Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2146
         (807 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0DAG6 Cluster: Chromosome undetermined scaffold_43, wh...    37   0.69 
UniRef50_Q9YVY1 Cluster: Putative uncharacterized protein MSV111...    34   4.8  
UniRef50_Q7RPC0 Cluster: Putative uncharacterized protein PY0153...    34   4.8  
UniRef50_A5FH07 Cluster: DNA alkylation repair enzyme-like prote...    33   6.4  

>UniRef50_A0DAG6 Cluster: Chromosome undetermined scaffold_43, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_43,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 359

 Score = 36.7 bits (81), Expect = 0.69
 Identities = 18/56 (32%), Positives = 33/56 (58%)
 Frame = -2

Query: 665 KERYFVVYNIIYISRKLPVYIIKFINNTELYSVNRLQWSAFDRYELFNSILNFTEE 498
           KE+YF+++ I  I+ KL +   + +    L+ + + QW  F++    +SILN +EE
Sbjct: 72  KEKYFLIWCITKITEKLQIKFHELVMPFLLFIIVQYQWKVFEK---LSSILNLSEE 124


>UniRef50_Q9YVY1 Cluster: Putative uncharacterized protein MSV111;
           n=1; Melanoplus sanguinipes entomopoxvirus|Rep: Putative
           uncharacterized protein MSV111 - Melanoplus sanguinipes
           entomopoxvirus (MsEPV)
          Length = 201

 Score = 33.9 bits (74), Expect = 4.8
 Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
 Frame = -2

Query: 725 TYINSRKIHVTQKNNLCR*LKERYFVVYN--IIYISRKLPVYIIKFINNTELYSVNRLQW 552
           TYI +  IH    N +     +  F++YN  +     +LP    K +N T+         
Sbjct: 67  TYIQNNLIHELFINKVLFCYDDYIFLIYNKYVFKYENRLPTVFTKQMNLTDSIPPILYTI 126

Query: 551 SAFDRYELFNSILNFTEESVHIFIKYF 471
             +D+Y + N +  +++  +  F+KY+
Sbjct: 127 KYYDKYFVINKLKEYSKSILKNFMKYY 153


>UniRef50_Q7RPC0 Cluster: Putative uncharacterized protein PY01539;
           n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY01539 - Plasmodium yoelii yoelii
          Length = 600

 Score = 33.9 bits (74), Expect = 4.8
 Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
 Frame = -2

Query: 638 IIYISRKLPV-YIIKFINNTELYSVNRLQWSAFDRYELFNSILNFTEESVHIFIKYFN 468
           I  +++ +P+ +II   NNT L S+NR  +SAF + ++   I N T E+V  F K  N
Sbjct: 274 IFTVNKNIPINHIILRYNNT-LDSINRDLYSAFGKNDIVKYINNCTSENVDEFEKNTN 330


>UniRef50_A5FH07 Cluster: DNA alkylation repair enzyme-like protein;
           n=1; Flavobacterium johnsoniae UW101|Rep: DNA alkylation
           repair enzyme-like protein - Flavobacterium johnsoniae
           UW101
          Length = 267

 Score = 33.5 bits (73), Expect = 6.4
 Identities = 13/39 (33%), Positives = 25/39 (64%)
 Frame = -2

Query: 626 SRKLPVYIIKFINNTELYSVNRLQWSAFDRYELFNSILN 510
           ++ +PV I++ +N  E+ S N ++W A D+  L  ++LN
Sbjct: 12  AKDIPVSILEQLNKGEIESANLVEWLAVDQIVLLKNVLN 50


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 739,794,682
Number of Sequences: 1657284
Number of extensions: 14606664
Number of successful extensions: 26690
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26686
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69554636255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)