Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2154
         (604 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067945-16|AAC17675.1|  341|Caenorhabditis elegans Serpentine r...    30   1.5  
Z67735-1|CAN86576.1|  404|Caenorhabditis elegans Hypothetical pr...    29   1.9  
U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AF067949-1|AAC19236.2| 1446|Caenorhabditis elegans Suppressor of...    28   4.5  
AC006730-2|AAK72091.1|  322|Caenorhabditis elegans Serpentine re...    28   4.5  
U58752-7|AAB00669.1|  343|Caenorhabditis elegans Hypothetical pr...    27   7.8  
AL034488-4|CAA22449.1|  497|Caenorhabditis elegans Hypothetical ...    27   7.8  
AC103567-9|AAL35735.1|  204|Caenorhabditis elegans Hypothetical ...    27   7.8  

>AF067945-16|AAC17675.1|  341|Caenorhabditis elegans Serpentine
           receptor, class e (epsilon)protein 12 protein.
          Length = 341

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = -3

Query: 371 KKKICTYTLQESHFSYLF*WPILMQTRCQRYLVTLYIYEGLCGCV*KGKI 222
           ++ IC+  L  S F Y F  P +M   C ++ V    +    GC+  GK+
Sbjct: 259 RQAICSLALDASIFFYSFAIPQIMTCFCHKWKVQTNTFRIRIGCLRTGKV 308


>Z67735-1|CAN86576.1|  404|Caenorhabditis elegans Hypothetical
           protein C15A7.4 protein.
          Length = 404

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
 Frame = -1

Query: 166 FHLFLP*SNHGFLLI-EWES--RYTIKLELRSQFLKDSDVAMSIGSGNYL 26
           F +F+    H  L++ +WE+   +T+  +LRS   K+ + +M +G G YL
Sbjct: 2   FPIFIVLVIHIHLVVSQWETGKSFTVLTKLRSDLFKNYNGSMPVGKGEYL 51


>U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical
           protein C18H2.1 protein.
          Length = 1770

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = +2

Query: 323 GKKNEILGEYKYRFFFFTDDNNYSVIRRMVEVNTSNVLQDI 445
           GK+ +    ++Y FF    D N +++    ++N +NVL+ +
Sbjct: 840 GKEADFQKRWRYSFFTDRQDGNNALVDAAQDINATNVLKAV 880


>AF067949-1|AAC19236.2| 1446|Caenorhabditis elegans Suppressor of
           constitutive dauerformation protein 2 protein.
          Length = 1446

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
 Frame = -2

Query: 417 TSTIRLITE*LLSSVKKKNLYLY--SPRISFFLPILMA 310
           +ST RL+   +L S +KKNLY +   P   F++P+ +A
Sbjct: 239 SSTSRLVVRSILQSGEKKNLYEHWLKPASVFWVPVQVA 276


>AC006730-2|AAK72091.1|  322|Caenorhabditis elegans Serpentine
           receptor, class i protein34 protein.
          Length = 322

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 280 IWLHYIFTKVYVGVSKKVRSSTGCVIF 200
           IW HY+ T + V    + +   GCV+F
Sbjct: 88  IWSHYLITLILVSAIVEAQILIGCVVF 114


>U58752-7|AAB00669.1|  343|Caenorhabditis elegans Hypothetical
           protein B0218.7 protein.
          Length = 343

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
 Frame = +2

Query: 281 NVDNVFALK*AIKIGKKNEILGEYKYRFFFFTDD--NNYSVIRR 406
           NV + F+LK + ++  KN+++ E + RFF    D  N Y+ ++R
Sbjct: 32  NVTSDFSLKNSRQLQIKNQLILENQNRFFVMIHDTYNPYTAVQR 75


>AL034488-4|CAA22449.1|  497|Caenorhabditis elegans Hypothetical
           protein Y54G11A.4 protein.
          Length = 497

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 14/55 (25%), Positives = 28/55 (50%)
 Frame = +2

Query: 380 DNNYSVIRRMVEVNTSNVLQDIMLLSTTVKDILSRDENIFVQTKKAQGKRNVNNH 544
           D  Y +  ++V++  SN  +D+ + +     ILS+D   +  T +   +RN  +H
Sbjct: 388 DTMYPIRDKIVQIGGSNSQRDLFVQTLIQSCILSKDPKNWGLTPELLAERNALHH 442


>AC103567-9|AAL35735.1|  204|Caenorhabditis elegans Hypothetical
           protein Y51F10.8 protein.
          Length = 204

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 507 QKKHRVSAMLIIIRYSLY*WVGHICRRTDDR 599
           ++K ++   LI I+     W GH+ RRTD R
Sbjct: 106 REKSKLRDPLIHIKKRKLGWAGHVARRTDGR 136


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,883,728
Number of Sequences: 27780
Number of extensions: 292962
Number of successful extensions: 642
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)