Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2139
         (701 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    32   0.020
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    28   0.25 
AY659930-1|AAT51798.2|  144|Anopheles gambiae lysozyme c-3 protein.    26   1.00 
DQ004402-1|AAY21241.1|  144|Anopheles gambiae lysozyme c-8 protein.    24   4.0  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   7.0  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   7.0  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 31.9 bits (69), Expect = 0.020
 Identities = 17/69 (24%), Positives = 36/69 (52%)
 Frame = -2

Query: 637 QRR*EKLHERNWLQGQRMS*SPKERHGHRLCKGRSKQQGLRVRHKLRVVQHAQHKLQQVR 458
           Q R ++  ++   Q Q+     +++ G R    + +QQ  + +H+ +  Q  Q + QQ R
Sbjct: 268 QLRQQRQQQQRPRQQQQQQQQQQQQQGERYVPPQLRQQRQQQQHQQQQQQQQQQRQQQQR 327

Query: 457 QRRKSLQER 431
           Q+++  Q+R
Sbjct: 328 QQQRQQQQR 336



 Score = 28.7 bits (61), Expect = 0.19
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -2

Query: 538 RSKQQGLRVRHKLRVVQHAQHKLQQVRQRRKSLQER 431
           R +QQ LR R + R  Q  Q + QQ +Q+++  Q+R
Sbjct: 173 RKRQQRLRRRERERQQQQQQQQQQQQQQQQQQQQQR 208



 Score = 23.0 bits (47), Expect = 9.3
 Identities = 15/70 (21%), Positives = 36/70 (51%)
 Frame = -2

Query: 640 RQRR*EKLHERNWLQGQRMS*SPKERHGHRLCKGRSKQQGLRVRHKLRVVQHAQHKLQQV 461
           +Q++ ++  +R   Q Q+     ++R   +  + + +QQ  R + + +  QH Q + Q  
Sbjct: 312 QQQQQQQQQQRQQQQRQQQR-QQQQRQQQQQQQQQQRQQQQRQQQQQQQQQHQQQQQQWQ 370

Query: 460 RQRRKSLQER 431
           +Q+++  Q R
Sbjct: 371 QQQQQQQQPR 380


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 28.3 bits (60), Expect = 0.25
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = -3

Query: 519 CVCGISCEWCSMRSISCNRCGSGVSRYRSDSF 424
           C+   +C WC+M + +  RC   + +Y  + +
Sbjct: 45  CIQTTNCRWCTMPNFTHPRCHGQIEKYCPEEY 76


>AY659930-1|AAT51798.2|  144|Anopheles gambiae lysozyme c-3 protein.
          Length = 144

 Score = 26.2 bits (55), Expect = 1.00
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -3

Query: 495 WCSMRSISCNRCGSGVSRYRSDSFGEERSTMRC 397
           WC+   +  N C    S  R D  G++   MRC
Sbjct: 79  WCAEGKVGANECKLQCSSLRDDDIGDD---MRC 108


>DQ004402-1|AAY21241.1|  144|Anopheles gambiae lysozyme c-8 protein.
          Length = 144

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -3

Query: 495 WCSMRSISCNRCGSGVSRYRSDSFGEERSTMRC 397
           WC+   +  N C    S  R D+  ++   MRC
Sbjct: 79  WCAEGKVGANECKLQCSSLRDDNIADD---MRC 108


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -3

Query: 573 QRSGMGIGCVRAGVSNRGCVCGISCEWCSMR 481
           ++ G+   C+R G S R C     C+ C  +
Sbjct: 372 RKHGLCFNCLRKGHSARECRSTYVCQQCKRK 402


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 15/58 (25%), Positives = 29/58 (50%)
 Frame = -2

Query: 616  HERNWLQGQRMS*SPKERHGHRLCKGRSKQQGLRVRHKLRVVQHAQHKLQQVRQRRKS 443
            H+ + +Q Q +   P +   H+  +   +QQ  + + + +  QH QH+LQ   Q + S
Sbjct: 1283 HQHSQIQLQPIQ-QPLQTLQHQYQQQLQQQQQQQQQQQQQHQQHQQHQLQHHHQPQLS 1339


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.316    0.128    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 440,175
Number of Sequences: 2352
Number of extensions: 6381
Number of successful extensions: 34
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)