Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2137
         (548 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U35240-1|AAB38521.1|  276|Drosophila melanogaster capping protei...   264   4e-71
AY069829-1|AAL39974.1|  276|Drosophila melanogaster SD07714p pro...   264   4e-71
AE014134-280|AAF51349.1|  276|Drosophila melanogaster CG17158-PA...   264   4e-71
BT001351-1|AAN71106.1|  758|Drosophila melanogaster AT25963p pro...    30   1.8  
BT001254-1|AAN71010.1|  758|Drosophila melanogaster AT01057p pro...    30   1.8  
AE014297-3441|AAN13975.2|  758|Drosophila melanogaster CG5977-PB...    30   1.8  
AE014297-3440|AAF56223.3|  758|Drosophila melanogaster CG5977-PA...    30   1.8  
AY118687-1|AAM50547.1|  583|Drosophila melanogaster AT15352p pro...    29   5.5  
AY094837-1|AAM11190.1|  890|Drosophila melanogaster LD45081p pro...    28   7.2  
AE014296-3300|AAF49051.1|  890|Drosophila melanogaster CG17149-P...    28   7.2  
AE014296-3299|AAF49052.1|  890|Drosophila melanogaster CG17149-P...    28   7.2  

>U35240-1|AAB38521.1|  276|Drosophila melanogaster capping protein
           beta protein.
          Length = 276

 Score =  264 bits (648), Expect = 4e-71
 Identities = 119/145 (82%), Positives = 132/145 (91%)
 Frame = +2

Query: 113 MSDQQMDCALDLMRRLPPQQIEKNLTDLIDLVPSMCDDLLSLVDQPLKIAQDRSNGKDYL 292
           MS+ QMDCALDLMRRLPPQQIEKNL DLIDL P +C+DLLS VDQPLKIA+D+ +GKDYL
Sbjct: 1   MSEMQMDCALDLMRRLPPQQIEKNLIDLIDLAPDLCEDLLSSVDQPLKIAKDKEHGKDYL 60

Query: 293 LCDYNRDGDSYRSSWSNTYDPPLDDGFMPSERLRKLEIDANLAFDQYREMYFEGGVSSVY 472
           LCDYNRDGDSYRS WSN+Y PPL+DG MPSERLRKLEI+AN AFDQYREMY+EGGVSSVY
Sbjct: 61  LCDYNRDGDSYRSPWSNSYYPPLEDGQMPSERLRKLEIEANYAFDQYREMYYEGGVSSVY 120

Query: 473 LWDMDHGFAGVILIKKAGDGFQKIK 547
           LWD+DHGFA VILIKKAGDG + I+
Sbjct: 121 LWDLDHGFAAVILIKKAGDGSKMIR 145


>AY069829-1|AAL39974.1|  276|Drosophila melanogaster SD07714p
           protein.
          Length = 276

 Score =  264 bits (648), Expect = 4e-71
 Identities = 119/145 (82%), Positives = 132/145 (91%)
 Frame = +2

Query: 113 MSDQQMDCALDLMRRLPPQQIEKNLTDLIDLVPSMCDDLLSLVDQPLKIAQDRSNGKDYL 292
           MS+ QMDCALDLMRRLPPQQIEKNL DLIDL P +C+DLLS VDQPLKIA+D+ +GKDYL
Sbjct: 1   MSEMQMDCALDLMRRLPPQQIEKNLIDLIDLAPDLCEDLLSSVDQPLKIAKDKEHGKDYL 60

Query: 293 LCDYNRDGDSYRSSWSNTYDPPLDDGFMPSERLRKLEIDANLAFDQYREMYFEGGVSSVY 472
           LCDYNRDGDSYRS WSN+Y PPL+DG MPSERLRKLEI+AN AFDQYREMY+EGGVSSVY
Sbjct: 61  LCDYNRDGDSYRSPWSNSYYPPLEDGQMPSERLRKLEIEANYAFDQYREMYYEGGVSSVY 120

Query: 473 LWDMDHGFAGVILIKKAGDGFQKIK 547
           LWD+DHGFA VILIKKAGDG + I+
Sbjct: 121 LWDLDHGFAAVILIKKAGDGSKMIR 145


>AE014134-280|AAF51349.1|  276|Drosophila melanogaster CG17158-PA
           protein.
          Length = 276

 Score =  264 bits (648), Expect = 4e-71
 Identities = 119/145 (82%), Positives = 132/145 (91%)
 Frame = +2

