Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2150
(705 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0380 - 24833533-24834161,24834247-24834427,24834560-24834787 140 7e-34
06_03_0679 - 23464009-23464381,23464804-23464886,23466537-234667... 126 1e-29
12_01_0760 + 6910325-6910558,6911305-6911455,6911949-6912115,691... 126 2e-29
12_01_0756 + 6869100-6869327,6869943-6870123,6870233-6870399,687... 123 2e-28
12_01_0762 + 6915299-6915532,6916043-6916220,6916490-6916656,691... 118 5e-27
12_01_0764 + 6934570-6934726,6935150-6935316,6935408-6935490,693... 109 3e-24
11_02_0101 - 8306468-8307099,8307227-8307404,8307990-8308259 107 8e-24
12_01_0759 + 6894556-6894628,6894653-6894738,6895039-6895121,689... 92 5e-19
01_06_1628 + 38745964-38746480,38747116-38747282,38747325-387474... 92 5e-19
09_04_0404 + 17322664-17322718,17323676-17323849,17324695-173248... 38 0.010
12_01_0763 + 6931678-6931911,6932161-6932172 36 0.024
09_04_0500 - 18120287-18122233 28 8.3
08_02_1446 + 27156449-27156790,27157961-27158042,27158698-271587... 28 8.3
02_02_0662 - 12736904-12737214,12737632-12737914 28 8.3
>04_04_0380 - 24833533-24834161,24834247-24834427,24834560-24834787
Length = 345
Score = 140 bits (340), Expect = 7e-34
Identities = 94/235 (40%), Positives = 119/235 (50%), Gaps = 15/235 (6%)
Frame = +1
Query: 46 RKYVVKNHFKGVPKREDYELVEFV------IPPLIDGEVLVKAEWISVDPYLRA-YNSYQ 204
+K V++NH G PK D ELV +P DG VLVK ++S DPY+R +S+
Sbjct: 6 KKIVLRNHVTGFPKESDMELVAATGAAPSRVPEGTDGAVLVKNLYLSCDPYMRGRMSSHD 65
Query: 205 AVPYDQF-------SYQVGVVVESKDSNYPIGTRVVAHKGWCDHYVFTPSTQPNTPKDRI 363
D F Y VG VV+S + G V GW ++ + P+ I
Sbjct: 66 GSYVDAFVVGEAITGYGVGKVVDSSHPGFKAGDLVWGMTGWEEYSLIK---DPSRALFAI 122
Query: 364 YKLPDLQGLSPSLGVGAVGMPGATAYFGFLEICKPKXXXXXXXXXXXXXXXSLVGQIAKI 543
+ PDL S G +GM G TAY GF EIC P+ LVGQ AK+
Sbjct: 123 -RHPDLP---LSYYTGLLGMAGFTAYVGFHEICAPREGERVYVSAASGAVGQLVGQFAKL 178
Query: 544 KGCRVIGFAGTDDKVKWLEEELGFDKAFNY-KTVDVPAALKEAAPNGIDCYFDNV 705
GC V+G AG+DDKV+ L E+ GFD AFNY K D+ AALK P GID YF+NV
Sbjct: 179 MGCYVVGSAGSDDKVRLLREKFGFDDAFNYKKESDLSAALKRCFPEGIDIYFENV 233
>06_03_0679 -
23464009-23464381,23464804-23464886,23466537-23466703,
23466821-23467007,23467093-23467311
Length = 342
Score = 126 bits (305), Expect = 1e-29
Identities = 89/233 (38%), Positives = 122/233 (52%), Gaps = 12/233 (5%)
