Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2155
(719 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45733| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.31
SB_8811| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.31
SB_41321| Best HMM Match : Hexapep (HMM E-Value=0.01) 32 0.54
SB_18547| Best HMM Match : Vicilin_N (HMM E-Value=1.6) 32 0.54
SB_19665| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_13090| Best HMM Match : Atrophin-1 (HMM E-Value=1.8) 30 2.2
SB_4107| Best HMM Match : M (HMM E-Value=8e-22) 30 2.2
SB_44693| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_41535| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_36411| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_23706| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 29 3.8
SB_22570| Best HMM Match : Filament (HMM E-Value=0.1) 29 3.8
SB_17752| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_25121| Best HMM Match : Hc1 (HMM E-Value=0.12) 29 5.0
SB_24734| Best HMM Match : Hexapep (HMM E-Value=2.9) 29 5.0
SB_23181| Best HMM Match : Hexapep (HMM E-Value=4.5e-09) 29 5.0
SB_23964| Best HMM Match : Hexapep (HMM E-Value=1.2e-05) 29 5.0
SB_56580| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13) 28 8.8
SB_44732| Best HMM Match : TSP_1 (HMM E-Value=0) 28 8.8
SB_17117| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
>SB_45733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 806
Score = 32.7 bits (71), Expect = 0.31
Identities = 25/117 (21%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Frame = +3
Query: 213 ESSVLGTQAPKDRLIAVLDQVEMRVERLRKDTVRIEEEKDSLLSTL----DSIKHSELLL 380
E +++G Q +L++ +Q+ +R+ERL++D +++ + + D I+ +
Sbjct: 170 EQTLMGNQ---QQLLSRREQIHVRLERLKEDLEDLQDSYEQVTKNARVMNDDIRSLRINW 226
Query: 381 DISECDKDDITRYADRILSRAMTVEVTVRTDRDH-QQEEALYQVNMYIDQLVMSVHN 548
+C ++ I + + E+ R D + ++ + Q + IDQL +VHN
Sbjct: 227 KFRQCSS---VQWVSEI--KELVSELRRRLDMEEAERRTVIQQAQLNIDQLKATVHN 278
>SB_8811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 569
Score = 32.7 bits (71), Expect = 0.31
Identities = 23/72 (31%), Positives = 37/72 (51%)
Frame = +3
Query: 144 TMEVDQFALEIAYPEGSRLPLIDESSVLGTQAPKDRLIAVLDQVEMRVERLRKDTVRIEE 323
T E Q E+A + + L+ E S L Q R I++ D + +E LR+ R+EE
Sbjct: 171 TEENQQLHNELAKVKSDQEDLVKELSNLRKQQ-FSRSISIEDGRLLEIEELREKLSRLEE 229
Query: 324 EKDSLLSTLDSI 359
EKD L ++++
Sbjct: 230 EKDFLQKMVETL 241
>SB_41321| Best HMM Match : Hexapep (HMM E-Value=0.01)
Length = 1171
Score = 31.9 bits (69), Expect = 0.54
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Frame = +3
Query: 246 DRLIAVLDQVEMRVERLRKDTVRIEEE---KDSLLSTLDSIKHSELLLDISECDKDDI 410
D+L+ +D V+ V+ + KDT+ + + KD+LL +D + +LL D+ DKD +
Sbjct: 291 DKLLDDVDVVDDDVDVVDKDTLLDDVDVVDKDTLLDDVDVVDGDKLLDDVDVVDKDTL 348
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = +3
Query: 255 IAVLDQVEMRVERLRKDTVRIEEEKDSLLSTLDSIKHSELLLDISECDKDDITRYADRIL 434
+ +LD V++ + D V + + KD+LL +D + +LL D+ DKD + D +
Sbjct: 123 VTLLDDVDVVDKDTLLDDVDVVD-KDTLLDDVDVVDGDKLLDDVDVVDKDTLLDDVDVVD 181
Query: 435 SRAMTVEVTV 464
+ +V V
Sbjct: 182 KDTLLDDVDV 191
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +3
Query: 261 VLDQVEMRVERLRKDTVRIEEEKDSLLSTLDSIKHSELLLDISECDKDDITRYADRILSR 440
+LD V++ + D V + + KD+LL +D + LL D+ + DKD + D +
