Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2138
         (692 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           31   0.034
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    29   0.11 

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 31.1 bits (67), Expect = 0.034
 Identities = 18/87 (20%), Positives = 37/87 (42%)
 Frame = +2

Query: 137 GHTIDADDDEVNDAISCVVHWFRINNLLLNSKKTKCIKFTLKCIKPSLNVRQVDSDIIXX 316
           G  ++A      +A++ V HW   ++L +  +KT+C+  +       + +R  D ++   
Sbjct: 735 GIDVNAVKAAAEEAVASVSHWMAQHHLQIAPEKTECVLISSTKNPTQVTIRVGDVEV--- 791

Query: 317 XXXXXXXXXXXXXGITVDSKLQWGPHI 397
                        G+T+   L W PH+
Sbjct: 792 ----TSSRTMRYLGVTLHDHLSWLPHV 814


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 29.5 bits (63), Expect = 0.11
 Identities = 22/87 (25%), Positives = 34/87 (39%)
 Frame = +2

Query: 137 GHTIDADDDEVNDAISCVVHWFRINNLLLNSKKTKCIKFTLKCIKPSLNVRQVDSDIIXX 316
           G T D       +AI  V+ W   ++L L   KT+ +  +       + VR  D D+   
Sbjct: 668 GTTPDNVKAAAEEAIISVMEWMARHHLELAPAKTEMVVISSTKAPTRITVRVGDVDVTSS 727

Query: 317 XXXXXXXXXXXXXGITVDSKLQWGPHI 397
                        G+T+  KL W PH+
Sbjct: 728 RSIRYL-------GVTLQDKLSWLPHV 747


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,126
Number of Sequences: 2352
Number of extensions: 12649
Number of successful extensions: 26
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)