Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2163
         (415 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92831-3|CAC70085.1|  276|Caenorhabditis elegans Hypothetical pr...    32   0.14 
U53340-3|AAA96208.1|  578|Caenorhabditis elegans Hypothetical pr...    28   3.1  
U41545-7|AAK39136.1|  687|Caenorhabditis elegans Hypothetical pr...    28   3.1  
U64835-5|AAG24196.1|  592|Caenorhabditis elegans Hypothetical pr...    27   4.1  
Z69661-5|CAA93495.2|  346|Caenorhabditis elegans Hypothetical pr...    27   5.4  
Z92813-2|CAB07284.1|  353|Caenorhabditis elegans Hypothetical pr...    27   7.1  
Z78012-8|CAB01418.2|  945|Caenorhabditis elegans Hypothetical pr...    27   7.1  
Z75953-6|CAB00103.2|  945|Caenorhabditis elegans Hypothetical pr...    27   7.1  
AY275181-1|AAP32289.1|  945|Caenorhabditis elegans soluble guany...    27   7.1  
AF099925-2|AAC69505.1|  265|Caenorhabditis elegans Hypothetical ...    27   7.1  
AF039039-3|AAB94175.3|  161|Caenorhabditis elegans Hypothetical ...    26   9.4  
AC024841-2|AAK68540.1|  300|Caenorhabditis elegans Hypothetical ...    26   9.4  
AC024841-1|AAK68541.1|  300|Caenorhabditis elegans Hypothetical ...    26   9.4  
AC024826-8|AAF60795.2|  580|Caenorhabditis elegans Hypothetical ...    26   9.4  

>Z92831-3|CAC70085.1|  276|Caenorhabditis elegans Hypothetical
           protein F22G12.6 protein.
          Length = 276

 Score = 32.3 bits (70), Expect = 0.14
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = -2

Query: 279 YRCPWTSAMPGAEPSRCLPLNT--LHKPRLKKDMS*RSGNTVEGSSFHSRMVRGKKDLWK 106
           Y    +S+ P + PSR L L +  L KPR        +GN+++    H  ++  + D WK
Sbjct: 33  YELECSSSTPDSFPSRLLSLTSSLLEKPRFSDVTFKFAGNSLKSVPAHKYVLAARTDFWK 92


>U53340-3|AAA96208.1|  578|Caenorhabditis elegans Hypothetical
           protein F02E8.5 protein.
          Length = 578

 Score = 27.9 bits (59), Expect = 3.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 78  WSHCGHPQCVSRDLFCH 128
           WS C HP CV+  +F H
Sbjct: 12  WSRCVHPSCVAWVIFIH 28


>U41545-7|AAK39136.1|  687|Caenorhabditis elegans Hypothetical
           protein C02F12.8 protein.
          Length = 687

 Score = 27.9 bits (59), Expect = 3.1
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 93  HPQCVSRDLFCHVPSGYGMSSPPRCSPSAMT 185
           HPQ V++ +  HVP G    +PP+  P+  T
Sbjct: 162 HPQIVNQPMHPHVPVGSQNYNPPQFVPAPPT 192


>U64835-5|AAG24196.1|  592|Caenorhabditis elegans Hypothetical
           protein T09D3.3 protein.
          Length = 592

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 17/63 (26%), Positives = 23/63 (36%)
 Frame = +3

Query: 21  HLVFTIAPPTTGVEFIRTTWSHCGHPQCVSRDLFCHVPSGYGMSSPPRCSPSAMTCPSSN 200
           H +  +  P    +       HC   QCV+R  + H    Y     P C P  M  PS +
Sbjct: 264 HPLVLVVHPAPQAQCSPACQPHCSQ-QCVARLQYMHESQFYNHILEPSCRPDCM--PSCH 320

Query: 201 EAC 209
             C
Sbjct: 321 VDC 323


>Z69661-5|CAA93495.2|  346|Caenorhabditis elegans Hypothetical
           protein F48F7.7 protein.
          Length = 346

