Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2158
         (737 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    26   0.37 
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    24   1.1  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   1.9  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   1.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.6  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   4.5  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   5.9  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   5.9  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   7.9  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   7.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   7.9  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -3

Query: 663 RFEGWGSRCNYTEILKLISQGGWRI 589
           ++ G      Y EI++L  +GGW++
Sbjct: 289 KYTGEAGMLGYNEIVELQKEGGWKV 313


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +1

Query: 376 EFAVCVLSTNYRWVLSIYIFTDKPLS 453
           E A  +L  N +WV SI  FT  PLS
Sbjct: 201 ESAAQLLFMNVQWVRSIPAFTCLPLS 226


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 556 WLLEPMDIYNVNTPPTLRYK 615
           WL  P  + N  TP +LR+K
Sbjct: 7   WLTPPHSLGNTVTPVSLRFK 26


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 376 EFAVCVLSTNYRWVLSIYIFTDKPLS 453
           E A  ++  N +WV SI  FT  PLS
Sbjct: 201 ESAAQLIFMNVQWVRSIPAFTCLPLS 226


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 621 RSQYSYNGCPTLQTETPLVLH 683
           R  YS NG  +   E P++LH
Sbjct: 803 RVDYSMNGTYSADDEVPMLLH 823


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -3

Query: 549 TRWAVSSSTHLSNKKLNVIFIYK 481
           TR + SSSTH S+++ +  F+ K
Sbjct: 384 TRKSTSSSTHTSSQQTSDSFLSK 406


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 401 LTIGGSFQFTFLQTSRFL 454
           L +GG+ QFT ++   FL
Sbjct: 305 LRVGGNNQFTMMEEQAFL 322


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 669 AFRFEGWGSRCNYTEILKLISQGGW 595
           A R+ G      Y EI++  + GGW
Sbjct: 291 AGRYTGERGMMGYNEIVEAQNAGGW 315


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 194 LIIQFKIFH*YKPYTVLIIYRWLLR 268
           +II    F  + PY V+ I+ WL R
Sbjct: 278 IIIVLVFFVCWTPYYVMCIWYWLDR 302


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 194 LIIQFKIFH*YKPYTVLIIYRWLLR 268
           +II    F  + PY V+ I+ WL R
Sbjct: 278 IIIVLVFFVCWTPYYVMCIWYWLDR 302


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = -2

Query: 190 FIDYWTCSCP 161
           ++D +TC+CP
Sbjct: 3   YVDSYTCTCP 12


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,074
Number of Sequences: 336
Number of extensions: 3826
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)