Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2163
(415 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK022902-1|BAB14299.1| 324|Homo sapiens protein ( Homo sapiens ... 31 1.1
D13636-1|BAA02800.1| 911|Homo sapiens KIAA0011 protein. 31 2.0
BT009799-1|AAP88801.1| 911|Homo sapiens general transcription f... 31 2.0
BC106017-1|AAI06018.1| 867|Homo sapiens SETX protein protein. 31 2.0
BC032622-1|AAH32622.2| 1030|Homo sapiens SETX protein protein. 31 2.0
BC032600-1|AAH32600.1| 828|Homo sapiens SETX protein protein. 31 2.0
BC020981-1|AAH20981.1| 911|Homo sapiens general transcription f... 31 2.0
BC000212-1|AAH00212.1| 585|Homo sapiens GTF3C2 protein protein. 31 2.0
AY362728-1|AAR13367.1| 2677|Homo sapiens ataxia/oculomotor aprax... 31 2.0
AL353701-2|CAM14151.1| 2677|Homo sapiens senataxin protein. 31 2.0
AL159997-5|CAI40857.1| 948|Homo sapiens senataxin protein. 31 2.0
AL159997-2|CAI40854.1| 2677|Homo sapiens senataxin protein. 31 2.0
AK001456-1|BAA91701.1| 828|Homo sapiens protein ( Homo sapiens ... 31 2.0
AC109828-1|AAY24049.1| 534|Homo sapiens unknown protein. 31 2.0
AB014525-1|BAA31600.2| 2663|Homo sapiens KIAA0625 protein protein. 31 2.0
U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein. 30 2.6
AF348833-1|AAK27705.1| 163|Homo sapiens immunoglobulin heavy ch... 30 3.5
AF348831-1|AAK27703.1| 163|Homo sapiens immunoglobulin heavy ch... 30 3.5
AY971122-1|AAY18543.1| 130|Homo sapiens immunoglobulin alpha he... 29 6.1
X02647-1|CAA26485.1| 351|Homo sapiens c-src protein. 29 8.1
U44493-1|AAD00040.1| 98|Homo sapiens IgE heavy chain protein. 29 8.1
L28821-1|AAA92022.1| 796|Homo sapiens alpha mannosidase II isoz... 29 8.1
K03218-1|AAA60584.1| 536|Homo sapiens SRC protein. 29 8.1
D55649-1|BAA09510.1| 1139|Homo sapiens alpha mannosidase II isoz... 29 8.1
BC051270-1|AAH51270.2| 536|Homo sapiens v-src sarcoma (Schmidt-... 29 8.1
BC031227-1|AAH31227.2| 452|Homo sapiens WDR88 protein protein. 29 8.1
BC011566-1|AAH11566.1| 536|Homo sapiens SRC protein protein. 29 8.1
AL133293-2|CAC34523.1| 536|Homo sapiens v-src sarcoma (Schmidt-... 29 8.1
AL133293-1|CAC10573.1| 542|Homo sapiens v-src sarcoma (Schmidt-... 29 8.1
AK024281-1|BAB14871.1| 251|Homo sapiens protein ( Homo sapiens ... 29 8.1
>AK022902-1|BAB14299.1| 324|Homo sapiens protein ( Homo sapiens
cDNA FLJ12840 fis, clone NT2RP2003277, weakly similar to
NAM7 PROTEIN. ).
Length = 324
Score = 31.5 bits (68), Expect = 1.1
Identities = 20/53 (37%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = +3
Query: 42 PPT--TGVEFIRTTWSHCGHPQCVSRDLFCHVPSGYGMSSPPRCSPSAMTCPS 194
PPT G+ + SH P V L H P G PP SP A TC S
Sbjct: 217 PPTGEPGLPVVHQDLSHVQQPAAVVAALSSHKPPVRG--EPPAASPEASTCQS 267
>D13636-1|BAA02800.1| 911|Homo sapiens KIAA0011 protein.
Length = 911
Score = 30.7 bits (66), Expect = 2.0
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +2
Query: 8 EMIPASRFYHRTAHHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVFPER 178
E IP + +H + + PY + +S QR LP L+ N S T PER
Sbjct: 329 EWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAHPER 386
Query: 179 YDMSFFKRG-LW 211
+D+SFF G LW
Sbjct: 387 WDVSFFTGGPLW 398
>BT009799-1|AAP88801.1| 911|Homo sapiens general transcription
factor IIIC, polypeptide 2, beta 110kDa protein.