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -1

Query: 358 QLYISSIFFFIALVGRRAYGPPDGEWLPLPMDFSNARGRA 239
           Q++   I      + +  Y P  GE+LP+ +D  NA  RA
Sbjct: 177 QIFKKGIVTITVTIPKAGYAP--GEYLPITIDIDNASKRA 214


>Z92813-2|CAB07284.1|  353|Caenorhabditis elegans Hypothetical
           protein T28A8.2 protein.
          Length = 353

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -3

Query: 158 RGAHSIAGWYVAKKISGNALWMTAVAPGSTDELYSGG 48
           + AHS  GW++     GN ++   +  G+ D +Y  G
Sbjct: 265 KAAHSTFGWWMGYLSKGNQVYYADIR-GTNDSVYKTG 300


>Z78012-8|CAB01418.2|  945|Caenorhabditis elegans Hypothetical
           protein F57F5.2 protein.
          Length = 945

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 195 KKDMS*RSGNTVEGSSFHSRMVRGKKD 115
           +K  S  +G++V  SS HS  +R KKD
Sbjct: 893 EKKRSSMAGSSVTSSSAHSHSIRSKKD 919


>Z75953-6|CAB00103.2|  945|Caenorhabditis elegans Hypothetical
           protein F57F5.2 protein.
          Length = 945

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 195 KKDMS*RSGNTVEGSSFHSRMVRGKKD 115
           +K  S  +G++V  SS HS  +R KKD
Sbjct: 893 EKKRSSMAGSSVTSSSAHSHSIRSKKD 919


>AY275181-1|AAP32289.1|  945|Caenorhabditis elegans soluble guanylyl
           cyclase GCY-33 protein.
          Length = 945

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 195 KKDMS*RSGNTVEGSSFHSRMVRGKKD 115
           +K  S  +G++V  SS HS  +R KKD
Sbjct: 893 EKKRSSMAGSSVTSSSAHSHSIRSKKD 919


>AF099925-2|AAC69505.1|  265|Caenorhabditis elegans Hypothetical
           protein K01A2.5 protein.
          Length = 265

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = +3

Query: 132 PSGYGMSSPPRCSPSAMTCPSSNEAC 209
           P GYG S PP        C   +E C
Sbjct: 64  PPGYGTSRPPERKQEVQRCMKDSEYC 89


>AF039039-3|AAB94175.3|  161|Caenorhabditis elegans Hypothetical
           protein T08B1.4 protein.
          Length = 161

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +2

Query: 113 RSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRV 217
           R FL   + LW E+   +   R+ +SFFK+ L+R+
Sbjct: 123 RYFLNAHLVLWPEIEKVITNPRWAVSFFKK-LFRI 156


>AC024841-2|AAK68540.1|  300|Caenorhabditis elegans Hypothetical
           protein Y59H11AM.2 protein.
          Length = 300

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 116 ISGNALWMTAVAPGSTDELYSGG 48
           +S +A+W+ A   G   +LY+GG
Sbjct: 262 LSASAIWLAAARSGIVAKLYNGG 284


>AC024841-1|AAK68541.1|  300|Caenorhabditis elegans Hypothetical
           protein Y59H11AM.3 protein.
          Length = 300

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 116 ISGNALWMTAVAPGSTDELYSGG 48
           +S +A+W+ A   G   +LY+GG
Sbjct: 262 LSASAIWLAAARSGIVAKLYNGG 284


>AC024826-8|AAF60795.2|  580|Caenorhabditis elegans Hypothetical
           protein Y55F3AM.3a protein.
          Length = 580

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 13/37 (35%), Positives = 15/37 (40%)
 Frame = -2

Query: 312 DEHTAHLMVSGYRCPWTSAMPGAEPSRCLPLNTLHKP 202
           D  T      G R P  S +PG E    +P N  H P
Sbjct: 118 DRRTPPRRSPGRRSPPRSRLPGPERRDVMPFNPRHSP 154


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,734,273
Number of Sequences: 27780
Number of extensions: 241589
Number of successful extensions: 638
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)