Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2132
         (718 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-...   109   5e-23
UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    38   0.25 
UniRef50_UPI0000E493A1 Cluster: PREDICTED: similar to phospholip...    34   4.0  
UniRef50_A6GAW1 Cluster: Putative lipoprotein; n=2; Plesiocystis...    33   5.3  
UniRef50_UPI00015B5881 Cluster: PREDICTED: similar to protein ki...    33   7.0  
UniRef50_A6V311 Cluster: Polysaccharide deacetylase; n=7; Pseudo...    33   7.0  

>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
            protein; n=25; Arthropoda|Rep: Endonuclease and reverse
            transcriptase-like protein - Bombyx mori (Silk moth)
          Length = 986

 Score =  109 bits (263), Expect = 5e-23
 Identities = 50/59 (84%), Positives = 53/59 (89%)
 Frame = +2

Query: 398  EELFEMIPSSRF*YRTARHRSRVHPYYLEPLRSSTMRFQRYFLPGTIRLWNELPPRCFP 574
            EELFEMIP+SRF +RTARHRSRVHPYYLEPLRSST+RFQR FLP TIRLWNELP   FP
Sbjct: 893  EELFEMIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFP 951



 Score = 71.7 bits (168), Expect = 2e-11
 Identities = 34/41 (82%), Positives = 35/41 (85%)
 Frame = +1

Query: 556  PPTVFPERYDMSFFKRDLCRVLNGRQWLGSASGIDEVHGRR 678
            P TVFPERYDMSFFKR L RVL+GRQ LGSA GI EVHGRR
Sbjct: 946  PSTVFPERYDMSFFKRGLWRVLSGRQRLGSAPGIAEVHGRR 986


>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
           moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
           hornworm)
          Length = 248

 Score = 37.9 bits (84), Expect = 0.25
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = +2

Query: 668 MGDGNHSPSGGPYARLP 718
           MGDGNHSPSG PYA LP
Sbjct: 1   MGDGNHSPSGRPYASLP 17


>UniRef50_UPI0000E493A1 Cluster: PREDICTED: similar to phospholipase
           C-gamma; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to phospholipase C-gamma -
           Strongylocentrotus purpuratus
          Length = 409

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = -2

Query: 594 EGHVIALGKHRGGSSFQSRMVPGKKYLWKRIVD 496
           EG     GK  GGS FQ+RMV GKK   K + D
Sbjct: 297 EGFNCVAGKDAGGSRFQARMVLGKKVTVKALYD 329


>UniRef50_A6GAW1 Cluster: Putative lipoprotein; n=2; Plesiocystis
           pacifica SIR-1|Rep: Putative lipoprotein - Plesiocystis
           pacifica SIR-1
          Length = 624

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +2

Query: 566 CFPSAMTCPSSNETCVEY*TVGSGLALPLALMKSMGDGNHSPSGG 700
           C  +   CP+  E CV+Y   G GL +P    +   DGN  P  G
Sbjct: 125 CVGAGWQCPTPGEPCVQYPLCGDGLVVP---PEPCDDGNVEPGDG 166


>UniRef50_UPI00015B5881 Cluster: PREDICTED: similar to protein
           kinase c alpha binding protein; n=1; Nasonia
           vitripennis|Rep: PREDICTED: similar to protein kinase c
           alpha binding protein - Nasonia vitripennis
          Length = 541

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 24/94 (25%), Positives = 39/94 (41%)
 Frame = -3

Query: 599 LKKDMS*RSGNTVGGAHSKAGWYLVKNTFGNAL*MTAVALDSMDELYSGGGRCDIKNEMM 420
           ++KD S   G ++GG         +   F N        L++ DEL +  G C      +
Sbjct: 26  IEKDNSNLIGISIGGGAPLCPCLYIVQVFDNTPAAQDGTLEAGDELVAVNGECLKGKTKV 85

Query: 419 ESSRTTPHVTIKFNITWNKLRTVIRPQSKIRIVL 318
           E ++       K +I +NKL   +R    + IVL
Sbjct: 86  EVAKMIQACDTKVSIIYNKLHADVRQGRTLEIVL 119


>UniRef50_A6V311 Cluster: Polysaccharide deacetylase; n=7;
           Pseudomonas|Rep: Polysaccharide deacetylase -
           Pseudomonas aeruginosa PA7
          Length = 933

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
 Frame = -2

Query: 702 GPPDGEWLPSPMDFINARGRAKPLPTV*YSTQVSFEEGHVIALGKHRGGSSFQSRM-VPG 526
           G     W+  P  F++   R  PLP    S   + E G  IA   H  G  F SR  VPG
Sbjct: 471 GSEHRRWILDPFAFLHKALRLAPLP----SPDATTENGRRIAT-VHIDGDGFVSRAEVPG 525

Query: 525 KKYLWKRIVDD 493
             Y  +++++D
Sbjct: 526 SPYAGQQVLED 536


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 750,720,013
Number of Sequences: 1657284
Number of extensions: 15579257
Number of successful extensions: 33883
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 32645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33879
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)