Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2168
         (725 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB020643-1|BAA74859.1|  609|Homo sapiens KIAA0836 protein protein.    186   7e-47
AY635582-1|AAT48654.1|  617|Homo sapiens glucuronyl C5-epimerase...   186   9e-47
AB019692-1|BAA85625.1|  889|Homo sapiens protein kinase PKNbeta ...    32   2.4  

>AB020643-1|BAA74859.1|  609|Homo sapiens KIAA0836 protein protein.
          Length = 609

 Score =  186 bits (453), Expect = 7e-47
 Identities = 79/137 (57%), Positives = 102/137 (74%)
 Frame = +2

Query: 23  SHAGGVKALWMDKFVWYEEYPTKPPLFVLNGFIYTLLGLYDLHVIEGENSMSLAKKMFDD 202
           S   GVKA++M+K  WYEEYPT P  FVLNGF+Y+L+GLYDL    GE     A+ +++ 
Sbjct: 473 SEQHGVKAVFMNKHDWYEEYPTTPSSFVLNGFMYSLIGLYDLKETAGEKLGKEARSLYER 532

Query: 203 GMTSLKTLLPLFDTGSGSFYDLRHFTLGVSPNIARWDYHATHVNQLYLLAGLDDDPILMN 382
           GM SLK +LPL+DTGSG+ YDLRHF LG++PN+ARWDYH TH+NQL LL+ +D+ PI   
Sbjct: 533 GMESLKAMLPLYDTGSGTIYDLRHFMLGIAPNLARWDYHTTHINQLQLLSTIDESPIFKE 592

Query: 383 TAKRWEGYMQGKRAAHN 433
             KRW+ Y++G RA HN
Sbjct: 593 FVKRWKSYLKGSRAKHN 609


>AY635582-1|AAT48654.1|  617|Homo sapiens glucuronyl C5-epimerase
           protein.
          Length = 617

 Score =  186 bits (452), Expect = 9e-47
 Identities = 78/137 (56%), Positives = 102/137 (74%)
 Frame = +2

Query: 23  SHAGGVKALWMDKFVWYEEYPTKPPLFVLNGFIYTLLGLYDLHVIEGENSMSLAKKMFDD 202
           S   GVKA++M+K  WYEEYPT P  FVLNGF+Y+L+GLYDL    GE     A+ +++ 
Sbjct: 481 SEQHGVKAVFMNKHDWYEEYPTTPSSFVLNGFMYSLIGLYDLKETAGEKLGKEARSLYER 540

Query: 203 GMTSLKTLLPLFDTGSGSFYDLRHFTLGVSPNIARWDYHATHVNQLYLLAGLDDDPILMN 382
           GM SLK +LPL+DTGSG+ YDLRHF LG++PN+ARWDYH TH+NQL LL+ +D+ P+   
Sbjct: 541 GMESLKAMLPLYDTGSGTIYDLRHFMLGIAPNLARWDYHTTHINQLQLLSTIDESPVFKE 600

Query: 383 TAKRWEGYMQGKRAAHN 433
             KRW+ Y++G RA HN
Sbjct: 601 FVKRWKSYLKGSRAKHN 617


>AB019692-1|BAA85625.1|  889|Homo sapiens protein kinase PKNbeta
           protein.
          Length = 889

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 19/63 (30%), Positives = 32/63 (50%)
 Frame = -2

Query: 568 CHGLSHSLRPERALIAKALKSRIIESRRSNRQGHHKIFQRTTHISVMRRSFTLHVSLPSF 389
           CH LS SL P+  L A+      +  RR   Q   +IF +      +RRS  +++ + ++
Sbjct: 396 CHQLSLSLVPQGLLFAQVTFCDPVIERRPRLQRQERIFSKRRGQDFLRRS-QMNLGMAAW 454

Query: 388 GRV 380
           GR+
Sbjct: 455 GRL 457


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,430,232
Number of Sequences: 237096
Number of extensions: 2418108
Number of successful extensions: 4920
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4920
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)