Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2162
(433 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC091526-1|AAH91526.2| 149|Homo sapiens SOBP protein protein. 56 4e-08
AK090879-1|BAC03537.1| 232|Homo sapiens protein ( Homo sapiens ... 56 4e-08
L02320-1|AAA36541.1| 583|Homo sapiens radixin protein. 31 1.7
BC047109-1|AAH47109.1| 583|Homo sapiens radixin protein. 31 1.7
BC014280-1|AAH14280.1| 489|Homo sapiens zinc finger protein 71 ... 29 6.8
AF269249-1|AAF88036.1| 489|Homo sapiens endothelial zinc finger... 29 6.8
AC007228-3|AAD23608.1| 538|Homo sapiens BC37295_2 (partial) pro... 29 6.8
Y09008-1|CAA70211.1| 313|Homo sapiens uracil-DNA glycosylase pr... 29 9.0
X89398-2|CAA61579.1| 304|Homo sapiens uracil-DNA-glycosylase, U... 29 9.0
X89398-1|CAA61578.1| 313|Homo sapiens uracil-DNA-glycosylase, U... 29 9.0
X15653-1|CAA33679.1| 304|Homo sapiens protein ( Human cDNA for ... 29 9.0
CR541673-1|CAG46474.1| 304|Homo sapiens UNG protein. 29 9.0
BC050634-1|AAH50634.1| 304|Homo sapiens uracil-DNA glycosylase ... 29 9.0
BC015205-1|AAH15205.1| 304|Homo sapiens uracil-DNA glycosylase ... 29 9.0
AF526277-1|AAM77695.1| 313|Homo sapiens uracil-DNA glycosylase ... 29 9.0
>BC091526-1|AAH91526.2| 149|Homo sapiens SOBP protein protein.
Length = 149
Score = 56.4 bits (130), Expect = 4e-08
Identities = 23/42 (54%), Positives = 32/42 (76%)
Frame = +3
Query: 153 NSSTKTPPLGVKKENEEEIKDFAETAMNELLGWYGYERLELR 278
N ++ P VK+E EE+K+FAE MNELLGWYGY+++EL+
Sbjct: 13 NKRSRKPAHPVKREINEEMKNFAENTMNELLGWYGYDKVELK 54
>AK090879-1|BAC03537.1| 232|Homo sapiens protein ( Homo sapiens
cDNA FLJ33560 fis, clone BRAMY2009557. ).
Length = 232
Score = 56.4 bits (130), Expect = 4e-08
Identities = 23/42 (54%), Positives = 32/42 (76%)
Frame = +3
Query: 153 NSSTKTPPLGVKKENEEEIKDFAETAMNELLGWYGYERLELR 278
N ++ P VK+E EE+K+FAE MNELLGWYGY+++EL+
Sbjct: 13 NKRSRKPAHPVKREINEEMKNFAENTMNELLGWYGYDKVELK 54
>L02320-1|AAA36541.1| 583|Homo sapiens radixin protein.
Length = 583
Score = 31.1 bits (67), Expect = 1.7
Identities = 21/87 (24%), Positives = 39/87 (44%)
Frame = +3
Query: 144 MDNNSSTKTPPLGVKKENEEEIKDFAETAMNELLGWYGYERLELRRWAASRAKDASSPEQ 323
M+ + + +KE EE+ + E ERLE R AA AK A + +
Sbjct: 348 MERLKQIEEQTIKAQKELEEQTRKALELDQERKRAKEEAERLEKERRAAEEAKSAIAKQA 407
Query: 324 SNEQKNKDECSWCNKGITSESGALQHA 404
+++ KN+++ + T++ L+ A
Sbjct: 408 ADQMKNQEQLAAELAEFTAKIALLEEA 434
>BC047109-1|AAH47109.1| 583|Homo sapiens radixin protein.
Length = 583
Score = 31.1 bits (67), Expect = 1.7
Identities = 21/87 (24%), Positives = 39/87 (44%)
Frame = +3
Query: 144 MDNNSSTKTPPLGVKKENEEEIKDFAETAMNELLGWYGYERLELRRWAASRAKDASSPEQ 323
M+ + + +KE EE+ + E ERLE R AA AK A + +
Sbjct: 348 MERLKQIEEQTIKAQKELEEQTRKALELDQERKRAKEEAERLEKERRAAEEAKSAIAKQA 407
Query: 324 SNEQKNKDECSWCNKGITSESGALQHA 404
+++ KN+++ + T++ L+ A
Sbjct: 408 ADQMKNQEQLAAELAEFTAKIALLEEA 434
>BC014280-1|AAH14280.1| 489|Homo sapiens zinc finger protein 71
protein.
Length = 489
Score = 29.1 bits (62), Expect = 6.8
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +3
Query: 291 SRAKDASSPEQSNEQKNKDECSWCNKGITSESGALQH 401
S D S P E+K +CS C K + S ++H
Sbjct: 112 SSTSDLSKPPMPCEEKKTYDCSECGKAFSRSSSLIKH 148
>AF269249-1|AAF88036.1| 489|Homo sapiens endothelial zinc finger
protein induced by tumor necrosis factor alpha protein.
