Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2157
(696 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0614 - 4545306-4545833 32 0.50
07_03_0106 - 13460882-13462086,13463452-13463629 30 2.0
09_06_0006 + 20149326-20149646,20149750-20149824 29 2.7
09_02_0543 + 10427321-10428315,10428440-10429154 29 2.7
04_04_1694 - 35419278-35419565,35419744-35419861,35420404-354204... 29 2.7
02_01_0163 + 1135592-1135623,1135718-1135816,1135904-1135960,113... 29 2.7
01_01_0797 - 6198401-6199114 29 2.7
10_08_0236 + 16078162-16078731 29 3.5
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 29 3.5
05_06_0052 + 25199253-25199304,25199676-25199949,25200709-25201069 29 3.5
02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317 29 4.7
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 29 4.7
10_08_0630 - 19410852-19411235,19411370-19412257,19412440-194129... 28 6.2
07_03_0873 + 22194172-22195434,22195534-22195670,22197531-221976... 28 6.2
03_06_0297 - 32924162-32924605 28 6.2
03_05_0402 - 23851755-23851802,23852012-23852022,23853055-23853427 28 6.2
03_04_0024 + 16556026-16556588,16556757-16556868 28 6.2
01_06_1061 - 34169469-34169624,34170837-34170938,34171029-341711... 28 6.2
12_01_0840 - 7847239-7847531,7847576-7847675,7848312-7848388,784... 28 8.1
11_04_0364 - 16791774-16792490,16792545-16793561,16793856-167939... 28 8.1
09_05_0008 + 20042390-20042845,20043323-20043457,20043539-200436... 28 8.1
06_03_0176 - 17575155-17575761,17575935-17575972 28 8.1
05_05_0098 + 22373384-22373522,22373566-22373772,22373879-223739... 28 8.1
03_05_0329 - 23211636-23211857,23211946-23212079,23212170-232124... 28 8.1
>07_01_0614 - 4545306-4545833
Length = 175
Score = 31.9 bits (69), Expect = 0.50
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -2
Query: 419 CVAPSPLVVQAYPTPSPGAVFLIPAHAHALRPEPGP 312
C+ P PL+ +A+P+P A L+P ALRP P P
Sbjct: 9 CLRPPPLLRRAFPSP---ATRLLPPQTLALRPLPLP 41
>07_03_0106 - 13460882-13462086,13463452-13463629
Length = 460
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 262 PYRRQAAGNGKANGNQTGPGSGRSACAC 345
P RR+A+ G N+ G G+G++ AC
Sbjct: 14 PMRREASAVGGREANEAGVGNGKAVAAC 41
>09_06_0006 + 20149326-20149646,20149750-20149824
Length = 131
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Frame = +1
Query: 262 PYRRQAAGNGKANG---NQTGPGSGRSACACAGIRNTAPGDG 378
P RR AAG G A GPG+GR AG+ P G
Sbjct: 53 PMRRGAAGGGSARAWLCGGAGPGAGRGRGGAAGVVVIPPSCG 94
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 365 PPGMELDRPVPPVVKAPRSPMIPPSAP 445
PP D P PP AP+S PP AP
Sbjct: 36 PPPPAPDMPPPPPTPAPQSSPAPPPAP 62
>04_04_1694 -
35419278-35419565,35419744-35419861,35420404-35420490,
35420909-35420931,35421647-35421843,35421964-35422159,
35422382-35422481,35423288-35423374,35424053-35424282,
35424678-35424763,35425148-35425271,35425415-35428573,
35430014-35430019
Length = 1566
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -2
Query: 410 PSPLVVQAYPTPSPGAVFLIPAHAHALRPEPGPV 309
P+ P P P + H HAL+P+P PV
