Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2161
(398 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 32 0.038
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 32 0.038
SPBC1289.01c |chr4|cfh3, SPBC1539.11c|chitin synthase regulatory... 28 0.61
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 1.1
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 1.4
SPBC1718.07c |zfs1|moc4|transcription factor Zfs1 |Schizosacchar... 26 1.9
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 2.5
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 25 3.3
SPAP7G5.03 |||conjugation protein |Schizosaccharomyces pombe|chr... 25 5.7
SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase Ubp12|Schizo... 25 5.7
SPBC29A10.06c |||conserved fungal protein|Schizosaccharomyces po... 25 5.7
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 25 5.7
SPAC2F3.08 |sut1||alpha-glucoside transporter |Schizosaccharomyc... 24 7.6
SPAC11E3.13c |||1,3-beta-glucanosyltransferase |Schizosaccharomy... 24 7.6
SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces p... 24 7.6
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 24 10.0
SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|ch... 24 10.0
SPBPB2B2.01 |||amino acid permease, unknown 12|Schizosaccharomyc... 24 10.0
SPCC1393.07c |mug4||sequence orphan|Schizosaccharomyces pombe|ch... 24 10.0
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 24 10.0
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c... 24 10.0
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 31.9 bits (69), Expect = 0.038
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = -3
Query: 369 SFMTESLKGTGQSSKTMVIANGPSVLSSGITLTIHNTTCSHPSSLSAITCSLTSRTGDSS 190
SF + + SS + +++ S SS TLT +++ S P+S S+ + SL+S SS
Sbjct: 354 SFSSTTSSSKSSSSFSSTVSSSSSTSSS--TLTSSSSSSSRPASSSSHSSSLSSHKSSSS 411
Query: 189 SPS 181
S S
Sbjct: 412 SKS 414
Score = 27.5 bits (58), Expect = 0.81
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = -3
Query: 381 NSFVSFMTESLKGTGQSSKTMVIANGPSVLSSGITLTIHNTTCSHPSSLSAITCSLTSRT 202
++F S S + SS ++V ++ SS TLT + + S S S+ + S +S
Sbjct: 195 STFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSL 254
Query: 201 GDSSSPSIA 175
SSS S A
Sbjct: 255 SSSSSSSTA 263
Score = 24.2 bits (50), Expect = 7.6
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = -3
Query: 381 NSFVSFMTESLKGTGQSSKTMVIANGPSVLSSGITLTIHNTTCSHPSSLSAITCSLTSRT 202
+S++S + + SS + S+ +S I T +++ S SSLS+ + S T+ +
Sbjct: 207 SSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPST-SSSSSSTSSSLSSSSSSSTASS 265
Query: 201 GDSSSPSIA 175
SSS I+
Sbjct: 266 SSSSSSIIS 274
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 31.9 bits (69), Expect = 0.038
Identities = 25/94 (26%), Positives = 44/94 (46%)
Frame = -3
Query: 387 IRNSFVSFMTESLKGTGQSSKTMVIANGPSVLSSGITLTIHNTTCSHPSSLSAITCSLTS 208
+ +S VS T S + SS + PS SS + + +++ S SS S+ + S +S
Sbjct: 127 VSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 186
