Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2164
         (787 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2698|AAF49490.1|  185|Drosophila melanogaster CG13040-P...    34   0.19 
AY071564-1|AAL49186.1|  124|Drosophila melanogaster RE63063p pro...    31   1.3  
AY071377-1|AAL48999.1|  131|Drosophila melanogaster RE40431p pro...    31   1.3  
AE014296-2696|AAF49492.1|  131|Drosophila melanogaster CG13060-P...    31   1.3  
AE014296-2695|AAF49493.1|  124|Drosophila melanogaster CG13041-P...    31   1.3  
BT001351-1|AAN71106.1|  758|Drosophila melanogaster AT25963p pro...    29   5.4  
BT001254-1|AAN71010.1|  758|Drosophila melanogaster AT01057p pro...    29   5.4  
AY069522-1|AAL39667.1|  551|Drosophila melanogaster LD23843p pro...    29   5.4  
AE014297-3441|AAN13975.2|  758|Drosophila melanogaster CG5977-PB...    29   5.4  
AE014297-3440|AAF56223.3|  758|Drosophila melanogaster CG5977-PA...    29   5.4  
U25686-1|AAA83228.1| 1221|Drosophila melanogaster E93 protein.         29   7.2  
BT010034-1|AAQ22503.1| 1188|Drosophila melanogaster LP08695p pro...    29   7.2  
AY051679-1|AAK93103.1|  424|Drosophila melanogaster LD22902p pro...    29   7.2  
AF152245-1|AAD38047.1|  424|Drosophila melanogaster MRG15 protein.     29   7.2  
AE014297-3075|AAF55940.3| 1165|Drosophila melanogaster CG18389-P...    29   7.2  
AE014297-1988|AAF55161.1|  424|Drosophila melanogaster CG6363-PA...    29   7.2  
AE014297-2332|AAF55402.1| 2112|Drosophila melanogaster CG4090-PA...    29   9.5  

>AE014296-2698|AAF49490.1|  185|Drosophila melanogaster CG13040-PA
           protein.
          Length = 185

 Score = 34.3 bits (75), Expect = 0.19
 Identities = 38/151 (25%), Positives = 56/151 (37%), Gaps = 12/151 (7%)
 Frame = +2

Query: 329 IHSSPAIVSH---------AITTPVLTHSAIAHFPVLTQSTLGHEHFLKKRSVALVAPSA 481
           +HS+P   SH         A+ TPV+ H  +   PV+   T+     + K  VA + P  
Sbjct: 39  VHSAPLATSHQSFTQYHNQAVLTPVVKH-VVPAVPVI--KTVAPVVPVVKH-VAPIVPVV 94

Query: 482 VSHQARVDVISKPTLVSHAV-IAPILRHSV-ATPFVTHXXXXXXXXXXXXXXSHQSRVDV 655
                 V V+     V   +   P++ H     P V H              SHQS   V
Sbjct: 95  KQVAPIVPVVKHVAPVVPVIKTVPVVHHQTYVAPAVHHVAAVPVVKALPHAVSHQSHTQV 154

Query: 656 HSSPAVVTHAISP-LSAVWTGATYGAHSISH 745
           H    ++T  ++P +  V   A   AH   H
Sbjct: 155 HHQKTIITPVVAPVVKTVAVAAAPVAHVYHH 185


>AY071564-1|AAL49186.1|  124|Drosophila melanogaster RE63063p
           protein.
          Length = 124

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 22/44 (50%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +2

Query: 431 HEHFLKK-RSVALVAPSAVSHQARVDVISKPTLVSHAVIAPILR 559
           HE  L K  SV   APSAVSHQ+   V SK   V   V+API++
Sbjct: 27  HEPVLAKVGSVVHSAPSAVSHQSITQVHSK--AVVQPVVAPIVK 68


>AY071377-1|AAL48999.1|  131|Drosophila melanogaster RE40431p
           protein.
          Length = 131

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 22/44 (50%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +2

Query: 431 HEHFLKK-RSVALVAPSAVSHQARVDVISKPTLVSHAVIAPILR 559
           HE  L K  SV   APSAVSHQ+   V SK   V   V+API++
Sbjct: 27  HEPVLAKVGSVVHSAPSAVSHQSITQVHSK--AVVQPVVAPIVK 68


>AE014296-2696|AAF49492.1|  131|Drosophila melanogaster CG13060-PA
           protein.
          Length = 131

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 22/44 (50%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +2

Query: 431 HEHFLKK-RSVALVAPSAVSHQARVDVISKPTLVSHAVIAPILR 559
           HE  L K  SV   APSAVSHQ+   V SK   V   V+API++
Sbjct: 27  HEPVLAKVGSVVHSAPSAVSHQSITQVHSK--AVVQPVVAPIVK 68


>AE014296-2695|AAF49493.1|  124|Drosophila melanogaster CG13041-PA
           protein.
          Length = 124

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 22/44 (50%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +2

Query: 431 HEHFLKK-RSVALVAPSAVSHQARVDVISKPTLVSHAVIAPILR 559
           HE  L K  SV   APSAVSHQ+   V SK   V   V+API++
Sbjct: 27  HEPVLAKVGSVVHSAPSAVSHQSITQVHSK--AVVQPVVAPIVK 68


>BT001351-1|AAN71106.1|  758|Drosophila melanogaster AT25963p
           protein.
          Length = 758

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -3

Query: 311 AIRRQVLQQERLSGRQVRRQRALDGRRDAPEP*LAGVERE 192
           A+R Q LQ +RLS ++ +++ A    +   EP LAG+  E
Sbjct: 309 ALREQDLQMQRLSLKEKQKEEAQSKPQKTREPMLAGMTNE 348