Sbjct: 102 PTAAAAAPAPPPPPAPAPSLHHHLHALQPQPAPV 135
>02_01_0163 +
1135592-1135623,1135718-1135816,1135904-1135960,
1136053-1136116,1136174-1136392,1138562-1138945
Length = 284
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 365 PPGMELDRPVPPVVKAPRSPMIPPSAP 445
PP P PP V +P +P +PP P
Sbjct: 167 PPRTRQVNPAPPPVPSPSAPPLPPQPP 193
>01_01_0797 - 6198401-6199114
Length = 237
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 226 LQISALHL*KVPPYRRQAAGNGKANG-NQTGPGSGRSACACAGIRNTAPGDGV 381
L SAL V YR+ G G G N+ GPG+ + CA + A G+ V
Sbjct: 91 LDASALAALPVTAYRKNGGGGGGGEGSNRGGPGATAADCAVC-LSELADGEKV 142
>10_08_0236 + 16078162-16078731
Length = 189
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 277 AAGNGKANGNQTGPGSGRSACACAGIRNTAP 369
A+GNG NGN G+G A +G N +P
Sbjct: 159 ASGNGGGNGNGENGGNGSGAGGGSGYGNASP 189
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 365 PPGMELDRPVPPVVKAPRSPMIPPSAP 445
PP RP PP+ APR P P P
Sbjct: 241 PPHHPAPRPPPPMAAAPRQPAALPPVP 267
>05_06_0052 + 25199253-25199304,25199676-25199949,25200709-25201069
Length = 228
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +1
Query: 280 AGNGKANGNQTGPGSGRSACACAGIRNTAPGDGVG 384
AG G G TG G+G A AG T PG G
Sbjct: 141 AGTGTGVGTGTGTGAGMGTGAGAGTGITTPGSTTG 175
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 283 GNGKANGNQTGPGSGRSACACAGIRNTAPGDGVG*ACTTSGEGA 414
G G + G TG G+G + AG+ G GVG T +G GA
Sbjct: 116 GTGTSTGTGTGVGTGGTGTGGAGV-GAGTGTGVG---TGTGTGA 155
>02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317
Length = 291
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 383 PTPSPGAVFLIPAHAHALRPEPGP 312
P P+P A L+P A A RP P P
Sbjct: 138 PPPAPAAPVLVPPPAPAPRPAPAP 161
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 377 ELDRPVPPVVKAPRSPMIPPSAPRS 451
+ ++P+PP + P P +PP PRS
Sbjct: 45 QYEKPLPPEDQLPPPPPLPPPPPRS 69
>10_08_0630 -
19410852-19411235,19411370-19412257,19412440-19412941,
19413662-19414135,19414982-19415040,19415468-19415629
Length = 822
Score = 28.3 bits (60), Expect = 6.2
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2
Query: 389 PVPPVVKAPRSPMIPPSAP 445
P+PP++ AP ++PP AP
Sbjct: 407 PMPPIIAAPAITVMPPPAP 425
>07_03_0873 +
22194172-22195434,22195534-22195670,22197531-22197639,
22197739-22197865,22197952-22198012,22199332-22199722
Length = 695
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 256 VPPYRRQAAGNGKANGNQTGPGSGRSACA 342
+PP R + G G+ G G G GR+A A
Sbjct: 1 MPPRRYKGRGRGRGRGRGRGKGRGRAADA 29
>03_06_0297 - 32924162-32924605
Length = 147
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 356 GIQPPGMELDRP-VPPVVKAPRSPMIPPSAPRSL 454
G + PG + P +P V PR+P +PP P L
Sbjct: 89 GPEQPGPSIPSPPMPEVPDVPRNPDVPPPKPPEL 122
>03_05_0402 - 23851755-23851802,23852012-23852022,23853055-23853427
Length = 143
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = +3
Query: 27 APTLPRIRPTRTQQW-CRWAHGNAACPMTARSVPNPAPPVRAFLVPLLTVRAAAI 188
+P+ + P T W C WA CP A VP P P F VR AAI
Sbjct: 77 SPSEAEVVPPSTGGWSCVWA-----CPSGAEVVPRPPLPPTFFCYLFPKVRYAAI 126
