVVIGHVDSGKSTTTGHLIYKCGGI 148
           NI +  H+DSGK+T T  ++Y  G I
Sbjct: 61  NIGISAHIDSGKTTFTERVLYYTGRI 86


>SPBC1271.15c |||translation initiation factor
           IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 686

 Score = 33.9 bits (74), Expect = 0.019
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = +3

Query: 255 GITIDIAXWK--FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 410
           GIT  I  +   F+    ++T +D PGH  F      G + AD  VL+VA   G
Sbjct: 203 GITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDG 256


>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 380

 Score = 30.3 bits (65), Expect = 0.24
 Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
 Frame = +3

Query: 228 DKLKAER-ERGITIDIAXWKFETSKYYV--TIIDAPGHRDFIKN 350
           +K++A+  E+ + I+I   + E   +++  T+ID PG  DFI N
Sbjct: 60  EKVRAKHAEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103


>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1000

 Score = 30.3 bits (65), Expect = 0.24
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +3

Query: 300 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 410
           Y + +ID+PGH DF   + + +   D A ++V A  G
Sbjct: 94  YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130


>SPAC56F8.03 |||translation initiation factor IF2
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1079

 Score = 29.5 bits (63), Expect = 0.42
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 312 IIDAPGHRDFIKNMITGTSQADCAVLIV 395
           IID PGH  F      GTS  + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580


>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 983

 Score = 27.9 bits (59), Expect = 1.3
 Identities = 14/56 (25%), Positives = 30/56 (53%)
 Frame = +3

Query: 228 DKLKAERERGITIDIAXWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 395
           +++ + +   +T+ ++  K +T  +    ID PGH DF+  +    + +D  VL+V
Sbjct: 187 ERVMSIKSTPLTLAVSDMKGKTFAFQC--IDTPGHVDFVDEVAAPMAISDGVVLVV 240


>SPBC1703.13c |||inorganic phosphate transporter
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 311

 Score = 25.0 bits (52), Expect = 9.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 188 PGPPSRTSRWYVCQYHHIC 132
           P PP +T + Y  QY+ +C
Sbjct: 8   PAPPKKTLQLYTPQYYGLC 26


>SPCC18.17c |||sequence orphan|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 488

 Score = 25.0 bits (52), Expect = 9.0
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 228 PIPKHI*RILSPISWASFSNFSM 160
           PI K + ++L P+SWA    F +
Sbjct: 73  PIMKALGKLLEPMSWADLKKFGI 95


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,574,883
Number of Sequences: 5004
Number of extensions: 51201
Number of successful extensions: 181
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 175
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 277683324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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