Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2148
(766 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 38 0.002
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 36 0.006
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 36 0.008
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 33 0.034
SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces po... 30 0.42
SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p... 29 0.55
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 29 0.55
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.55
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 29 0.96
SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster ... 28 1.3
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 28 1.7
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 28 1.7
SPAC328.10c |rps502|rps5-2|40S ribosomal protein S5|Schizosaccha... 27 2.9
SPAC8C9.08 |rps5||40S ribosomal protein S5|Schizosaccharomyces p... 27 2.9
SPBC25B2.07c |mug164||microtubule-associated protein|Schizosacch... 27 3.9
SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces ... 26 5.1
SPBC29A10.08 |||1,3-beta-glucanosyltransferase |Schizosaccharomy... 26 5.1
SPBP16F5.08c |||flavin dependent monooxygenase |Schizosaccharomy... 26 5.1
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 26 6.8
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 26 6.8
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 26 6.8
SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 9.0
SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces po... 25 9.0
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 25 9.0
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 37.9 bits (84), Expect = 0.002
Identities = 40/161 (24%), Positives = 67/161 (41%)
Frame = +1
Query: 265 LSAERGHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASA 444
+S S+ PQS +ASS T +T S +S + +P+T S +
Sbjct: 468 VSVPSSSSVQPQSSTPISSSSSASSPQSTLSTSSEVVSEVSSTLLSGSSAIPSTSSSTPS 527
Query: 445 CGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSE 624
+I S T S++ P S + S++T I + + S S++ S
Sbjct: 528 SSII--SSPMTS--VLSSSSSIPTSSSSDFSSSITTISSGISSSSIPSTFSSVSSILSSS 583
Query: 625 PFSRSETPTALVTAKTPKTFPDARTTMENWI*RRSARVSSS 747
S S T ++ ++ T TF A T+ + I S+ +SSS
Sbjct: 584 TSSPSSTSLSISSSSTSSTFSSASTSSPSSI---SSSISSS 621
Score = 32.3 bits (70), Expect = 0.078
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 14/179 (7%)
Frame = +1
Query: 187 KPAATVSLSTPQIPNXXXXXXXXXXXLSAERGHSLSPQSPLLTVRDCTA---SSLMKTSA 357
+P A+V+ S+ +P+ +S+ S SPQS L T + + S+L+ S+
Sbjct: 458 QPTASVASSSVSVPSSSSVQPQSSTPISSSSSAS-SPQSTLSTSSEVVSEVSSTLLSGSS 516
Query: 358 TFSGTAGTEKPPAISAAP---------DLPTTESPASACGLIRFRS--AKTKK*QTDSAA 504
T+ + +I ++P +PT+ S + + S + + T S+
Sbjct: 517 AIPSTSSSTPSSSIISSPMTSVLSSSSSIPTSSSSDFSSSITTISSGISSSSIPSTFSSV 576
Query: 505 QPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRSETPTALVTAKTPKT 681
+ S T + S+ +L I+ + TS S AST +PS S + + ++++ TP T
Sbjct: 577 SSILSSSTSSPSSTSL--SISSSSTS-STFSSASTSSPSSISSSISSSSTILSSPTPST 632
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 35.9 bits (79), Expect = 0.006
Identities = 39/149 (26%), Positives = 60/149 (40%), Gaps = 1/149 (0%)
Frame = +1
Query: 268 SAERGHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASAC 447
S+E + S QS +T + KT A+ T T + SA + T ++ +A
Sbjct: 226 SSESTIANSDQSSFITYESTQNPTANKTDASQQSTESTSS--SASAYSYITTLQTATTAQ 283
Query: 448 GLIRFRSAKTKK*Q-TDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSE 624
+ T T S P + S + S + P +A++ +S + AST A +
Sbjct: 284 QTTSENTYSTSGPNLTTSNTSPQISSTISSSSFIVESPSVALSTSSTTTITNASTPAANT 343
Query: 625 PFSRSETPTALVTAKTPKTFPDARTTMEN 711
SRS PT T + A TT EN
Sbjct: 344 IISRSSKPT-----DTTNSISFANTTPEN 367
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 35.5 bits (78), Expect = 0.008
Identities = 40/190 (21%), Positives = 84/190 (44%), Gaps = 6/190 (3%)