Length = 911
Score = 30.7 bits (66), Expect = 2.0
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +2
Query: 8 EMIPASRFYHRTAHHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVFPER 178
E IP + +H + + PY + +S QR LP L+ N S T PER
Sbjct: 329 EWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAHPER 386
Query: 179 YDMSFFKRG-LW 211
+D+SFF G LW
Sbjct: 387 WDVSFFTGGPLW 398
>BC106017-1|AAI06018.1| 867|Homo sapiens SETX protein protein.
Length = 867
Score = 30.7 bits (66), Expect = 2.0
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Frame = +3
Query: 42 PPT--TGVEFIRTTWSHCGHPQCVSRDLFCHVPSGYGMSSPPRCSPSAMTCPS 194
PPT G + SH P V L H P G PP SP A TC S
Sbjct: 760 PPTGEPGFPVVHQDLSHVQQPAAVVAALSSHKPPVRG--EPPAASPEASTCQS 810
>BC032622-1|AAH32622.2| 1030|Homo sapiens SETX protein protein.
Length = 1030
Score = 30.7 bits (66), Expect = 2.0
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Frame = +3
Query: 42 PPT--TGVEFIRTTWSHCGHPQCVSRDLFCHVPSGYGMSSPPRCSPSAMTCPS 194
PPT G + SH P V L H P G PP SP A TC S
Sbjct: 923 PPTGEPGFPVVHQDLSHIQQPAAVVAALSSHKPPVRG--EPPAASPEASTCQS 973
>BC032600-1|AAH32600.1| 828|Homo sapiens SETX protein protein.
Length = 828
Score = 30.7 bits (66), Expect = 2.0
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Frame = +3
Query: 42 PPT--TGVEFIRTTWSHCGHPQCVSRDLFCHVPSGYGMSSPPRCSPSAMTCPS 194
PPT G + SH P V L H P G PP SP A TC S
Sbjct: 721 PPTGEPGFPVVHQDLSHIQQPAAVVAALSSHKPPVRG--EPPAASPEASTCQS 771
>BC020981-1|AAH20981.1| 911|Homo sapiens general transcription
factor IIIC, polypeptide 2, beta 110kDa protein.
Length = 911
Score = 30.7 bits (66), Expect = 2.0
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +2
Query: 8 EMIPASRFYHRTAHHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVFPER 178
E IP + +H + + PY + +S QR LP L+ N S T PER
Sbjct: 329 EWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAHPER 386
Query: 179 YDMSFFKRG-LW 211
+D+SFF G LW
Sbjct: 387 WDVSFFTGGPLW 398
>BC000212-1|AAH00212.1| 585|Homo sapiens GTF3C2 protein protein.
Length = 585
Score = 30.7 bits (66), Expect = 2.0
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +2
Query: 8 EMIPASRFYHRTAHHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVFPER 178
E IP + +H + + PY + +S QR LP L+ N S T PER
Sbjct: 329 EWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAHPER 386
Query: 179 YDMSFFKRG-LW 211
+D+SFF G LW
Sbjct: 387 WDVSFFTGGPLW 398
>AY362728-1|AAR13367.1| 2677|Homo sapiens ataxia/oculomotor apraxia
protein 2 protein.
Length = 2677
Score = 30.7 bits (66), Expect = 2.0
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Frame = +3
Query: 42 PPT--TGVEFIRTTWSHCGHPQCVSRDLFCHVPSGYGMSSPPRCSPSAMTCPS 194
PPT G + SH P V L H P G PP SP A TC S
Sbjct: 2570 PPTGEPGFPVVHQDLSHIQQPAAVVAALSSHKPPVRG--EPPAASPEASTCQS 2620
>AL353701-2|CAM14151.1| 2677|Homo sapiens senataxin protein.
Length = 2677
Score = 30.7 bits (66), Expect = 2.0
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Frame = +3
Query: 42 PPT--TGVEFIRTTWSHCGHPQCVSRDLFCHVPSGYGMSSPPRCSPSAMTCPS 194
PPT G + SH P V L H P G PP SP A TC S
Sbjct: 2570 PPTGEPGFPVVHQDLSHIQQPAAVVAALSSHKPPVRG--EPPAASPEASTCQS 2620
>AL159997-5|CAI40857.1| 948|Homo sapiens senataxin protein.
Length = 948
Score = 30.7 bits (66), Expect = 2.0
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Frame = +3
Query: 42 PPT--TGVEFIRTTWSHCGHPQCVSRDLFCHVPSGYGMSSPPRCSPSAMTCPS 194
PPT G + SH P V L H P G PP SP A TC S
Sbjct: 841 PPTGEPGFPVVHQDLSHIQQPAAVVAALSSHKPPVRG--EPPAASPEASTCQS 891
>AL159997-2|CAI40854.1| 2677|Homo sapiens senataxin protein.