Length = 489
Score = 29.1 bits (62), Expect = 6.8
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +3
Query: 291 SRAKDASSPEQSNEQKNKDECSWCNKGITSESGALQH 401
S D S P E+K +CS C K + S ++H
Sbjct: 112 SSTSDLSKPPMPCEEKKTYDCSECGKAFSRSSSLIKH 148
>AC007228-3|AAD23608.1| 538|Homo sapiens BC37295_2 (partial)
protein.
Length = 538
Score = 29.1 bits (62), Expect = 6.8
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +3
Query: 291 SRAKDASSPEQSNEQKNKDECSWCNKGITSESGALQH 401
S D S P E+K +CS C K + S ++H
Sbjct: 161 SSTSDLSKPPMPCEEKKTYDCSECGKAFSRSSSLIKH 197
>Y09008-1|CAA70211.1| 313|Homo sapiens uracil-DNA glycosylase
protein.
Length = 313
Score = 28.7 bits (61), Expect = 9.0
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +3
Query: 183 VKKENEEEIKDFAETAMNELLGWYGYERLELRRWAASRAKDASS-PEQSNEQKNKDECSW 359
+ KE +I+DF +L GW L L RA A+S E+ EQ SW
Sbjct: 182 IYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSW 241
Query: 360 CNK 368
N+
Sbjct: 242 LNQ 244
>X89398-2|CAA61579.1| 304|Homo sapiens uracil-DNA-glycosylase, UNG1
protein.
Length = 304
Score = 28.7 bits (61), Expect = 9.0
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +3
Query: 183 VKKENEEEIKDFAETAMNELLGWYGYERLELRRWAASRAKDASS-PEQSNEQKNKDECSW 359
+ KE +I+DF +L GW L L RA A+S E+ EQ SW
Sbjct: 173 IYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSW 232
Query: 360 CNK 368
N+
Sbjct: 233 LNQ 235
>X89398-1|CAA61578.1| 313|Homo sapiens uracil-DNA-glycosylase, UNG2
protein.
Length = 313
Score = 28.7 bits (61), Expect = 9.0
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +3
Query: 183 VKKENEEEIKDFAETAMNELLGWYGYERLELRRWAASRAKDASS-PEQSNEQKNKDECSW 359
+ KE +I+DF +L GW L L RA A+S E+ EQ SW
Sbjct: 182 IYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSW 241
Query: 360 CNK 368
N+
Sbjct: 242 LNQ 244
>X15653-1|CAA33679.1| 304|Homo sapiens protein ( Human cDNA for
uracil-DNA glycosylase. ).
Length = 304
Score = 28.7 bits (61), Expect = 9.0
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +3
Query: 183 VKKENEEEIKDFAETAMNELLGWYGYERLELRRWAASRAKDASS-PEQSNEQKNKDECSW 359
+ KE +I+DF +L GW L L RA A+S E+ EQ SW
Sbjct: 173 IYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSW 232
Query: 360 CNK 368
N+
Sbjct: 233 LNQ 235
>CR541673-1|CAG46474.1| 304|Homo sapiens UNG protein.
Length = 304
Score = 28.7 bits (61), Expect = 9.0
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +3
Query: 183 VKKENEEEIKDFAETAMNELLGWYGYERLELRRWAASRAKDASS-PEQSNEQKNKDECSW 359
+ KE +I+DF +L GW L L RA A+S E+ EQ SW
Sbjct: 173 IYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSW 232
Query: 360 CNK 368
N+
Sbjct: 233 LNQ 235
>BC050634-1|AAH50634.1| 304|Homo sapiens uracil-DNA glycosylase
protein.
Length = 304
Score = 28.7 bits (61), Expect = 9.0
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +3
Query: 183 VKKENEEEIKDFAETAMNELLGWYGYERLELRRWAASRAKDASS-PEQSNEQKNKDECSW 359
+ KE +I+DF +L GW L L RA A+S E+ EQ SW
Sbjct: 173 IYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSW 232
Query: 360 CNK 368
N+
Sbjct: 233 LNQ 235
>BC015205-1|AAH15205.1| 304|Homo sapiens uracil-DNA glycosylase
protein.
Length = 304
Score = 28.7 bits (61), Expect = 9.0
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +3
Query: 183 VKKENEEEIKDFAETAMNELLGWYGYERLELRRWAASRAKDASS-PEQSNEQKNKDECSW 359
+ KE +I+DF +L GW L L RA A+S E+ EQ SW
Sbjct: 173 IYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSW 232
Query: 360 CNK 368
N+
Sbjct: 233 LNQ 235
>AF526277-1|AAM77695.1| 313|Homo sapiens uracil-DNA glycosylase
protein.
Length = 313
Score = 28.7 bits (61), Expect = 9.0
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +3
Query: 183 VKKENEEEIKDFAETAMNELLGWYGYERLELRRWAASRAKDASS-PEQSNEQKNKDECSW 359
+ KE +I+DF +L GW L L RA A+S E+ EQ SW
Sbjct: 182 IYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSW 241
Query: 360 CNK 368
N+
Sbjct: 242 LNQ 244
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,875,113
Number of Sequences: 237096
Number of extensions: 896828
Number of successful extensions: 7416
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7415
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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