Sbjct: 161 LLDDVDVVDKDTLLDDVDVVD-KDTLLDDVDVVDGDTLLDDVDDVDKDTLLDDVDVVDKD 219
Query: 441 AMTVEVTV 464
+ +V V
Sbjct: 220 TLLDDVDV 227
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +3
Query: 261 VLDQVEMRVERLRKDTVRIEEEKDSLLSTLDSIKHSELLLDISECDKDDITRYADRILSR 440
+LD V++ + D V + + KD+LL +D + LL D+ + DKD + D +
Sbjct: 336 LLDDVDVVDKDTLLDDVDVVD-KDTLLDDVDIVDGDTLLDDVDDVDKDTLLDDVDVVDKD 394
Query: 441 AMTVEVTV 464
+ +V V
Sbjct: 395 TLLDDVDV 402
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 324 EKDSLLSTLDSIKHSELLLDISECDKDDITRYADRILSRAMTVEVTVRTD 473
+KD+LL +D + LL D+ + DKD + D + + +V V D
Sbjct: 217 DKDTLLDDVDVVDGDTLLDDVDDVDKDTLLDDVDVVDKDTLLDDVDVVDD 266
>SB_18547| Best HMM Match : Vicilin_N (HMM E-Value=1.6)
Length = 203
Score = 31.9 bits (69), Expect = 0.54
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = +3
Query: 108 KKN*RFSESASQTMEVDQFALEIAYPEGSRLPLIDESSVLGTQAPKDRLIAVLDQVEMRV 287
+K+ R S Q +E ALE +GSR + SS + ++ D L+ ++ R
Sbjct: 102 EKSYRKSLETKQVLETRMAALEAQSSKGSRSRALSRSSKVSARSKNDEARLDLELLQKRQ 161
Query: 288 ERLRK-DTVRIEEEKDSLLSTLDSIKHSEL 374
E R+ + EEEK +L + K L
Sbjct: 162 ELERQLEEEEAEEEKRMMLQRAEEEKQMML 191
>SB_19665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 491
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 5/77 (6%)
Frame = -3
Query: 672 DRRGCSPGWPSQSSCRCPRWGPAETCT---RSYRSGNGNAHSLRRCARTSPADRCTCSP- 505
DR C G S SC C E C+ SG+ C T + CTC P
Sbjct: 135 DRSTCGIGTDSSHSCLCRPGFEGEKCSDIDECAVSGDSPCDKNAECNNTVGSYTCTCKPG 194
Query: 504 -DTELPPADGLGQCALS 457
+ + + +CA+S
Sbjct: 195 YTGDRKTCNDIDECAIS 211
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 30.3 bits (65), Expect = 1.6
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +3
Query: 138 SQTMEVDQFA-LEIAYPEGSRLPLIDESSVLGTQAPKDRLIAVLDQVEMRVERLRKDTVR 314
+Q M DQ A + A E RL L V TQ + + A + +E ERL+KD
Sbjct: 1130 AQAMAADQKANYQNAQREIERLQL---ELVTATQK-LNHMEARNEALEDERERLKKDNSA 1185
Query: 315 IEEEKDSLLSTLDSIKH 365
+++E SL LD++KH
Sbjct: 1186 LQKEVSSLKIQLDALKH 1202
>SB_13090| Best HMM Match : Atrophin-1 (HMM E-Value=1.8)
Length = 988
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/21 (52%), Positives = 19/21 (90%)
Frame = +3
Query: 321 EEKDSLLSTLDSIKHSELLLD 383
E +DSL+S++D+++HSE+L D
Sbjct: 575 EAQDSLVSSMDTLRHSEMLND 595
>SB_4107| Best HMM Match : M (HMM E-Value=8e-22)
Length = 2039
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +3
Query: 249 RLIAVLDQVEMRVERLRKDTVRIEEEKDSLLSTLDSIKHSELLLDISECDKDDITRYADR 428
R +A +Q + +ER VR+E++K +L +TLD I+ +L D + D DR
Sbjct: 1781 RSVAAAEQEKRELERAH---VRLEKDKKALRNTLDKIEREKLETDETNTRLRDDRERLDR 1837
>SB_44693| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +3
Query: 444 MTVEVTVRTDRDHQQEEALYQVNMYIDQLVMSVHNDAVSAHSRCQTYMNACTSQPDPNAG 623
M +++ RT + + + + +Y+DQ+ H+ +VSA + NA + P PN
Sbjct: 1 MPIDIFGRTSNSNVRTQKMAM--LYLDQMRFLRHDGSVSASAPLNMAGNAIKNLPFPNEQ 58
Query: 624 TD 629
TD
Sbjct: 59 TD 60
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +3
Query: 282 RVERLRKDTVRIEEEKDSLLSTLDSIKHSELLLDISE 392
RV+++ D +R + ++L+S ++ I+HS L + ISE
Sbjct: 1492 RVDKVIVDQLREHSKVETLVSRIERIRHSPLHISISE 1528
>SB_41535| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 247
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 324 EKDSLLSTLDSIKHSELLLDISECDKDDITRYADRILSRAMTVEVTVRTD 473