Frame = +1
Query: 205 SLSTPQIPNXXXXXXXXXXXLSAERGHSL----SPQSPLLTVRDCTASSLMKTSATFSGT 372
SLST IP+ LS+ S S S +++ ++SS TS+T S +
Sbjct: 234 SLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSS 293
Query: 373 AGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTL 552
+ + P +++ ++ S +S + S+ + + ++ P S T++ S+ +
Sbjct: 294 SSSSSSPTSTSSTISSSSSSSSSFSSTL---SSSSMSSSSSFSSSPTSSSSTISSSSSSP 350
Query: 553 IPKIAVNITSVSRALP--ASTVAPSEPFSRSETPTALVTAKTPKTFPDARTTMENWI*RR 726
+ TS S++ +STV+ S S S ++ ++ P + +++ +
Sbjct: 351 SSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRPASSSSHSSSLSSHKSSS 410
Query: 727 SARVSSSPGS 756
S++ SS+P S
Sbjct: 411 SSKSSSAPVS 420
Score = 30.3 bits (65), Expect = 0.31
Identities = 35/155 (22%), Positives = 67/155 (43%)
Frame = +1
Query: 292 SPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSA 471
SP S T +SSL+ S+ S + +S + ++ P ++ F S
Sbjct: 122 SPTSSEYTPSSTESSSLLDPSSVSSAILPSSTSVEVSISSSSLSSSDPLTSS---TFSSL 178
Query: 472 KTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRSETPT 651
+ + S++QP V S T + + + P + S ++ +S+ +PS S + T +
Sbjct: 179 SS----STSSSQPSVSS-TSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSS 233
Query: 652 ALVTAKTPKTFPDARTTMENWI*RRSARVSSSPGS 756
+L T+ P T + +T + S+ +SS S
Sbjct: 234 SLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSS 268
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 33.5 bits (73), Expect = 0.034
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 3/160 (1%)
Frame = +1
Query: 280 GHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIR 459
GH+ + S T TA+S + +SAT S T+ + + D+ T PAS+
Sbjct: 141 GHASASTSIPSTAITVTANSTIYSSATSSFPYSTDVSVSTGTSTDIVTLPPPASSTSSFS 200
Query: 460 FRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRS 639
T + S+ SP S + +P ++ S +L +S+V P+ + +
Sbjct: 201 -TITNTSMIPSSSSFTTTTGSPYYNTS--SFLPSSVIS----SASLSSSSVLPTSIITST 253
Query: 640 ETPTALVTAKTPKTFPDAR---TTMENWI*RRSARVSSSP 750
TP + ++ P TT + SA VSSSP
Sbjct: 254 STPVTVSSSSLSSFTPSYSTNLTTTGSTTTTGSATVSSSP 293
>SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 507
Score = 29.9 bits (64), Expect = 0.42
Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
Frame = +1
Query: 337 SLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPV 516
++M T+A + +A T A+ D+ ++ + S+ ++ T T AA V
Sbjct: 139 TVMYTTAVYGDSATTPAASEAQASSDILSSLASLSSASTDNLAASVTP---TTVAAS--V 193
Query: 517 RSPTLARSAVTLIPKIAVNITS-VSRALPASTVAPSEPFSRSE-TPTALVTAKTPKTFPD 690
S SA I + + TS VS +P+S ++ + P S SE TP + A + +
Sbjct: 194 ASSVDTDSASATISSVVDSATSSVSTVIPSSIISAAPPDSASESTPASTSYASSTTSATS 253
Query: 691 ARTT 702
TT
Sbjct: 254 TSTT 257
>SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 277
Score = 29.5 bits (63), Expect = 0.55
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Frame = +1
Query: 379 TEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPT-LARSAVTLI 555
T P S +LPT + S +S + QT +PP SPT + ++ ++
Sbjct: 135 TTFPSTTSITENLPTIDPTRSTRSSSHIQSLSPESKQTSDGHRPP--SPTSITTTSTSID 192
Query: 556 PKIAVNITSVSRALPASTVAPSEPFSRSETPT 651
P +A + S +T + P SR PT
Sbjct: 193 PSVAFSSKST-----LATTRTNAPLSRPSQPT 219
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 29.5 bits (63), Expect = 0.55
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +1
Query: 508 PPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRSETPTALVTAKTP 675
P +RS +L S V LIP + + + S + PAS P S S + + V + P
Sbjct: 439 PSIRSLSLRPSQVPLIPPLKCDPNAFSASTPASGAVSRTPSSVSLSSLSNVNSSMP 494
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.5 bits (63), Expect = 0.55
Identities = 39/178 (21%), Positives = 59/178 (33%)
Frame = +1
Query: 166 TTV*PN*KPAATVSLSTPQIPNXXXXXXXXXXXLSAERGHSLSPQSPLLTVRDCTASSLM 345
T V P P +T S STP P ++ G S SP T CT S+ +
Sbjct: 299 TPVTPTVPPTSTSSTSTPPPPAS-----------TSSTGTSSSPLPSTST--SCTTSTSI 345
Query: 346 KTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSP 525
+ + PP +++ P + S+ G T T S + PP +
