Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2144
         (886 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X80069-1|CAA56375.1|  475|Drosophila melanogaster 51KDa protein ...    31   2.8  
BT012446-1|AAS93717.1|  467|Drosophila melanogaster RE71279p pro...    31   2.8  
AY061102-1|AAL28650.1|  475|Drosophila melanogaster LD09025p pro...    31   2.8  
AJ290956-1|CAB93767.1|  475|Drosophila melanogaster eukaryotic t...    31   2.8  
AE014297-1977|AAN13641.1|  467|Drosophila melanogaster CG6476-PC...    31   2.8  
AE014297-1976|AAF55153.1|  475|Drosophila melanogaster CG6476-PB...    31   2.8  
AE014134-2117|AAF53137.1|  690|Drosophila melanogaster CG16965-P...    31   2.8  

>X80069-1|CAA56375.1|  475|Drosophila melanogaster 51KDa protein
           protein.
          Length = 475

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 451 RVSVKKSDVKKLALNTPIWLRKYTVRSMPSTIE-HWRKVTCGR 576
           R+S  K D+ K+ L TP+   K    ++   +E HWR +  G+
Sbjct: 415 RISATKGDLAKIVLTTPVCTEKGEKIALSRRVENHWRLIGWGQ 457


>BT012446-1|AAS93717.1|  467|Drosophila melanogaster RE71279p
           protein.
          Length = 467

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 451 RVSVKKSDVKKLALNTPIWLRKYTVRSMPSTIE-HWRKVTCGR 576
           R+S  K D+ K+ L TP+   K    ++   +E HWR +  G+
Sbjct: 407 RISATKGDLAKIVLTTPVCTEKGEKIALSRRVENHWRLIGWGQ 449


>AY061102-1|AAL28650.1|  475|Drosophila melanogaster LD09025p
           protein.
          Length = 475

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 451 RVSVKKSDVKKLALNTPIWLRKYTVRSMPSTIE-HWRKVTCGR 576
           R+S  K D+ K+ L TP+   K    ++   +E HWR +  G+
Sbjct: 415 RISATKGDLAKIVLTTPVCTEKGEKIALSRRVENHWRLIGWGQ 457


>AJ290956-1|CAB93767.1|  475|Drosophila melanogaster eukaryotic
           translation initiationfactor 2 gamma subunit protein.
          Length = 475

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 451 RVSVKKSDVKKLALNTPIWLRKYTVRSMPSTIE-HWRKVTCGR 576
           R+S  K D+ K+ L TP+   K    ++   +E HWR +  G+
Sbjct: 415 RISATKGDLAKIVLTTPVCTEKGEKIALSRRVENHWRLIGWGQ 457


>AE014297-1977|AAN13641.1|  467|Drosophila melanogaster CG6476-PC,
           isoform C protein.
          Length = 467

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 451 RVSVKKSDVKKLALNTPIWLRKYTVRSMPSTIE-HWRKVTCGR 576
           R+S  K D+ K+ L TP+   K    ++   +E HWR +  G+
Sbjct: 407 RISATKGDLAKIVLTTPVCTEKGEKIALSRRVENHWRLIGWGQ 449


>AE014297-1976|AAF55153.1|  475|Drosophila melanogaster CG6476-PB,
           isoform B protein.
          Length = 475

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 451 RVSVKKSDVKKLALNTPIWLRKYTVRSMPSTIE-HWRKVTCGR 576
           R+S  K D+ K+ L TP+   K    ++   +E HWR +  G+
Sbjct: 415 RISATKGDLAKIVLTTPVCTEKGEKIALSRRVENHWRLIGWGQ 457


>AE014134-2117|AAF53137.1|  690|Drosophila melanogaster CG16965-PA
           protein.
          Length = 690

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +1

Query: 457 SVKKSDVKKLALNTPIWLRKYTVRSMPSTIEHWRKVTCG 573
           +V  + V K+ALN   WL K+   +    +E WR+V+ G
Sbjct: 441 NVYTNAVSKIALNFAEWLAKHCGNASTERLEKWREVSDG 479


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,975,443
Number of Sequences: 53049
Number of extensions: 744714
Number of successful extensions: 1833
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1833
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)