Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2138
         (692 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    24   1.0  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   1.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.8  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    23   2.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   7.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.6  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 559 IYSAEKSYTRYL*HALKGIP 618
           +YS+   YT+Y+  A KG+P
Sbjct: 143 VYSSSVGYTQYVRIAAKGLP 162


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 333 LLSQPYFLV*QWTPNCN 383
           LLSQ +  V  W+PNC+
Sbjct: 225 LLSQAWISVHIWSPNCD 241


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 333 LLSQPYFLV*QWTPNCN 383
           LLSQ +  V  W+PNC+
Sbjct: 458 LLSQAWISVHIWSPNCD 474


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 333 LLSQPYFLV*QWTPNCN 383
           LLSQ +  V  W+PNC+
Sbjct: 458 LLSQAWISVHIWSPNCD 474


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -1

Query: 305 YHYPLVSHLKMV*YILK 255
           YH PL S+ K+V +ILK
Sbjct: 41  YHSPLESNHKLVTFILK 57


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 689 IHQIFKNVLGWHSENF 642
           + QIFKN+L  H E F
Sbjct: 392 VAQIFKNLLENHYEEF 407


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 333 LLSQPYFLV*QWTPNC 380
           LLSQ +  +  WTP C
Sbjct: 471 LLSQTWITLHIWTPKC 486


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 333 LLSQPYFLV*QWTPNC 380
           LLSQ +  +  WTP C
Sbjct: 471 LLSQTWITLHIWTPKC 486


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 333 LLSQPYFLV*QWTPNC 380
           LLSQ +  +  WTP C
Sbjct: 471 LLSQTWITLHIWTPKC 486


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 333 LLSQPYFLV*QWTPNC 380
           LLSQ +  +  WTP C
Sbjct: 471 LLSQTWITLHIWTPKC 486


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 488 FSYFHSVMSYGILLW 532
           ++ +  V S+G+LLW
Sbjct: 671 YTTYSDVWSFGVLLW 685


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,444
Number of Sequences: 336
Number of extensions: 3116
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)