>BT001254-1|AAN71010.1|  758|Drosophila melanogaster AT01057p
           protein.
          Length = 758

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -3

Query: 311 AIRRQVLQQERLSGRQVRRQRALDGRRDAPEP*LAGVERE 192
           A+R Q LQ +RLS ++ +++ A    +   EP LAG+  E
Sbjct: 309 ALREQDLQMQRLSLKEKQKEEAQSKPQKTREPMLAGMTNE 348


>AY069522-1|AAL39667.1|  551|Drosophila melanogaster LD23843p
           protein.
          Length = 551

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -3

Query: 311 AIRRQVLQQERLSGRQVRRQRALDGRRDAPEP*LAGVERE 192
           A+R Q LQ +RLS ++ +++ A    +   EP LAG+  E
Sbjct: 102 ALREQDLQMQRLSLKEKQKEEAQSKPQKTREPMLAGMTNE 141


>AE014297-3441|AAN13975.2|  758|Drosophila melanogaster CG5977-PB,
           isoform B protein.
          Length = 758

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -3

Query: 311 AIRRQVLQQERLSGRQVRRQRALDGRRDAPEP*LAGVERE 192
           A+R Q LQ +RLS ++ +++ A    +   EP LAG+  E
Sbjct: 309 ALREQDLQMQRLSLKEKQKEEAQSKPQKTREPMLAGMTNE 348


>AE014297-3440|AAF56223.3|  758|Drosophila melanogaster CG5977-PA,
           isoform A protein.
          Length = 758

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -3

Query: 311 AIRRQVLQQERLSGRQVRRQRALDGRRDAPEP*LAGVERE 192
           A+R Q LQ +RLS ++ +++ A    +   EP LAG+  E
Sbjct: 309 ALREQDLQMQRLSLKEKQKEEAQSKPQKTREPMLAGMTNE 348


>U25686-1|AAA83228.1| 1221|Drosophila melanogaster E93 protein.
          Length = 1221

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = -1

Query: 592 SMSYKGGSHGVSQNRGNHSMGHQSRLRNNVNASLMGNS*RSNQSHRS 452
           S    G +   S + G    GH   L NN + S+  NS  S+ SHR+
Sbjct: 582 SFKVSGPASSSSLSPGGLVGGHHHPLNNNNSLSISNNSNHSSNSHRN 628


>BT010034-1|AAQ22503.1| 1188|Drosophila melanogaster LP08695p
           protein.
          Length = 1188

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = -1

Query: 592 SMSYKGGSHGVSQNRGNHSMGHQSRLRNNVNASLMGNS*RSNQSHRS 452
           S    G +   S + G    GH   L NN + S+  NS  S+ SHR+
Sbjct: 605 SFKVSGPASSSSLSPGGLVGGHHHPLNNNNSLSISNNSNHSSNSHRN 651


>AY051679-1|AAK93103.1|  424|Drosophila melanogaster LD22902p
           protein.
          Length = 424

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -3

Query: 179 PLYPGDDHGDPAPAQDGEAVAPMAPKNRR 93
           P  P D   DPA A+  E   P+APK +R
Sbjct: 181 PGTPSDKKEDPAAAETTEEEGPVAPKKKR 209


>AF152245-1|AAD38047.1|  424|Drosophila melanogaster MRG15 protein.
          Length = 424

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -3

Query: 179 PLYPGDDHGDPAPAQDGEAVAPMAPKNRR 93
           P  P D   DPA A+  E   P+APK +R
Sbjct: 181 PGTPSDKKEDPAAAETTEEEGPVAPKKKR 209


>AE014297-3075|AAF55940.3| 1165|Drosophila melanogaster CG18389-PA
           protein.
          Length = 1165

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = -1

Query: 592 SMSYKGGSHGVSQNRGNHSMGHQSRLRNNVNASLMGNS*RSNQSHRS 452
           S    G +   S + G    GH   L NN + S+  NS  S+ SHR+
Sbjct: 582 SFKVSGPASSSSLSPGGLVGGHHHPLNNNNSLSISNNSNHSSNSHRN 628


>AE014297-1988|AAF55161.1|  424|Drosophila melanogaster CG6363-PA
           protein.
          Length = 424

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -3

Query: 179 PLYPGDDHGDPAPAQDGEAVAPMAPKNRR 93
           P  P D   DPA A+  E   P+APK +R
Sbjct: 181 PGTPSDKKEDPAAAETTEEEGPVAPKKKR 209


>AE014297-2332|AAF55402.1| 2112|Drosophila melanogaster CG4090-PA
            protein.
          Length = 2112

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
 Frame = -1

Query: 592  SMSYKGGS--HGVSQNRGNHSMGHQSRLRNNVNASLMGNS*RSNQSHRSFLQKVF-VSKS 422
            S S +G S   G S N+G+ S    S  +++ N S    S  SNQ+  S  QK F  ++ 
Sbjct: 915  SSSNQGSSSNQGSSSNQGSSSNQSSSSNQSSSNQSSSNQSSSSNQTSSSTTQKPFKPAEK 974

Query: 421  *LSQDRKMCNSRVCK--HRCGDS 359
              S++  + ++  C   +RC D+
Sbjct: 975  CESEETFLADNENCSKFYRCVDN 997


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,211,163
Number of Sequences: 53049
Number of extensions: 593645
Number of successful extensions: 2659
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2655
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)