Frame = +1
Query: 43 ARKYVVKNHFKGVPKREDYELVEFVIPPLID-GEVLVKAEWISVDPYL-----RAYNSYQ 204
+R V++H +G+P +D+E+ + + GEVLV+ ++SVDPY R S+
Sbjct: 5 SRYVAVRHHVEGLPSEDDFEVKAARVRWWPESGEVLVRNLYLSVDPYQLNRMKRRSASHL 64
Query: 205 AV----PYDQF-SYQVGVVVESKDSNYPIGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYK 369
AV P ++ +Y G VV S Y G V GW D+ +F PS P + K
Sbjct: 65 AVDGIVPGERIDAYGAGEVVASACEEYKEGDVVAGVLGWEDYTLFRPS-----PGVLMSK 119
Query: 370 LPDLQGLSPSLGVGAVGMPGATAYFGFLEICKPKXXXXXXXXXXXXXXXSLVGQIAKIKG 549
L L S + A+G G TAY G E+ +P+ SLVGQ AK+ G
Sbjct: 120 LAASDDLPLSHHLSALGTSGMTAYAGLYEVGRPEAGEKVFVSAASGSVGSLVGQFAKLAG 179
Query: 550 CRVIGFAGTDDKVKWLEEELGFDKAFNYK-TVDVPAALKEAAPNGIDCYFDNV 705
C V+G AGT+ KV L+ +LGFD AFNYK D+ +ALK P+GID YFDNV
Sbjct: 180 CYVVGCAGTNAKVDLLKNKLGFDDAFNYKDEPDMKSALKRYFPDGIDIYFDNV 232
>12_01_0760 +
6910325-6910558,6911305-6911455,6911949-6912115,
6912227-6912309,6912395-6912773
Length = 337
Score = 126 bits (304), Expect = 2e-29
Identities = 80/227 (35%), Positives = 118/227 (51%), Gaps = 5/227 (2%)
Frame = +1
Query: 40 SARKYVVKNHFKGVPKREDYELVEFVIPPLI----DGEVLVKAEWISVDPYLRAYNSYQA 207
S ++ ++K + G+ +D E+V PPL V+VK ++S DPY+R ++
Sbjct: 7 SNKRVILKRYVTGLLSEDDMEVVTVEAPPLDVPTGSKGVVVKNLYVSCDPYMRNRMTHHE 66
Query: 208 VPYDQFSYQVGVVVESKDSNYPIGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYKLPDLQG 387
+P + G V+ S ++ G V GW ++ V N P+ ++K+ +
Sbjct: 67 LPSYIPDFVPGEVISSGHLDFKAGDLVWGMTGWEEYTVI------NNPES-LFKINHPE- 118
Query: 388 LSPSLGVGAVGMPGATAYFGFLEICKPKXXXXXXXXXXXXXXXSLVGQIAKIKGCRVIGF 567
L S G +GMPG TAY GF ++ KPK +VGQ+AKI GC VIG
Sbjct: 119 LPLSYYTGILGMPGLTAYAGFFDVPKPKKGEYVFISGASGAVGQVVGQLAKITGCYVIGS 178
Query: 568 AGTDDKVKWLEEELGFDKAFNY-KTVDVPAALKEAAPNGIDCYFDNV 705
AG D+KV L+ + GFD AFNY K D+ AAL+ P GID Y++NV
Sbjct: 179 AGYDEKVNLLKSKFGFDDAFNYKKEQDLEAALRRYFPEGIDIYYENV 225
>12_01_0756 +
6869100-6869327,6869943-6870123,6870233-6870399,
6870523-6870605,6870716-6871094
Length = 345
Score = 123 bits (296), Expect = 2e-28
Identities = 82/233 (35%), Positives = 116/233 (49%), Gaps = 13/233 (5%)
Frame = +1
Query: 46 RKYVVKNHFKGVPKREDYELVEF---VIPPLIDGEVLVKAEWISVDPYLRAYNSYQAVPY 216
R+ ++K + G+P +D E+V + P V+VK ++S DPY+R + VP
Sbjct: 8 RRVILKRYVTGLPSEDDMEVVTAKTTLAVPAGSEAVMVKNLYVSCDPYMRGRMTRHEVPS 67
Query: 217 DQFSYQVGVV---------VESKDSNYPIGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYK 369
