Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2154
         (604 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075277-1|AAL68144.1|  481|Drosophila melanogaster AT30085p pro...    29   6.4  
AE014134-2377|AAF53319.1|  481|Drosophila melanogaster CG9254-PA...    29   6.4  
BT009964-1|AAQ22433.1|  405|Drosophila melanogaster RE70525p pro...    28   8.5  
AE014134-2090|AAF53116.1|  814|Drosophila melanogaster CG12602-P...    28   8.5  

>AY075277-1|AAL68144.1|  481|Drosophila melanogaster AT30085p
           protein.
          Length = 481

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -3

Query: 176 GSTFPPISTLKQSWIPAYRVG 114
           G+TFP +S L  SW+PA   G
Sbjct: 159 GTTFPALSVLLASWVPANERG 179


>AE014134-2377|AAF53319.1|  481|Drosophila melanogaster CG9254-PA
           protein.
          Length = 481

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -3

Query: 176 GSTFPPISTLKQSWIPAYRVG 114
           G+TFP +S L  SW+PA   G
Sbjct: 159 GTTFPALSVLLASWVPANERG 179


>BT009964-1|AAQ22433.1|  405|Drosophila melanogaster RE70525p
           protein.
          Length = 405

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
 Frame = -2

Query: 462 VVDNNIISCRTLDVFTSTIRLITE*LLS-SVKKKNLYLYSPRISFFLPILMAYFNANTLS 286
           + DN II   T  +  S I  +   +   S+   N   Y    S FL  L        L 
Sbjct: 111 LADNKIIFLNTFKMKLSIIVGVIHMIFGVSMSVVNFAYYKKYASIFLEFLPQVL---FLL 167

Query: 285 TLFGYIIYLRRFMWV 241
            LFGY++++  F WV
Sbjct: 168 LLFGYMVFMMFFKWV 182


>AE014134-2090|AAF53116.1|  814|Drosophila melanogaster CG12602-PA
           protein.
          Length = 814

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
 Frame = -2

Query: 462 VVDNNIISCRTLDVFTSTIRLITE*LLS-SVKKKNLYLYSPRISFFLPILMAYFNANTLS 286
           + DN II   T  +  S I  +   +   S+   N   Y    S FL  L        L 
Sbjct: 520 LADNKIIFLNTFKMKLSIIVGVIHMIFGVSMSVVNFAYYKKYASIFLEFLPQVL---FLL 576

Query: 285 TLFGYIIYLRRFMWV 241
            LFGY++++  F WV
Sbjct: 577 LLFGYMVFMMFFKWV 591


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,416,707
Number of Sequences: 53049
Number of extensions: 537296
Number of successful extensions: 935
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)