Query: 207 RTGDSSSPSIAIIFFRKRMRINRSPIPLNYSTTN 106
+ SSS S + + S +P+ ST++
Sbjct: 187 SSSSSSSSSSS----SSSSSSSSSSVPITSSTSS 216
Score = 27.5 bits (58), Expect = 0.81
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -3
Query: 300 SVLSSGITLTIHNTTCSHPSSLSAITCSLTSRTGDSSSPS 181
+V SS ++ T +++ S PSS S T + S + SSS S
Sbjct: 126 TVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSS 165
>SPBC1289.01c |chr4|cfh3, SPBC1539.11c|chitin synthase regulatory
factor |Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 27.9 bits (59), Expect = 0.61
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Frame = -3
Query: 360 TESLKGTGQSSKTMVIANGPSVLSSGITLTIHNTTCSHPSS----LSAITCSLTSRTGDS 193
T+SL + + K + P+V SS I LTI T S + L I S S T
Sbjct: 88 TQSLSASVTNMKKENFYSRPNVSSSSILLTIKRATSSQETKRDRPLPNIRNSAPSATRSH 147
Query: 192 SSPSIAIIFFR 160
S+P +A + R
Sbjct: 148 STPCVAPGYLR 158
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.1 bits (57), Expect = 1.1
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = -3
Query: 333 SSKTMVIANGPSVLSSGITLTIHNTTCS-HPSSLSAITCSLTSRTGDSSSPSI 178
SS ++++++ P SS + ++ S + +SLS IT S S T SSS +I
Sbjct: 680 SSSSLIVSSSPVASSSSSPIPSSSSLVSTYSASLSNITHSSLSLTAMSSSSAI 732
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 26.6 bits (56), Expect = 1.4
Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = -3
Query: 354 SLKGTGQSSKTMVIANGPSVLSSGITLTIHNTTCSHP-SSLSAITCSLTSRTGDSSSPSI 178
S T SS + AN + S T +NT+ P SS+S+ S + T +S+ S
Sbjct: 494 STSATSASSTPLTSANSTTSTSVSSTAPSYNTSSVLPTSSVSSTPLSSANSTTATSASST 553
Query: 177 AIIFFRKRMRINRSPIPLNYST 112
+ + S P ST
Sbjct: 554 PLTSVNSTTATSASSTPFGNST 575
Score = 25.4 bits (53), Expect = 3.3
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = -3
Query: 354 SLKGTGQSSKTMVIANGPSVLSSGITLTIHNTTCSHP-SSLSAITCSLTSRTGDSSSPSI 178
S T SS + AN + S T +NT+ P SS+S+ S + T +S+ S
Sbjct: 380 STSATSASSTPLTSANSTTSTSVSSTAPSYNTSSVLPTSSVSSTPLSSANSTTATSASST 439
Query: 177 AIIFFRKRMRINRSPIPLN 121
+ + S PL+
Sbjct: 440 PLSSVNSTTATSASSTPLS 458
Score = 24.6 bits (51), Expect = 5.7
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = -3
Query: 315 IANGPSVLSSGITLTIHNTTCSHPSSLSAITCSLTSRTGDSSSPS 181
+++ P++L T +NT+ + SSL++ + + +S T SS S
Sbjct: 49 LSSVPTLLKRATTSYNYNTSSASSSSLTSSSAASSSLTSSSSLAS 93
>SPBC1718.07c |zfs1|moc4|transcription factor Zfs1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 404
Score = 26.2 bits (55), Expect = 1.9
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Frame = -3
Query: 333 SSKTMVIANGPSVLSSGITLTIHN------TTCSHPSSLSAITCSLTSRTGDSS 190
SS A PS+LSS T +H+ T +HPS +S++ SL SR+ S
Sbjct: 115 SSNPQGYAWTPSLLSSNATSYLHSGSSPHGNTSNHPSPISSLE-SLPSRSSTGS 167
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.8 bits (54), Expect = 2.5
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = -3
Query: 360 TESLKGTGQSSKTMVIANGPSVLSSGITLTIHNTTCSH----PSSLSAITCSLTSRTGDS 193
+ S T SS + ++ S+++S + + +++ SH PSS S+ S + +G S
