Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2140
         (668 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0381 - 2961422-2963917                                           31   0.63 
04_03_0917 + 20798977-20801369,20801578-20801581                       29   2.5  
05_04_0375 + 20750170-20751011,20751707-20751865,20752894-207531...    29   4.4  
04_04_0765 - 27910189-27912393,27912521-27912598                       29   4.4  
10_06_0012 - 9586478-9588880                                           28   7.7  
04_03_0913 + 20777859-20780309                                         28   7.7  

>01_01_0381 - 2961422-2963917
          Length = 831

 Score = 31.5 bits (68), Expect = 0.63
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 492 SCQDRLQQCSLNPSNLLFPCHFLP 563
           SC DR+  C + P N+L    FLP
Sbjct: 620 SCHDRIIHCDIKPQNILLDASFLP 643


>04_03_0917 + 20798977-20801369,20801578-20801581
          Length = 798

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 492 SCQDRLQQCSLNPSNLLFPCHFLPPL 569
           SCQD +  C + P N+L    F+P +
Sbjct: 617 SCQDCIIHCDIKPENILLDASFVPKI 642


>05_04_0375 +
           20750170-20751011,20751707-20751865,20752894-20753146,
           20753287-20753316
          Length = 427

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = -3

Query: 534 YLG*GSTVVGDLGNWGGVCDLSDGCAVGDLG 442
           YLG GS V G +G     CD+ DG  V D G
Sbjct: 79  YLGRGSAVAGFVGRDLEPCDVFDGAWVPDAG 109


>04_04_0765 - 27910189-27912393,27912521-27912598
          Length = 760

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 19/43 (44%), Positives = 24/43 (55%)
 Frame = +1

Query: 430 SAPVAKIAYSAPIAKVAYAAPVAKIAYNSAPLTQVTFSSPAIS 558
           +A VA    +AP A VA  +PVA +A  S+P      SSPA S
Sbjct: 400 AAAVAAAGSTAP-AVVAPDSPVAAVAVFSSPTAVAASSSPAAS 441


>10_06_0012 - 9586478-9588880
          Length = 800

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 492 SCQDRLQQCSLNPSNLLFPCHFLPPL 569
           SC+D +  C + P N+L    F+P +
Sbjct: 612 SCRDCIIHCDIKPENILLDASFVPKI 637


>04_03_0913 + 20777859-20780309
          Length = 816

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 492 SCQDRLQQCSLNPSNLLFPCHFLPPL 569
           SCQD +  C + P N+L    F+P +
Sbjct: 619 SCQDCIIHCDIKPENILLDDLFIPKI 644


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,844,621
Number of Sequences: 37544
Number of extensions: 207489
Number of successful extensions: 819
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 817
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)