Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2143
         (757 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81460-5|CAB03832.1|  952|Caenorhabditis elegans Hypothetical pr...    31   1.2  
Z70209-3|CAA94147.1|  952|Caenorhabditis elegans Hypothetical pr...    31   1.2  
U61948-4|AAB03146.1|  316|Caenorhabditis elegans Hypothetical pr...    30   1.5  
AF098501-3|AAM69106.1|  275|Caenorhabditis elegans Hypothetical ...    30   2.0  
AF098501-2|AAM69105.1|  298|Caenorhabditis elegans Hypothetical ...    30   2.0  
AF098501-1|AAC67404.2|  548|Caenorhabditis elegans Hypothetical ...    30   2.0  
Z93395-2|CAB07705.1|  905|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z83112-5|CAB05541.1|  905|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z81137-2|CAB03465.1|  386|Caenorhabditis elegans Hypothetical pr...    29   3.6  
U40948-1|AAA81727.1|  730|Caenorhabditis elegans Gliotactin (dro...    29   3.6  
Z81120-3|CAB03345.2|  135|Caenorhabditis elegans Hypothetical pr...    28   6.2  

>Z81460-5|CAB03832.1|  952|Caenorhabditis elegans Hypothetical
           protein C04A11.4 protein.
          Length = 952

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = +1

Query: 214 ICQLDEYCSPETNRC 258
           IC LDEYC+ ETN C
Sbjct: 444 ICDLDEYCNGETNDC 458


>Z70209-3|CAA94147.1|  952|Caenorhabditis elegans Hypothetical
           protein C04A11.4 protein.
          Length = 952

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = +1

Query: 214 ICQLDEYCSPETNRC 258
           IC LDEYC+ ETN C
Sbjct: 444 ICDLDEYCNGETNDC 458


>U61948-4|AAB03146.1|  316|Caenorhabditis elegans Hypothetical
           protein C46A5.6 protein.
          Length = 316

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
 Frame = +2

Query: 584 KRRNRNPNSSSKYETPDPLRRTN-QPLNVKDLETRTSQSDKSQGATTPKTISTALSNRH 757
           K R R   +S + E     RRT+ +    K  ET T  +DK++  +TP T    ++ RH
Sbjct: 245 KTRGRKRGTSVRIEKLSTSRRTSAKKKEEKQKETETFDADKNENPSTP-TAPPTMTRRH 302


>AF098501-3|AAM69106.1|  275|Caenorhabditis elegans Hypothetical
           protein H28G03.2c protein.
          Length = 275

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +1

Query: 529 KNRVKQYPNDLTHHNPHAEAPK-PKPELKLEIRNPGSPKTNEPTSQ 663
           K +V +  N L + +P + APK P P L + I  PG PK     SQ
Sbjct: 230 KAQVSKAQNSLNNSSPTSTAPKKPVPSL-MSINIPGVPKAGSSGSQ 274


>AF098501-2|AAM69105.1|  298|Caenorhabditis elegans Hypothetical
           protein H28G03.2b protein.
          Length = 298

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +1

Query: 529 KNRVKQYPNDLTHHNPHAEAPK-PKPELKLEIRNPGSPKTNEPTSQ 663
           K +V +  N L + +P + APK P P L + I  PG PK     SQ
Sbjct: 253 KAQVSKAQNSLNNSSPTSTAPKKPVPSL-MSINIPGVPKAGSSGSQ 297


>AF098501-1|AAC67404.2|  548|Caenorhabditis elegans Hypothetical
           protein H28G03.2a protein.
          Length = 548

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +1

Query: 529 KNRVKQYPNDLTHHNPHAEAPK-PKPELKLEIRNPGSPKTNEPTSQ 663
           K +V +  N L + +P + APK P P L + I  PG PK     SQ
Sbjct: 503 KAQVSKAQNSLNNSSPTSTAPKKPVPSL-MSINIPGVPKAGSSGSQ 547


>Z93395-2|CAB07705.1|  905|Caenorhabditis elegans Hypothetical
           protein ZC101.1 protein.
          Length = 905

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +1

Query: 190 DGIRCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNYDSGLCVKEC 327
           D   C ++ C+ +E+    TN C P  VVC+     +D G   K+C
Sbjct: 320 DEEHCSEVQCKSNEFRCESTNVCVPTVVVCDGWKDCHD-GSDEKKC 364


>Z83112-5|CAB05541.1|  905|Caenorhabditis elegans Hypothetical
           protein ZC101.1 protein.
          Length = 905

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +1

Query: 190 DGIRCGQLICQLDEYCSPETNRCAPCNVVCNKTHHNYDSGLCVKEC 327
           D   C ++ C+ +E+    TN C P  VVC+     +D G   K+C
Sbjct: 320 DEEHCSEVQCKSNEFRCESTNVCVPTVVVCDGWKDCHD-GSDEKKC 364


>Z81137-2|CAB03465.1|  386|Caenorhabditis elegans Hypothetical
           protein W02D9.3 protein.
          Length = 386

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = +1

Query: 499 RYLKQKFQPAKNRVKQYPNDLTHHNPHAEAPKPKPELKLEIRNPGSPKTNEPTS 660
           ++L  +   +KN  K+   D     P+ + P PKP +   + +P  P T+  TS
Sbjct: 207 KFLSSQSNGSKNAKKRRQADSDDDTPNVQIPFPKPSVFCPLLSP-EPATSSSTS 259


>U40948-1|AAA81727.1|  730|Caenorhabditis elegans Gliotactin
           (drosophila neuroligin-like) homolog protein 1 protein.
          Length = 730

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 19/56 (33%), Positives = 26/56 (46%)
 Frame = +1

Query: 529 KNRVKQYPNDLTHHNPHAEAPKPKPELKLEIRNPGSPKTNEPTSQREGLRDQNLTV 696
           K+  ++ P D TH +P+   PK    +   +   G P    PTSQR     Q LTV
Sbjct: 80  KDPTEELPKDGTHFDPNPLKPKNNITVFTFL---GVPYAEPPTSQRRFKPPQQLTV 132


>Z81120-3|CAB03345.2|  135|Caenorhabditis elegans Hypothetical
           protein T12D8.5 protein.
          Length = 135

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = +1

Query: 478 CRGRVSWRYLKQKFQPAKNRVKQYPNDLTHHNPHAEAPKPKPELKLE 618
           CR     +  K++ +  K  + +    L  HN H +AP+  PE  +E
Sbjct: 49  CRIESETQSNKERVELLKQEIDRAEQLLAEHNKHVDAPEIAPETYME 95


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,743,944
Number of Sequences: 27780
Number of extensions: 377931
Number of successful extensions: 1352
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1350
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)