Sbjct: 109 SSSASPTSSSSSHALSSSSSSLVASSSSSGMSSSSLSHSSSVPSSSSSYHSSSMTTSGLS 168
Query: 192 SSPSIAIIFFR 160
SS SI +R
Sbjct: 169 SSASIVSSTYR 179
Score = 25.4 bits (53), Expect = 3.3
Identities = 14/54 (25%), Positives = 31/54 (57%)
Frame = -3
Query: 333 SSKTMVIANGPSVLSSGITLTIHNTTCSHPSSLSAITCSLTSRTGDSSSPSIAI 172
SS + ++ ++ SS + + +++ + P+S S IT ++S + SSS S ++
Sbjct: 45 SSSMLSSSSATAISSSSSSSPLSSSSFTSPASSSFITSLVSSSSQQSSSSSASL 98
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 25.4 bits (53), Expect = 3.3
Identities = 20/85 (23%), Positives = 41/85 (48%)
Frame = -3
Query: 363 MTESLKGTGQSSKTMVIANGPSVLSSGITLTIHNTTCSHPSSLSAITCSLTSRTGDSSSP 184
++ SL T S+ + + PS S +L I +++ + SSL + ++TS +S
Sbjct: 566 ISSSLTATSTSTPALTHSITPSNTSYTSSL-IPSSSTDYSSSLITVCSNVTSEISSTSLA 624
Query: 183 SIAIIFFRKRMRINRSPIPLNYSTT 109
S+ +++ N+S + +TT
Sbjct: 625 SLISTLTSQQISSNKSSEFVGQTTT 649
>SPAP7G5.03 |||conjugation protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 703
Score = 24.6 bits (51), Expect = 5.7
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = -3
Query: 333 SSKTMVIANGPSVLSSGITLTIHNTTCSHPSSLSA----ITCSLTSRTGDS 193
+S +I +++ + +IHNTT S S+L+ + S+TS GD+
Sbjct: 430 NSTNQIILKNQENINNNMFGSIHNTTLSLNSTLNTFMNELNSSMTSAFGDT 480
>SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase
Ubp12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 979
Score = 24.6 bits (51), Expect = 5.7
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +2
Query: 272 VNVIPLDNTLGPLAITIVFDDCPVPFRDSV 361
V IP D L PLAI +V + D V
Sbjct: 503 VTFIPADTNLTPLAIEVVLESKAATIEDLV 532
>SPBC29A10.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 295
Score = 24.6 bits (51), Expect = 5.7
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = -2
Query: 259 DLQPSLFFVSDHVQFDEQNR*LFIAQHRYHLFQEKDAHKSKSYSTKLQYYKPDFKSLESI 80
DLQ SLF + ++ DE + Q ++ + KD KS++YS ++ K ++
Sbjct: 68 DLQ-SLFMIIENSNIDE------LKQQCFYYYLLKDWEKSETYSEQVSLPKNYQHLMDGY 120
Query: 79 YAM*FLRF 56
Y + L+F
Sbjct: 121 YYLDRLKF 128
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 24.6 bits (51), Expect = 5.7
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -3
Query: 315 IANGPSVLSSGITLTIHNTTCSHPSSLSAITCSLTSRTGDSSSPSIAI 172
IA S L+SG++ + + T S S + S + SSS S+A+
Sbjct: 403 IATSKSGLNSGVSTLLASPTSSSTFVTSLLRRSSIDGSASSSSASLAV 450
>SPAC2F3.08 |sut1||alpha-glucoside transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 553
Score = 24.2 bits (50), Expect = 7.6
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -3
Query: 291 SSGITLTIHNTTCSHPSSLSAITCSLTSRTGDSSSPSIA 175
SSG + +HN S P LS I ++ + S IA
Sbjct: 485 SSGKMIGVHNVFISAPQVLSTIIATIVFIQSEGSHRDIA 523
>SPAC11E3.13c |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 510
Score = 24.2 bits (50), Expect = 7.6
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -3
Query: 333 SSKTMVIANGPSVLSSGITLTIHNTTCSHPS-SLSAITCSLTSRTGDSSSPS 181
++ T +++ GP +S+ I I T S S S S+ S S T SSS S
Sbjct: 396 ANATALVSPGPHSVSTTINTNIVQATISQSSTSGSSSGSSSASTTASSSSVS 447
>SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 352
Score = 24.2 bits (50), Expect = 7.6
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -3
Query: 267 HNTTCSHPSSLSAITCSLTSRTGDSSSPSIAIIFFRKRMRINRSPIP 127
H S+P+ I+CS +RTGD + +I+ + K N + +P
Sbjct: 286 HQRLKSYPNVGGTISCSTFNRTGDIFAYAIS-YDWSKGYTFNNAQLP 331
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 23.8 bits (49), Expect = 10.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 270 IHNTTCSHPSSLSAITCSLTSRTGDSSSPS 181
+ T C S LS T S TS+ S+SP+
Sbjct: 146 VPETNCHKESPLSDETVSETSKNDTSNSPT 175
>SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 870
Score = 23.8 bits (49), Expect = 10.0
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -2
Query: 217 FDEQNR*LFIAQHRYHLFQEKDAHKSKSYSTKLQYYKPDFK 95
F+E +R + + RY EK+ K+ +K K DF+
Sbjct: 364 FEETSRDYYTSLSRYLSKSEKETSSDKTKESKFAAKKRDFE 404
>SPBPB2B2.01 |||amino acid permease, unknown 12|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 585
Score = 23.8 bits (49), Expect = 10.0
Identities = 11/36 (30%), Positives = 14/36 (38%)
Frame = -3
Query: 120 YSTTNLILKVLKAFMQCNF*DSHILNKCPGHXTSHR 13
Y I+ +K C F I+ C G T HR
Sbjct: 217 YGEMEFIMSTIKVVAMCGFIILGIIIDCGGVPTDHR 252
>SPCC1393.07c |mug4||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 845
Score = 23.8 bits (49), Expect = 10.0
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -3
Query: 147 INRSPIPLNYSTTNLILKVLKAFMQCNF*DSHILNKCP 34
IN S +P+ TN I K C + +NK P
Sbjct: 479 INDSWLPMKLKETNAISYYRKTCSSCKYPFQFFINKLP 516
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 23.8 bits (49), Expect = 10.0
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Frame = -3
Query: 378 SFV-SFMTESLKGTGQSSKTMVIANGPSVLSSGITLTIHNTTCSHP-SSLSAITCSLTSR 205
SF+ S S+ KT ++G + ++ + +++ P SS S T S++SR
Sbjct: 705 SFITSSSLSSIPNNSTEVKTASTSSGTEIKTASTSSGSSSSSSYTPASSTSTTTSSVSSR 764
Query: 204 TGDSSS---PSIAI 172
SSS PS AI
Sbjct: 765 QSSSSSSFTPSSAI 778
>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
3|||Manual
Length = 625
Score = 23.8 bits (49), Expect = 10.0
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = -3
Query: 333 SSKTMVIANGPSVLSSGITLTIHNTTCSHPSSLSAITCSLTSRTGDSSSPS 181
+S + A+ PS S ++H ++ + S S+ S +SR+G SSS S
Sbjct: 501 TSYSSASASYPSTSMSASLSSVHTSSATSSSKSSS---SSSSRSGSSSSSS 548
Score = 23.8 bits (49), Expect = 10.0
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = -3
Query: 369 SFMTESLKGTGQSSKTMVIANGPSVLSSGITLT---IHNTTCSHPSSLSAITCSLTSRTG 199
S + S G+ SS + + S S IT T +H + S +S A+T + S +
Sbjct: 534 SSSSSSRSGSSSSSSSRSGSTSSSGSSHTITSTSQSVHTSGSSTSTSSVAVTSTAYSSSS 593
Query: 198 DSSSPS 181
SSS S
Sbjct: 594 SSSSSS 599
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,633,375
Number of Sequences: 5004
Number of extensions: 32179
Number of successful extensions: 118
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 134126124
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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