Y G V V S ++ G V GW ++ T N PK ++K
Sbjct: 68 YVPDYVPGEVITNCGVMKVVSSGHPDFKDGDLVWGVTGWEEY------TLVNNPKPYLHK 121
Query: 370 LPDLQGLSPSLGVGAVGMPGATAYFGFLEICKPKXXXXXXXXXXXXXXXSLVGQIAKIKG 549
+ + S G +G+ G TAY GF E+ KPK +VGQ+AKI G
Sbjct: 122 I-NYPEFPLSYYTGVLGIAGLTAYGGFFEVSKPKKGDYVFVSAASGAVGQIVGQLAKITG 180
Query: 550 CRVIGFAGTDDKVKWLEEELGFDKAFNY-KTVDVPAALKEAAPNGIDCYFDNV 705
C V+G AG+D+KVK L+ + GF AFNY K +D+ ALK P+GID YFDNV
Sbjct: 181 CYVVGSAGSDEKVKLLKTKFGFHDAFNYKKELDLEGALKRCFPDGIDIYFDNV 233
>12_01_0762 +
6915299-6915532,6916043-6916220,6916490-6916656,
6916770-6916852,6916940-6917318
Length = 346
Score = 118 bits (284), Expect = 5e-27
Identities = 81/237 (34%), Positives = 121/237 (51%), Gaps = 15/237 (6%)
Frame = +1
Query: 40 SARKYVVKNHFKGVPKREDYELVEFVIPPLI-----DGEVLVKAEWISVDPYLRAYNSYQ 204
S ++ ++K + G+ +D E+V +PPL V+VK ++S DPY+R +
Sbjct: 6 SNKRVILKRYVTGLLSEDDMEVVTTEVPPLAVVPAGSEAVVVKNLYVSCDPYMRNRMTRH 65
Query: 205 AVP--YDQF-------SYQVGVVVESKDSNYPIGTRVVAHKGWCDHYVFTPSTQPNTPKD 357
VP F ++ V V+ S ++ G V GW ++ V N P+
Sbjct: 66 EVPSYVSDFIPGEVLANFGVMRVISSGHPDFKAGDLVWGITGWEEYTVI------NNPES 119
Query: 358 RIYKLPDLQGLSPSLGVGAVGMPGATAYFGFLEICKPKXXXXXXXXXXXXXXXSLVGQIA 537
++++ + L S G +GMPG TAY GF E+ KPK +VGQ+A
Sbjct: 120 -LFRINHPK-LPLSYYTGILGMPGLTAYAGFFEVSKPKKGEYVFISAASGAVGQIVGQLA 177
Query: 538 KIKGCRVIGFAGTDDKVKWLEEELGFDKAFNY-KTVDVPAALKEAAPNGIDCYFDNV 705
KI GC V+G AG+D+KV L+ + GF+ AFNY K D+ AAL+ P GID YF+NV
Sbjct: 178 KIIGCYVVGSAGSDEKVSLLKTKFGFNDAFNYKKEPDLEAALRRYFPEGIDIYFENV 234
>12_01_0764 +
6934570-6934726,6935150-6935316,6935408-6935490,
6935588-6935966
Length = 261
Score = 109 bits (261), Expect = 3e-24
Identities = 63/155 (40%), Positives = 86/155 (55%), Gaps = 1/155 (0%)
Frame = +1
Query: 244 VVESKDSNYPIGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYKLPDLQGLSPSLGVGAVGM 423
V+ S ++ G V GW ++ V N P + ++K+ + L S G +GM
Sbjct: 3 VISSGHQDFKAGDLVWGITGWEEYTVI------NNP-ETLFKINHPE-LPLSYYTGILGM 54
Query: 424 PGATAYFGFLEICKPKXXXXXXXXXXXXXXXSLVGQIAKIKGCRVIGFAGTDDKVKWLEE 603
PG TAY GF E+ KPK +VGQ+AKI GC V+G AG+D+KV L+
Sbjct: 55 PGLTAYGGFFEVAKPKKGEYVFISSAFGAVGQIVGQLAKITGCYVVGSAGSDEKVNLLKT 114
Query: 604 ELGFDKAFNY-KTVDVPAALKEAAPNGIDCYFDNV 705
+ GFD AFNY K +D+ AALK P+GID YF+NV
Sbjct: 115 KFGFDDAFNYKKELDLEAALKRCFPDGIDIYFENV 149