>03_04_0024 + 16556026-16556588,16556757-16556868
Length = 224
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -2
Query: 422 GCVAPSPLVVQAYPTPSPGAVFLIPAHAHALRPEP 318
G VAPSPL P+PS A+F + + P P
Sbjct: 53 GLVAPSPLPDPPPPSPSVAAIFSFSSSSLIFPPPP 87
>01_06_1061 -
34169469-34169624,34170837-34170938,34171029-34171180,
34172087-34172153,34172239-34172419,34172655-34172778,
34174775-34174871,34175929-34176331,34176729-34176888,
34177412-34177486,34177714-34177892,34178224-34178303,
34178561-34179322
Length = 845
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 72 CRWAHGNAACPMTARSVPNPAP 137
CRW GNA A + P+P P
Sbjct: 204 CRWLKGNAVAAEPAAATPSPLP 225
>12_01_0840 -
7847239-7847531,7847576-7847675,7848312-7848388,
7848486-7848738
Length = 240
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +1
Query: 274 QAAGNGKANGNQTGPGSGRSACACAGIRNTAPGDGVG 384
Q GNG G+ G G G+ C G G G G
Sbjct: 157 QGGGNGSGYGSGYGSGYGQGGGVCGGSYGQGGGGGGG 193
>11_04_0364 -
16791774-16792490,16792545-16793561,16793856-16793920,
16794787-16796964,16797065-16797322,16799815-16800172
Length = 1530
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 114 SQSSGTRRFHEPIDTIAGSSSAVYAAKL 31
S++ G RRF I T+ +SS +YA K+
Sbjct: 146 SENDGERRFAPNIGTLPKTSSVIYAPKI 173
>09_05_0008 +
20042390-20042845,20043323-20043457,20043539-20043679,
20043771-20043882,20044084-20044154,20044251-20044405,
20044484-20044595,20044932-20045033,20045116-20045176,
20045251-20045422,20045512-20045608,20045692-20045786,
20045881-20046014,20046208-20046422
Length = 685
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/46 (21%), Positives = 23/46 (50%)
Frame = +1
Query: 178 LPQSQAQDRAQGSQAVLQISALHL*KVPPYRRQAAGNGKANGNQTG 315
+P ++ +D QG+Q ++ + ++PP + + G G + G
Sbjct: 604 VPSAEVEDYIQGAQNAAMVTVEEVKQLPPLQEREQSGGSRGGGRFG 649
>06_03_0176 - 17575155-17575761,17575935-17575972
Length = 214
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 133 RLQFGRSSCPS*LCALPQSQAQDRAQG 213
R+Q+GR L LPQ A+ RAQG
Sbjct: 140 RIQYGRRRLSGELVGLPQQDARVRAQG 166
>05_05_0098 +
22373384-22373522,22373566-22373772,22373879-22373953,
22374611-22374744,22375189-22375674,22375854-22376621,
22377367-22377594,22378294-22378773
Length = 838
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 125 RNAPRSHRARGVSMSPSTPLLGPRRPYTRQSW 30
R+AP S RAR S+ P PL+ P T W
Sbjct: 13 RSAPSSSRARQASLRP-LPLIFPESSATASGW 43
>03_05_0329 -
23211636-23211857,23211946-23212079,23212170-23212476,
23212760-23213113
Length = 338
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +2
Query: 89 KRRVPDDCEERSEPGASSSGVPRAPPNCARCRNHRLKIELKG 214
KR C E ++ +S + P A C + R+++EL G
Sbjct: 293 KRSSSSSCSESTDAASSYDATAASFPAAASCGSKRMRLELPG 334
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,601,216
Number of Sequences: 37544
Number of extensions: 411678
Number of successful extensions: 2637
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2594
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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