Length = 2677
Score = 30.7 bits (66), Expect = 2.0
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Frame = +3
Query: 42 PPT--TGVEFIRTTWSHCGHPQCVSRDLFCHVPSGYGMSSPPRCSPSAMTCPS 194
PPT G + SH P V L H P G PP SP A TC S
Sbjct: 2570 PPTGEPGFPVVHQDLSHIQQPAAVVAALSSHKPPVRG--EPPAASPEASTCQS 2620
>AK001456-1|BAA91701.1| 828|Homo sapiens protein ( Homo sapiens
cDNA FLJ10594 fis, clone NT2RP2004689. ).
Length = 828
Score = 30.7 bits (66), Expect = 2.0
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Frame = +3
Query: 42 PPT--TGVEFIRTTWSHCGHPQCVSRDLFCHVPSGYGMSSPPRCSPSAMTCPS 194
PPT G + SH P V L H P G PP SP A TC S
Sbjct: 721 PPTGEPGFPVVHQDLSHIQQPAAVVAALSSHKPPVRG--EPPAASPEASTCQS 771
>AC109828-1|AAY24049.1| 534|Homo sapiens unknown protein.
Length = 534
Score = 30.7 bits (66), Expect = 2.0
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +2
Query: 8 EMIPASRFYHRTAHHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLW--NELPS-TVFPER 178
E IP + +H + + PY + +S QR LP L+ N S T PER
Sbjct: 329 EWIPLAWKWHLLSELEAA--PYLPQEEKSPLFSVQREGLPEDGTLYRINRFSSITAHPER 386
Query: 179 YDMSFFKRG-LW 211
+D+SFF G LW
Sbjct: 387 WDVSFFTGGPLW 398
>AB014525-1|BAA31600.2| 2663|Homo sapiens KIAA0625 protein protein.
Length = 2663
Score = 30.7 bits (66), Expect = 2.0
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Frame = +3
Query: 42 PPT--TGVEFIRTTWSHCGHPQCVSRDLFCHVPSGYGMSSPPRCSPSAMTCPS 194
PPT G + SH P V L H P G PP SP A TC S
Sbjct: 2556 PPTGEPGFPVVHQDLSHIQQPAAVVAALSSHKPPVRG--EPPAASPEASTCQS 2606
>U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein.
Length = 4861
Score = 30.3 bits (65), Expect = 2.6
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +2
Query: 65 HPYYLEPLRSSTVRFQRSFLPRTI-RLWNELPSTVFPERYDMSFFKRGLWRVLSGRQRLG 241
H Y L ST RSFL R ++ +E+P FP + F + ++LS L
Sbjct: 746 HRPYCVDLEESTFSHLRSFLERYCDKINSEIPPLPFPSSREHHSFLKLCLKLLSNHLALA 805
Query: 242 SAPGIA 259
A G+A
Sbjct: 806 LAGGVA 811
>AF348833-1|AAK27705.1| 163|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 163
Score = 29.9 bits (64), Expect = 3.5
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -3
Query: 179 SARGTPWRGAHSIAGWYVAKKISGNAL-WMTAVAPGSTDELYS 54
S +G+ +R GW +++ G L WMT + PG +D YS
Sbjct: 40 SCKGSGYRFTTYWIGW--VRQVPGKGLEWMTIIYPGDSDTRYS 80
>AF348831-1|AAK27703.1| 163|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 163
Score = 29.9 bits (64), Expect = 3.5
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -3
Query: 179 SARGTPWRGAHSIAGWYVAKKISGNAL-WMTAVAPGSTDELYS 54
S +G+ +R GW +++ G L WMT + PG +D YS
Sbjct: 40 SCKGSGYRFTTYWIGW--VRQVPGKGLEWMTIIYPGDSDTRYS 80
>AY971122-1|AAY18543.1| 130|Homo sapiens immunoglobulin alpha heavy
chain variable region protein.
Length = 130
Score = 29.1 bits (62), Expect = 6.1
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -3
Query: 179 SARGTPWRGAHSIAGWYVAKKISGNAL-WMTAVAPGSTDELYS 54
S +G+ + S GW +++SG L WM + PG +D YS
Sbjct: 21 SCKGSGYSFTSSWIGW--VRQMSGKGLEWMGIIYPGDSDTTYS 61
>X02647-1|CAA26485.1| 351|Homo sapiens c-src protein.
Length = 351
Score = 28.7 bits (61), Expect = 8.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 72 TTWSHCGHPQCVSRDLFCHVPSGYGMSSPPRCSPS 176
TT +P V+R++ V GY M PP C S
Sbjct: 274 TTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES 308
>U44493-1|AAD00040.1| 98|Homo sapiens IgE heavy chain protein.