+KD+LL +D + LL D+ + DKD + D + + +V V D
Sbjct: 23 DKDTLLDNVDVVDGDTLLDDVDDVDKDTLLDDVDVVDKETLLDDVDVVED 72
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +3
Query: 255 IAVLDQVEMRVERLRKDTVRIEEEKDSLLSTLDSIKHSELLLDISECDKDDI 410
+ +LD V++ + D V + + KD+LL +D + +LL D+ DKD +
Sbjct: 176 VTLLDDVDVVDKDTLLDDVDVVD-KDTLLDDVDVVDGDKLLDDVDVVDKDTL 226
>SB_36411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 654
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -1
Query: 536 HHQLIDVHVHLIQSFLLLMVSVSA-HCHLYGHSPGQDAVRVSCDIVLITLRY 384
HH+L + H L S ++VS++ HCH + HSP + SC ++ + Y
Sbjct: 578 HHRL-NHHPALPSSPSFIIVSITILHCHHHRHSPSSPS--PSCIAIITVIHY 626
>SB_23706| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 1021
Score = 29.1 bits (62), Expect = 3.8
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Frame = +2
Query: 476 RPSAGGSSVSGEHVHRSAGDVRAQRRSECAFPLPDLYER---VHVSAGPQRGHRQEL*DG 646
RP + G RS GDVR + R+ + DL++R + PQ R+ L G
Sbjct: 557 RPRVTRARSEGGRRSRSLGDVRLRNRARSVDRVYDLWDRRYSMKRDPYPQDDMRERLYGG 616
Query: 647 HPGLHPRRSEARQE 688
+H R R E
Sbjct: 617 TRDIHLARDPPRHE 630
>SB_22570| Best HMM Match : Filament (HMM E-Value=0.1)
Length = 601
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/56 (28%), Positives = 32/56 (57%)
Frame = +3
Query: 249 RLIAVLDQVEMRVERLRKDTVRIEEEKDSLLSTLDSIKHSELLLDISECDKDDITR 416
+L + ++ ++ ++ ++ +EEEKD L + LDS +E L +S C +D + R
Sbjct: 311 QLKEIENEYSVKADQYKQHIADLEEEKDQLQNELDS--QTEELRQVSLCLEDAMKR 364
>SB_17752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 513
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/56 (28%), Positives = 32/56 (57%)
Frame = +3
Query: 249 RLIAVLDQVEMRVERLRKDTVRIEEEKDSLLSTLDSIKHSELLLDISECDKDDITR 416
+L + ++ ++ ++ ++ +EEEKD L + LDS +E L +S C +D + R
Sbjct: 2 QLKEIENEYSVKADQYKQHIADLEEEKDQLQNELDS--QTEELRQVSLCLEDAMKR 55
>SB_25121| Best HMM Match : Hc1 (HMM E-Value=0.12)
Length = 320
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 294 LRKDTVRIEEEKDSLLSTLDSIKHSELLLDISECDKDDITR 416
LRKDTV+ E+ + T+ + K + L +D + +K D+ R
Sbjct: 24 LRKDTVKAEKGNVLRIDTVKAEKGNVLRIDTVKAEKGDVLR 64
>SB_24734| Best HMM Match : Hexapep (HMM E-Value=2.9)
Length = 459
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 324 EKDSLLSTLDSIKHSELLLDISECDKDDITRYADRILSRAMTVEVTVRTD 473
+KD+LL +D + LL D+ + DKD + D + + +V V D
Sbjct: 23 DKDTLLDNVDVVDGDTLLDDVDDVDKDTLLDDVDVVDKDTLLDDVDVVED 72
>SB_23181| Best HMM Match : Hexapep (HMM E-Value=4.5e-09)
Length = 782
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 324 EKDSLLSTLDSIKHSELLLDISECDKDDITRYADRILSRAMTVEVTVRTD 473
+KD+LL +D + LL D+ + DKD + D + + +V V D
Sbjct: 23 DKDTLLDNVDVVDGDTLLDDVDDVDKDTLLDDVDVVDGDTLLDDVDVVED 72
>SB_23964| Best HMM Match : Hexapep (HMM E-Value=1.2e-05)
Length = 1482
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +3
Query: 261 VLDQVEMRVERLRKDTVRIEEEKDSLLSTLDSIKHSELLLDISECDKDDITRYADRILSR 440
+LD V++ + D V + + KD+LL +D + LL D+ + DKD + D +
Sbjct: 625 LLDDVDVVDKDTLLDDVDVVD-KDTLLDDVDIVDGDTLLDDVDDVDKDTLIDDVDVVDKD 683
Query: 441 AMTVEVTVRTD 473
+ V V D
Sbjct: 684 TLLDNVDVVED 694
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +3
Query: 261 VLDQVEMRVERLRKDTVRIEEEKDSLLSTLDSIKHSELLLDISECDKDDITRYADRILSR 440
+LD V++ + D V + + KD+LL +D + L+ D+ + DKD + D +