Query: 113 MSDQQMDCALDLMRRLPPQQIEKNLTDLIDLVPSMCDDLLSLVDQPLKIAQDRSNGKDYL 292
           MS+ QMDCALDLMRRLPPQQIEKNL DLIDL P +C+DLLS VDQPLKIA+D+ +GKDYL
Sbjct: 1   MSEMQMDCALDLMRRLPPQQIEKNLIDLIDLAPDLCEDLLSSVDQPLKIAKDKEHGKDYL 60

Query: 293 LCDYNRDGDSYRSSWSNTYDPPLDDGFMPSERLRKLEIDANLAFDQYREMYFEGGVSSVY 472
           LCDYNRDGDSYRS WSN+Y PPL+DG MPSERLRKLEI+AN AFDQYREMY+EGGVSSVY
Sbjct: 61  LCDYNRDGDSYRSPWSNSYYPPLEDGQMPSERLRKLEIEANYAFDQYREMYYEGGVSSVY 120

Query: 473 LWDMDHGFAGVILIKKAGDGFQKIK 547
           LWD+DHGFA VILIKKAGDG + I+
Sbjct: 121 LWDLDHGFAAVILIKKAGDGSKMIR 145


>BT001351-1|AAN71106.1|  758|Drosophila melanogaster AT25963p
           protein.
          Length = 758

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = -1

Query: 341 STKKTYRSHRRDCNRIINSLSRCYDPEQSL 252
           STK  YR HRRDCN  I   +   + +QSL
Sbjct: 147 STKVIYRPHRRDCNIEIVVQNSSKEQQQSL 176


>BT001254-1|AAN71010.1|  758|Drosophila melanogaster AT01057p
           protein.
          Length = 758

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = -1

Query: 341 STKKTYRSHRRDCNRIINSLSRCYDPEQSL 252
           STK  YR HRRDCN  I   +   + +QSL
Sbjct: 147 STKVIYRPHRRDCNIEIVVQNSSKEQQQSL 176


>AE014297-3441|AAN13975.2|  758|Drosophila melanogaster CG5977-PB,
           isoform B protein.
          Length = 758

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = -1

Query: 341 STKKTYRSHRRDCNRIINSLSRCYDPEQSL 252
           STK  YR HRRDCN  I   +   + +QSL
Sbjct: 147 STKVIYRPHRRDCNIEIVVQNSSKEQQQSL 176


>AE014297-3440|AAF56223.3|  758|Drosophila melanogaster CG5977-PA,
           isoform A protein.
          Length = 758

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = -1

Query: 341 STKKTYRSHRRDCNRIINSLSRCYDPEQSL 252
           STK  YR HRRDCN  I   +   + +QSL
Sbjct: 147 STKVIYRPHRRDCNIEIVVQNSSKEQQQSL 176


>AY118687-1|AAM50547.1|  583|Drosophila melanogaster AT15352p
           protein.
          Length = 583

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 14/45 (31%), Positives = 28/45 (62%)
 Frame = +2

Query: 143 DLMRRLPPQQIEKNLTDLIDLVPSMCDDLLSLVDQPLKIAQDRSN 277
           D+  R PP+ ++  ++ L+    +M  DL++L+DQ L + + R+N
Sbjct: 388 DVGGREPPKIVDIQVSRLVTFEENMTTDLINLIDQQLLLTK-RNN 431


>AY094837-1|AAM11190.1|  890|Drosophila melanogaster LD45081p
           protein.
          Length = 890

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +1

Query: 148 DAEAAPS-ADRKEFNRFDRPRSEYV*RPIIISRSASKDCSGS 270
           D+  AP+ +D +  +R +RP+ +Y  RP     +AS D SGS
Sbjct: 59  DSNDAPATSDERRTSRRNRPKVDYSNRPSGSGDTASNDKSGS 100


>AE014296-3300|AAF49051.1|  890|Drosophila melanogaster CG17149-PB,
           isoform B protein.
          Length = 890

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +1

Query: 148 DAEAAPS-ADRKEFNRFDRPRSEYV*RPIIISRSASKDCSGS 270
           D+  AP+ +D +  +R +RP+ +Y  RP     +AS D SGS
Sbjct: 59  DSNDAPATSDERRTSRRNRPKVDYSNRPSGSGDTASNDKSGS 100


>AE014296-3299|AAF49052.1|  890|Drosophila melanogaster CG17149-PA,
           isoform A protein.
          Length = 890

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +1

Query: 148 DAEAAPS-ADRKEFNRFDRPRSEYV*RPIIISRSASKDCSGS 270
           D+  AP+ +D +  +R +RP+ +Y  RP     +AS D SGS
Sbjct: 59  DSNDAPATSDERRTSRRNRPKVDYSNRPSGSGDTASNDKSGS 100


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,916,023
Number of Sequences: 53049
Number of extensions: 483145
Number of successful extensions: 1186
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1186
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)