>11_02_0101 - 8306468-8307099,8307227-8307404,8307990-8308259
Length = 359
Score = 107 bits (257), Expect = 8e-24
Identities = 81/246 (32%), Positives = 123/246 (50%), Gaps = 19/246 (7%)
Frame = +1
Query: 25 KVEMTSARKYVVKNHFK-GVPKREDYELVEFVIPPLID-----GEVLVKAEWISVDPYLR 186
++EM RK V++ + G P +D E+V + P + V+VK ++S DP++R
Sbjct: 10 EMEMVRNRKVVLRRYVTAGYPTVDDMEVVSSTMMPRVPLGTMAPAVMVKNIYLSCDPWMR 69
Query: 187 A----YNSYQAVPYDQF-------SYQVGVVVESKDSNYPIGTRVVAHKGWCDHYVFTPS 333
++ A + F ++ V VV+S + G V GW ++ + T
Sbjct: 70 GRMTKHDDATAEIAEDFVLGEAMVNFGVSKVVDSTHPVFAAGDLVWGLCGWEEYSLIT-- 127
Query: 334 TQPNTPKDRIYKLPDLQGLSPSLGVGAVGMPGATAYFGFLEICKPKXXXXXXXXXXXXXX 513
QP T ++K+ + L S G +G+ G TAY F E+ KPK
Sbjct: 128 -QPET----LHKI-NHPDLPLSYYTGVLGVTGLTAYAAFFEVGKPKKGETVFVSAASGAV 181
Query: 514 XSLVGQIAKIKGCRVIGFAGTDDKVKWLEEELGFDKAFNYK--TVDVPAALKEAAPNGID 687
+VGQ+AKI GC V+G AG+D+KV L+ + GF AFNYK + D+ AL+ P+GID
Sbjct: 182 GQIVGQLAKIAGCYVVGSAGSDEKVTLLKTKFGFHDAFNYKKESNDLTGALRRCFPDGID 241
Query: 688 CYFDNV 705
YFDNV
Sbjct: 242 IYFDNV 247
>12_01_0759 +
6894556-6894628,6894653-6894738,6895039-6895121,
6895278-6895650
Length = 204
Score = 91.9 bits (218), Expect = 5e-19
Identities = 50/97 (51%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Frame = +1
Query: 418 GMPGATAYFGFLEICKPKXXXXXXXXXXXXXXXSLVGQIAKIKGCRVIGFAGTDDKVKWL 597
GM G TAY GF E+ KPK +VGQ+AKIKGC V+G AG+DDKV L
Sbjct: 6 GMHGLTAYVGFFEMSKPKKACGAIG--------QIVGQLAKIKGCYVVGSAGSDDKVNLL 57
Query: 598 EEELGFDKAFNY-KTVDVPAALKEAAPNGIDCYFDNV 705
+ + GFD AFNY K D+ AALK P GID F+NV
Sbjct: 58 KTKFGFDDAFNYKKETDLEAALKRCFPEGIDIDFENV 94
>01_06_1628 +
38745964-38746480,38747116-38747282,38747325-38747440,
38747718-38748114
Length = 398
Score = 91.9 bits (218), Expect = 5e-19
Identities = 64/171 (37%), Positives = 84/171 (49%), Gaps = 14/171 (8%)
Frame = +1
Query: 235 VGVVVESKDSNYPIGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYKLPDLQ--GLSPSLGV 408
V VV+S + G V GW ++ + DR +L +Q + S +
Sbjct: 120 VARVVDSTHPGFSAGDIVSGMTGWEEYSLI----------DRPEQLSKIQQSDIPLSYHL 169
Query: 409 GAVGMPGATAYFGFLEICKPKXXXXXXXXXXXXXXXSLVGQIAKIKGCRVIGFAGTDDK- 585
G +GMPG TAY GF EIC PK +VGQ+AK+ GC V+G AGT+ K
Sbjct: 170 GLLGMPGFTAYAGFYEICSPKKGEFVFVSAASGAVGQIVGQLAKLHGCYVVGSAGTNQKM 229
Query: 586 ----------VKWLEEELGFDKAFNYK-TVDVPAALKEAAPNGIDCYFDNV 705
V+ L+ + GFD AFNYK D+ AALK P GID YF+NV
Sbjct: 230 HHSGFTAMFQVELLKGKFGFDAAFNYKEEPDLTAALKRYFPEGIDIYFENV 280
>09_04_0404 +
17322664-17322718,17323676-17323849,17324695-17324876,
17325312-17325417,17325708-17325784,17326485-17326572,
17327320-17327509,17328353-17328479,17328584-17328664,
17328815-17328916,17329042-17329137,17329279-17329353,
17329746-17329865,17330319-17330447,17330762-17330839,
17331330-17331416,17333538-17333651,17334294-17334362,
17334741-17334785
Length = 664
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1
Query: 529 QIAKIKGCRVIGFAGTDDKVKWLEEELGFDKAFNYKTVDVPAALKEAAPNGIDCYFDNV 705
Q+AK+ G +V+ G K L LG D+ NY+ + LK+ P G D +++V
Sbjct: 451 QLAKLAGNKVVATCGGKCKAALLSS-LGVDRVINYQNEKIKDVLKKEFPRGADIIYESV 508
>12_01_0763 + 6931678-6931911,6932161-6932172
Length = 81
Score = 36.3 bits (80), Expect = 0.024
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Frame = +1
Query: 34 MTSARKYVVKNHFKGVPKREDYELVEFVIPPLI----DGEVLVKAEWISVDPYLRAYNSY 201
+ S ++ ++K + G+ +D E+V PPL V+VK +IS DPY+R +Y
Sbjct: 5 VVSNKRVILKRYVTGLVSEDDMEVVTVEAPPLAVPAGSKTVVVKNLYISCDPYMRNRMTY 64
Query: 202 QAVP 213
P
Sbjct: 65 HEEP 68
>09_04_0500 - 18120287-18122233
Length = 648
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 340 PNTPKDRIYKLPDLQGLSPSLGVGAVGMPGATAY 441
PN PK + K L GL S+ VG G+ AY
Sbjct: 185 PNNPKGFVGKTLGLPGLKRSVPVGETGLREVAAY 218
>08_02_1446 +
27156449-27156790,27157961-27158042,27158698-27158792,
27159421-27159492,27159572-27159651,27159728-27159827,
27160064-27160141,27160408-27160455,27160570-27160638,
27161035-27161175,27161262-27161516
Length = 453
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 253 SKDSNYPIGTRVVAHKGWCDHYVFTPSTQPNTPK 354
S+D+N+PIGT H DH PS P P+
Sbjct: 402 SRDANHPIGTPPSNHSALADH----PSKPPPGPR 431
>02_02_0662 - 12736904-12737214,12737632-12737914
Length = 197
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 325 TPSTQPNTPKDRIYKLPDLQGLSPSLGVGAVGMP 426
+P +P K YK LSPSL V AVG+P
Sbjct: 18 SPLPEPPPAKPGSYKHGGSGALSPSLAVKAVGVP 51
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,070,581
Number of Sequences: 37544
Number of extensions: 378973
Number of successful extensions: 1189
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1170
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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