Sbjct: 346 PPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNS 405
Query: 526 TLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRSETPTALVTAKTPKTFPDART 699
T +P + + + ST P + TP A T + P T
Sbjct: 406 T--TPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPYTST 461
Score = 27.1 bits (57), Expect = 2.9
Identities = 29/128 (22%), Positives = 46/128 (35%), Gaps = 3/128 (2%)
Frame = +1
Query: 301 SPLLTVR-DCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKT 477
SPL T CT S+ + + + PP +++ P + S+ G T
Sbjct: 276 SPLPTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPST 335
Query: 478 KK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSV--SRALPASTVAPSEPFSRSETPT 651
T S + PP + T +P + + TS A +ST S P + T
Sbjct: 336 STSCTTSTSIPPTGNST--TPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSC 393
Query: 652 ALVTAKTP 675
T+ P
Sbjct: 394 TTSTSIPP 401
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 28.7 bits (61), Expect = 0.96
Identities = 25/90 (27%), Positives = 38/90 (42%)
Frame = +1
Query: 490 TDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRSETPTALVTAK 669
+DSA+ PPV ++ RS V+ P+ I SV PS + P +
Sbjct: 509 SDSASPPPVPRLSITRSQVSREPEKPEEIPSV-------PPLPSNFKDKGHVPQQRSVSY 561
Query: 670 TPKTFPDARTTMENWI*RRSARVSSSPGSR 759
TPK D +++ + S+ V S P R
Sbjct: 562 TPKRSSDTSESLQPSLSFASSNVLSEPFDR 591
>SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 782
Score = 28.3 bits (60), Expect = 1.3
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Frame = +3
Query: 138 ISCDKYWKCDN----GVAELKTCGNGLAFDATDS--KYLTENCDYLHN 263
+ CD+ W C+N G+ L C NG+ +D K L D L N
Sbjct: 30 LKCDRVWPCENCKKRGIPNL--CPNGILVSVSDKLIKLLLSRIDTLQN 75
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.9 bits (59), Expect = 1.7
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
Frame = +1
Query: 349 TSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPT 528
TS+ F+ T+G P + ++ P +T +P S F + T T SA+ P S
Sbjct: 621 TSSGFNTTSGL--PTSSASTPLSNSTVAPTSTFTSSGFNT--TSGLPTSSASTPSSNSSI 676
Query: 529 LARSAVT---LIPKIAVNITSVSRALPASTVAPSEPFSRS 639
+ S T + +S S L STVAP+ F+ S
Sbjct: 677 VPTSTFTSSGFNTTSGLPTSSASTPLSNSTVAPTSTFTSS 716
Score = 26.6 bits (56), Expect = 3.9
Identities = 27/115 (23%), Positives = 53/115 (46%)
Frame = +1
Query: 328 TASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQ 507
T+SSL +SAT S A + + A+ + ++ +S+ S+ T S++
Sbjct: 105 TSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLASSSTTSSSLASSST 164
Query: 508 PPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRSETPTALVTAKT 672
S T SA + +++ T+ S + +S++A S S + T +A T+ +
Sbjct: 165 NSTTSATPTSSATS----SSLSSTAASNSATSSSLASS---SLNSTTSATATSSS 212
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 27.9 bits (59), Expect = 1.7
Identities = 22/97 (22%), Positives = 45/97 (46%)
Frame = +1
Query: 364 SGTAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSA 543
S A + + A SA +PT+ S + ++ S SAA V +P ++ +A
Sbjct: 202 SSVASSSEISAGSATSYVPTSSSSIALSSVVASASV--------SAANKGVSTPAVSSAA 253
Query: 544 VTLIPKIAVNITSVSRALPASTVAPSEPFSRSETPTA 654
+ ++ ++S + +ST++ + S S +PT+
Sbjct: 254 ASSSAVVSSVVSSATSVAASSTISSATSSSASASPTS 290
>SPAC328.10c |rps502|rps5-2|40S ribosomal protein
S5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 203
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 289 LSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAP 411
L+ Q+PL + D A+ + +T G+AGT + A+ +P
Sbjct: 102 LTDQNPLQVLVDAVAACGPREDSTRIGSAGTVRRQAVDVSP 142
>SPAC8C9.08 |rps5||40S ribosomal protein S5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 289 LSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAP 411
L+ Q+PL + D A+ + +T G+AGT + A+ +P
Sbjct: 102 LTDQNPLQVLVDAVAACGPREDSTRIGSAGTVRRQAVDVSP 142
>SPBC25B2.07c |mug164||microtubule-associated
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 26.6 bits (56), Expect = 3.9
Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 3/129 (2%)