Length = 98
Score = 28.7 bits (61), Expect = 8.1
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -3
Query: 179 SARGTPWRGAHSIAGWYVAKKISGNAL-WMTAVAPGSTDELYS 54
S +G+ +R ++ GW +++ G L WM + PG +D YS
Sbjct: 21 SCKGSGYRFTNNWIGW--VRQMPGKGLEWMGIIYPGDSDTRYS 61
>L28821-1|AAA92022.1| 796|Homo sapiens alpha mannosidase II isozyme
protein.
Length = 796
Score = 28.7 bits (61), Expect = 8.1
Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = +3
Query: 48 TTGVEFI-RTTWSHCGHPQCVSRDLFCHVPSGYGMSSPPRCSPSAMTC 188
T +EF+ R TW S D+FCH+ Y P C P C
Sbjct: 325 THSLEFMWRQTWDSDS-----STDIFCHMMPFYSYDVPHTCGPDPKIC 367
>K03218-1|AAA60584.1| 536|Homo sapiens SRC protein.
Length = 536
Score = 28.7 bits (61), Expect = 8.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 72 TTWSHCGHPQCVSRDLFCHVPSGYGMSSPPRCSPS 176
TT +P V+R++ V GY M PP C S
Sbjct: 459 TTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES 493
>D55649-1|BAA09510.1| 1139|Homo sapiens alpha mannosidase II isozyme
protein.
Length = 1139
Score = 28.7 bits (61), Expect = 8.1
Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = +3
Query: 48 TTGVEFI-RTTWSHCGHPQCVSRDLFCHVPSGYGMSSPPRCSPSAMTC 188
T +EF+ R TW S D+FCH+ Y P C P C
Sbjct: 325 THSLEFMWRQTWDSDS-----STDIFCHMMPFYSYDVPHTCGPDPKIC 367
>BC051270-1|AAH51270.2| 536|Homo sapiens v-src sarcoma
(Schmidt-Ruppin A-2) viral oncogene homolog (avian)
protein.
Length = 536
Score = 28.7 bits (61), Expect = 8.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 72 TTWSHCGHPQCVSRDLFCHVPSGYGMSSPPRCSPS 176
TT +P V+R++ V GY M PP C S
Sbjct: 459 TTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES 493
>BC031227-1|AAH31227.2| 452|Homo sapiens WDR88 protein protein.
Length = 452
Score = 28.7 bits (61), Expect = 8.1
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +3
Query: 138 GYGMSSPPRCSPSA 179
G+ M+SPPRCSP+A
Sbjct: 24 GFEMASPPRCSPTA 37
>BC011566-1|AAH11566.1| 536|Homo sapiens SRC protein protein.
Length = 536
Score = 28.7 bits (61), Expect = 8.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 72 TTWSHCGHPQCVSRDLFCHVPSGYGMSSPPRCSPS 176
TT +P V+R++ V GY M PP C S
Sbjct: 459 TTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES 493
>AL133293-2|CAC34523.1| 536|Homo sapiens v-src sarcoma
(Schmidt-Ruppin A-2) viral oncogenem exchanger), member
2 protein.
Length = 536
Score = 28.7 bits (61), Expect = 8.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 72 TTWSHCGHPQCVSRDLFCHVPSGYGMSSPPRCSPS 176
TT +P V+R++ V GY M PP C S
Sbjct: 459 TTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES 493
>AL133293-1|CAC10573.1| 542|Homo sapiens v-src sarcoma
(Schmidt-Ruppin A-2) viral oncogenem exchanger), member
2 protein.
Length = 542
Score = 28.7 bits (61), Expect = 8.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 72 TTWSHCGHPQCVSRDLFCHVPSGYGMSSPPRCSPS 176
TT +P V+R++ V GY M PP C S
Sbjct: 465 TTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES 499
>AK024281-1|BAB14871.1| 251|Homo sapiens protein ( Homo sapiens
cDNA FLJ14219 fis, clone NT2RP3003800, highly similar to
Rattus norvegicus tyrosine protein kinase pp60-c-src
mRNA. ).
Length = 251
Score = 28.7 bits (61), Expect = 8.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 72 TTWSHCGHPQCVSRDLFCHVPSGYGMSSPPRCSPS 176
TT +P V+R++ V GY M PP C S
Sbjct: 174 TTKGRVPYPGMVNREVLDQVERGYRMPCPPECPES 208
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,123,111
Number of Sequences: 237096
Number of extensions: 1697452
Number of successful extensions: 4652
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4651
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3087725076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -