Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2145
         (736 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.63 
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    25   0.63 
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   3.4  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   7.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 9/48 (18%)
 Frame = -3

Query: 269 CLVCLVSTHNLGENRS*GLLNLGCL----FKEY-----YYLVCYSASF 153
           C V  VS H+L   RS   L +G L    FK Y     YY  C S +F
Sbjct: 19  CTVSNVSLHSLKNKRSGASLQVGILDSLVFKCYNLRRIYYFYCVSITF 66


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = -2

Query: 468 F*SRKLGTDNSPDQNHKSCQGVIVTL 391
           F SRKLG D      HK  +G IV L
Sbjct: 380 FISRKLGEDLVTHSGHKLAKGSIVNL 405


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -2

Query: 468 F*SRKLGTDNSPDQNHKSCQGVIVTL 391
           F SRKLG D      HK  +  IV L
Sbjct: 380 FISRKLGEDLVTHSGHKLAKASIVNL 405


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +3

Query: 690 NYLIQKNCNNTTKVL 734
           NYLI  N NNT  VL
Sbjct: 18  NYLILSNKNNTYLVL 32


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,885
Number of Sequences: 336
Number of extensions: 2895
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)