Frame = +1
Query: 334 SSLMKTSATFSGTAGTEKPPAI---SAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAA 504
SS+ S + G + P + + + D P +SP S + S
Sbjct: 178 SSMAVRSPSRLGNGPNVRSPKVGFNAKSDDSPVVKSPGSNDKPSASPRISVRSLGNSSVV 237
Query: 505 QPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRSETPTALVTAKTPKTF 684
+PP R+ T P VN+T+ S ++ ++ +PS+ + T +
Sbjct: 238 RPPTRTSTTR-------PLSRVNVTNASGSISKNSTSPSKVKVNASTKIVRPVSAAQTVR 290
Query: 685 PDARTTMEN 711
P +R EN
Sbjct: 291 PGSRIFREN 299
>SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 561
Score = 26.2 bits (55), Expect = 5.1
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 493 DSAAQPPVRSPTLARSAV-TLIPKIAVNITSVSRALPASTVAPSEPFS 633
+S+AQ P A SA T P TS AST++PS PFS
Sbjct: 349 NSSAQSPHPRVFSANSAFSTTSPPPLTPSTSRDYPFSASTISPSTPFS 396
>SPBC29A10.08 |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 459
Score = 26.2 bits (55), Expect = 5.1
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +3
Query: 162 CDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVEC 272
C N V LK NG + S+ L+E C Y N C
Sbjct: 374 CSNAVKNLKCSANGTPSGSKISQVLSELC-YYDNKAC 409
>SPBP16F5.08c |||flavin dependent monooxygenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 447
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 664 QLPVPSASPILKTVPMGQP 608
+LPVPS +PIL T P+ P
Sbjct: 56 KLPVPSTNPILTTEPIVGP 74
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 25.8 bits (54), Expect = 6.8
Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Frame = +1
Query: 325 CTASSLMKTSATFSG-TAGTEKPPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSA 501
C SSL KT + TA P I+ ++ + L+R K+ D+
Sbjct: 314 CELSSLSKTDISLPFITADATGPKHINM--EISRAQFEKLVDPLVRRTIDPCKRALKDAN 371
Query: 502 AQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSE 624
Q + + +T +P++ + S+ + PA +V P E
Sbjct: 372 LQTSEINEVILVGGMTRMPRVVETVKSIFKREPAKSVNPDE 412
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 25.8 bits (54), Expect = 6.8
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +1
Query: 559 KIAVNITSVSRALP---ASTVAPSEPFSRSETPTA 654
KI +T +P AS+ PSE SR+ETPTA
Sbjct: 478 KIVNPVTHTEVVVPQKNASSPNPSETNSRAETPTA 512
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 25.8 bits (54), Expect = 6.8
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 298 QSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASA 444
Q+ T T ++ ++T+ +GTAGTE A +A PTT + +A
Sbjct: 1191 QATTATETQATTATEVQTTTGATGTAGTE-TQATTATEVQPTTGATGTA 1238
Score = 25.8 bits (54), Expect = 6.8
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 298 QSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPASA 444
Q+ T T ++ ++T+ +GTAGTE A +A PTT + +A
Sbjct: 1273 QATTATETQATTATEVQTTTGATGTAGTE-TQATTATEVQPTTGATGTA 1320
>SPBC2G2.14 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 25.4 bits (53), Expect = 9.0
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 490 TDSAAQPPVRSPTLARSAV 546
++SAA PPV SP L RS +
Sbjct: 479 SNSAASPPVSSPGLRRSHI 497
>SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 472
Score = 25.4 bits (53), Expect = 9.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 336 FPDENKCDVFWNCW 377
F D N D +WNCW
Sbjct: 350 FADRNFYDDWWNCW 363
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 25.4 bits (53), Expect = 9.0
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 520 SPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRSETPTA 654
S A S T P A + T VS+ + AST +EP ++ TP++
Sbjct: 316 SADTAGSPATSPPATADSKTIVSKTISASTTQQTEPLQQT-TPSS 359
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,142,165
Number of Sequences: 5004
Number of extensions: 65285
Number of successful extensions: 247
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 246
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 367316502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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