Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2139
(701 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39644-2|AAA80360.2| 966|Caenorhabditis elegans Hypothetical pr... 29 2.4
AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical ... 29 2.4
AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical ... 29 2.4
Z50110-3|CAA90445.2| 459|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81455-6|CAN86597.1| 695|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81455-5|CAJ90505.1| 611|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81455-4|CAJ76928.1| 680|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81455-2|CAD54123.1| 745|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81455-1|CAB03807.2| 792|Caenorhabditis elegans Hypothetical pr... 28 7.4
AL032637-27|CAN86620.1| 695|Caenorhabditis elegans Hypothetical... 28 7.4
AL032637-26|CAJ90512.1| 611|Caenorhabditis elegans Hypothetical... 28 7.4
AL032637-25|CAJ76956.1| 680|Caenorhabditis elegans Hypothetical... 28 7.4
AL032637-24|CAD54171.1| 745|Caenorhabditis elegans Hypothetical... 28 7.4
AL032637-23|CAA21625.2| 792|Caenorhabditis elegans Hypothetical... 28 7.4
AL032637-1|CAD54169.1| 555|Caenorhabditis elegans Hypothetical ... 28 7.4
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 28 7.4
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 28 7.4
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 28 7.4
>U39644-2|AAA80360.2| 966|Caenorhabditis elegans Hypothetical
protein T10E10.4 protein.
Length = 966
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -3
Query: 582 LSHQRSGMGIGCVRAGVSNRGCVCGISCEWCSMRSISCNRCG 457
+S QR MGIGC G C + CS SI+ + CG
Sbjct: 615 MSVQRCAMGIGCPPGNQCENGVCCPM--PMCSSGSIASSVCG 654
>AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical
protein C36B7.5b protein.
Length = 1148
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 528 NRGCVCGISCEWCSMRSISCNR 463
NR C+ G+SCE S I CN+
Sbjct: 469 NRECIDGVSCEGASEEKILCNQ 490
>AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical
protein C36B7.5a protein.
Length = 1121
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 528 NRGCVCGISCEWCSMRSISCNR 463
NR C+ G+SCE S I CN+
Sbjct: 469 NRECIDGVSCEGASEEKILCNQ 490
>Z50110-3|CAA90445.2| 459|Caenorhabditis elegans Hypothetical
protein F18H3.4 protein.
Length = 459
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 547 CKGRSKQQGLRVRHKLRVVQHAQHKLQQVRQRRKSL 440
C+ R KQ RH ++ +H+LQ RRKSL
Sbjct: 180 CQNRFKQMKQERRHIEDEIRDLKHQLQGANSRRKSL 215
>Z81455-6|CAN86597.1| 695|Caenorhabditis elegans Hypothetical
protein B0399.1f protein.
Length = 695
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -2
Query: 556 HRLCKGRSKQQGLRVRHKLRVVQHAQHKLQQVRQRRKSLQER 431
H+ K K LR+RH R H+ ++ ++++ ++ LQE+
Sbjct: 486 HKYKKALHKGDDLRLRHHQRRFLHSINEFRRIKWDQRKLQEK 527
>Z81455-5|CAJ90505.1| 611|Caenorhabditis elegans Hypothetical
protein B0399.1e protein.
Length = 611
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -2
Query: 556 HRLCKGRSKQQGLRVRHKLRVVQHAQHKLQQVRQRRKSLQER 431
H+ K K LR+RH R H+ ++ ++++ ++ LQE+
Sbjct: 402 HKYKKALHKGDDLRLRHHQRRFLHSINEFRRIKWDQRKLQEK 443
>Z81455-4|CAJ76928.1| 680|Caenorhabditis elegans Hypothetical
protein B0399.1d protein.
Length = 680
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -2
Query: 556 HRLCKGRSKQQGLRVRHKLRVVQHAQHKLQQVRQRRKSLQER 431
H+ K K LR+RH R H+ ++ ++++ ++ LQE+
Sbjct: 471 HKYKKALHKGDDLRLRHHQRRFLHSINEFRRIKWDQRKLQEK 512
>Z81455-2|CAD54123.1| 745|Caenorhabditis elegans Hypothetical
protein B0399.1b protein.
Length = 745
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -2
Query: 556 HRLCKGRSKQQGLRVRHKLRVVQHAQHKLQQVRQRRKSLQER 431
H+ K K LR+RH R H+ ++ ++++ ++ LQE+
Sbjct: 536 HKYKKALHKGDDLRLRHHQRRFLHSINEFRRIKWDQRKLQEK 577
>Z81455-1|CAB03807.2| 792|Caenorhabditis elegans Hypothetical
protein B0399.1a protein.