Sbjct: 1182 LLDDVDVVDKDTLLDDVDVVD-KDTLLDDVDIVDGDTLIDDVDDVDKDTLLDDVDVVKDV 1240
Query: 441 AMTVEVTV 464
+ +V V
Sbjct: 1241 GLLEDVDV 1248
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 324 EKDSLLSTLDSIKHSELLLDISECDKDDITRYADRILSRAMTVEVTVRTD 473
+KD+LL +D + LL D+ + DKD + D + + +V V D
Sbjct: 23 DKDTLLDDVDVVDGDTLLDDVDDVDKDTLLDDVDVVDKDTLLDDVDVVED 72
>SB_56580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1092
Score = 28.3 bits (60), Expect = 6.6
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = +3
Query: 273 VEMRVERLRKDTVRIEEE-KDSLLSTLDSIKHSELLLDISE---CDKDDITRYADRILSR 440
+E E DT+ +E +D LL + K E LL S+ D+I R A+ +L++
Sbjct: 451 LENLAESCEXDTITPDEILRDRLLFGIHDTKVRERLLRESKLTLAKTDEICRAAESMLAQ 510
Query: 441 AMTVEVTVRTDRDHQQEE 494
V+ T TD + Q+E
Sbjct: 511 MKIVKDTSETDVNAMQQE 528
>SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 28.3 bits (60), Expect = 6.6
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Frame = +3
Query: 120 RFSESASQTMEVDQFALEIAYPEGSRLPLIDESSVL--GTQAPKDRLIAVLDQVEMRVER 293
R E +Q+ EVD E P G ++ES VL +A + +D+VE VE
Sbjct: 714 RAKEVEAQSKEVDAPVKEAEAPAGEAEAPVEESEVLVEKAEASVEEAEVPVDEVEASVEE 773
Query: 294 ----LRKDTVRIEEEKDSLLSTLDSIKHSELLLDISE 392
+ +EE K S+ ++ +E+ ++ +E
Sbjct: 774 AEAPAHEAEAPVEEAKSSIEEAEVPVEEAEVPVEEAE 810
Score = 27.9 bits (59), Expect = 8.8
Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 4/127 (3%)
Frame = +3
Query: 129 ESASQTMEVDQFALEIAYPEGSRLPLIDESSVLGTQAPKDRLIAVLDQVEMRVER----L 296
+ A ++E+ + +E A R+ ESSV +AP++ + A +++VE VE +
Sbjct: 1119 KEAEASVEITEAPIEEAEAPDERV----ESSVEEAEAPEEEVKAPVEEVEAPVEEAVASV 1174
Query: 297 RKDTVRIEEEKDSLLSTLDSIKHSELLLDISECDKDDITRYADRILSRAMTVEVTVRTDR 476
+ V IEE + T ++ +E + +E ++ + + A E V
Sbjct: 1175 EEAEVPIEEAETQAEDTEGPVEDAEASVQKAEAPVEETEAPFEEDEAPAEKTEKPVEAGP 1234
Query: 477 DHQQEEA 497
Q+ EA
Sbjct: 1235 SVQEAEA 1241
>SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13)
Length = 1072
Score = 27.9 bits (59), Expect = 8.8
Identities = 20/78 (25%), Positives = 31/78 (39%)
Frame = +2
Query: 473 PRPSAGGSSVSGEHVHRSAGDVRAQRRSECAFPLPDLYERVHVSAGPQRGHRQEL*DGHP 652
P+P SS +G V S A + + + + Y+ SA P E +
Sbjct: 419 PKPQEVDSSSAGSSVQTSNDSSPAPQEDDKSSSATEEYKSEPSSAQPSANQSPEPEEEKE 478
Query: 653 GLHPRRSEARQETTPRPA 706
P S+ +ET+P PA
Sbjct: 479 EASPVPSKDEEETSPMPA 496
>SB_44732| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 675
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/49 (28%), Positives = 16/49 (32%)
Frame = -3
Query: 636 SSCRCPRWGPAETCTRSYRSGNGNAHSLRRCARTSPADRCTCSPDTELP 490
+S CPRW + S G GN L C T P P
Sbjct: 307 NSQECPRWNAGQWSQCSVTCGRGNIRRLVECVPTGSNCEARYRPSDSRP 355
>SB_17117| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = -1
Query: 551 VVVHGHHQLIDVHVHLIQSFLLLMVSVSAHCHLYGHSPGQDAVRVSCDIVLITL 390
V++H HH + S +++++V H H + H ++ C I++IT+
Sbjct: 207 VIMH-HHYRHYAPSSALPSLCIMIITVMHHHHHHRHYASSSSLPSLCSIIIITV 259
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,278,619
Number of Sequences: 59808
Number of extensions: 492351
Number of successful extensions: 2502
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2467
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1913853903
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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