Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2151
         (808 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   2.5  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    23   4.4  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    23   4.4  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   5.8  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   5.8  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   7.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   7.7  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 401 GDDVEFIIQTRNGKEVACNIT 463
           G+    ++Q RNG  + CNI+
Sbjct: 357 GEFRSVVVQKRNGSMIECNIS 377


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -1

Query: 694 LKLHPISVSERKLTTLVFISKGDLNFRMICSTVSDAPRE 578
           L L  I  +  K  T+    K   N R +CS  +D P+E
Sbjct: 14  LVLLAIEDTMSKKMTIEEAKKTIKNLRKVCSKKNDTPKE 52


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 652 TLVFISKGDLNFRMICSTVSDAPRE 578
           T+  + K   N R +CS  +D P+E
Sbjct: 2   TIEELKKTIKNLRKVCSKKNDTPKE 26


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = +3

Query: 690 FKLQPIVVISSSAPL 734
           F LQ +VVISSS PL
Sbjct: 635 FPLQFLVVISSSNPL 649


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 656 HHTGLYLQRGPQLQNDLQHGIGCAQGEDRSVL 561
           HH       GPQ++  LQ+   CA+ E   +L
Sbjct: 465 HHPHPPETPGPQVETILQNACFCARNELMMIL 496


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -1

Query: 640 ISKGDLNFRMICSTVSDAPRERIV 569
           I+ GDLNF  +   + +AP  +++
Sbjct: 383 IANGDLNFNEVNFRILNAPVNQLI 406


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 21/58 (36%), Positives = 26/58 (44%)
 Frame = +2

Query: 335 ADVVKEIFFHFSETKCKEELTLGDDVEFIIQTRNGKEVACNITKLPSGSVVFEDVSPE 508
           AD VK + +H   T   EE   GDD +       GK +      LPSG +   DV PE
Sbjct: 131 ADFVKVLSWH---TDQGEEFVPGDDYD-------GKYLV-----LPSGELHIRDVGPE 173


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,617
Number of Sequences: 438
Number of extensions: 5151
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25610547
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)