Length = 792
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -2
Query: 556 HRLCKGRSKQQGLRVRHKLRVVQHAQHKLQQVRQRRKSLQER 431
H+ K K LR+RH R H+ ++ ++++ ++ LQE+
Sbjct: 583 HKYKKALHKGDDLRLRHHQRRFLHSINEFRRIKWDQRKLQEK 624
>AL032637-27|CAN86620.1| 695|Caenorhabditis elegans Hypothetical
protein B0399.1f protein.
Length = 695
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -2
Query: 556 HRLCKGRSKQQGLRVRHKLRVVQHAQHKLQQVRQRRKSLQER 431
H+ K K LR+RH R H+ ++ ++++ ++ LQE+
Sbjct: 486 HKYKKALHKGDDLRLRHHQRRFLHSINEFRRIKWDQRKLQEK 527
>AL032637-26|CAJ90512.1| 611|Caenorhabditis elegans Hypothetical
protein B0399.1e protein.
Length = 611
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -2
Query: 556 HRLCKGRSKQQGLRVRHKLRVVQHAQHKLQQVRQRRKSLQER 431
H+ K K LR+RH R H+ ++ ++++ ++ LQE+
Sbjct: 402 HKYKKALHKGDDLRLRHHQRRFLHSINEFRRIKWDQRKLQEK 443
>AL032637-25|CAJ76956.1| 680|Caenorhabditis elegans Hypothetical
protein B0399.1d protein.
Length = 680
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -2
Query: 556 HRLCKGRSKQQGLRVRHKLRVVQHAQHKLQQVRQRRKSLQER 431
H+ K K LR+RH R H+ ++ ++++ ++ LQE+
Sbjct: 471 HKYKKALHKGDDLRLRHHQRRFLHSINEFRRIKWDQRKLQEK 512
>AL032637-24|CAD54171.1| 745|Caenorhabditis elegans Hypothetical
protein B0399.1b protein.
Length = 745
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -2
Query: 556 HRLCKGRSKQQGLRVRHKLRVVQHAQHKLQQVRQRRKSLQER 431
H+ K K LR+RH R H+ ++ ++++ ++ LQE+
Sbjct: 536 HKYKKALHKGDDLRLRHHQRRFLHSINEFRRIKWDQRKLQEK 577
>AL032637-23|CAA21625.2| 792|Caenorhabditis elegans Hypothetical
protein B0399.1a protein.
Length = 792
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -2
Query: 556 HRLCKGRSKQQGLRVRHKLRVVQHAQHKLQQVRQRRKSLQER 431
H+ K K LR+RH R H+ ++ ++++ ++ LQE+
Sbjct: 583 HKYKKALHKGDDLRLRHHQRRFLHSINEFRRIKWDQRKLQEK 624
>AL032637-1|CAD54169.1| 555|Caenorhabditis elegans Hypothetical
protein B0399.1c protein.
Length = 555
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -2
Query: 556 HRLCKGRSKQQGLRVRHKLRVVQHAQHKLQQVRQRRKSLQER 431
H+ K K LR+RH R H+ ++ ++++ ++ LQE+
Sbjct: 346 HKYKKALHKGDDLRLRHHQRRFLHSINEFRRIKWDQRKLQEK 387
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform a
protein.
Length = 4488
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = -2
Query: 616 HERNWLQGQRMS*SPKERHGHR-LCKGRSKQQGLRVRHKLRVVQHAQHKLQQVRQRRKSL 440
H++ Q+ SP++ H+ L + +QQ L +L QH QH+ QQ +Q ++
Sbjct: 159 HQQQQQHYQQQQQSPRQEVTHQNLYEQHRRQQQLIREQQLYQHQHQQHQ-QQQQQPQEQQ 217
Query: 439 QER 431
Q+R
Sbjct: 218 QQR 220
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform d
protein.
Length = 4369
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = -2
Query: 616 HERNWLQGQRMS*SPKERHGHR-LCKGRSKQQGLRVRHKLRVVQHAQHKLQQVRQRRKSL 440
H++ Q+ SP++ H+ L + +QQ L +L QH QH+ QQ +Q ++
Sbjct: 159 HQQQQQHYQQQQQSPRQEVTHQNLYEQHRRQQQLIREQQLYQHQHQQHQ-QQQQQPQEQQ 217
Query: 439 QER 431
Q+R
Sbjct: 218 QQR 220
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform c
protein.
Length = 4447
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = -2
Query: 616 HERNWLQGQRMS*SPKERHGHR-LCKGRSKQQGLRVRHKLRVVQHAQHKLQQVRQRRKSL 440
H++ Q+ SP++ H+ L + +QQ L +L QH QH+ QQ +Q ++
Sbjct: 159 HQQQQQHYQQQQQSPRQEVTHQNLYEQHRRQQQLIREQQLYQHQHQQHQ-QQQQQPQEQQ 217
Query: 439 QER 431
Q+R
Sbjct: 218 QQR 220
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.128 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,495,902
Number of Sequences: 27780
Number of extensions: 144856
Number of successful extensions: 430
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 427
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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