Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2132
         (718 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0166 + 26093618-26095381,26095820-26096039,26096345-260966...    29   4.9  
07_03_1752 - 29218348-29218524,29218593-29218736,29218957-292191...    28   8.5  
04_04_0092 - 22759791-22760676,22761446-22761813,22762202-227622...    28   8.5  
04_04_0089 - 22724971-22725035,22725403-22725466,22725602-227256...    28   8.5  

>05_06_0166 +
           26093618-26095381,26095820-26096039,26096345-26096674,
           26097481-26098029,26098366-26098426,26099737-26099824,
           26100240-26100299
          Length = 1023

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
 Frame = +1

Query: 451 PPE*SSSILSRATAVIYNAFPKVFFTRYHPALE*APPTVFPERYDMSFF-KRDLCRVLNG 627
           PP+ + S++S+   VI  A  +V F    P L+   P +   R    FF K   C ++N 
Sbjct: 482 PPD-TWSVISK---VIERAPRRVVFILISPNLD--LPHIIVSRCQKFFFPKLKECDIVNT 535

Query: 628 RQWLGSASGID 660
            QW+ ++ G+D
Sbjct: 536 LQWISTSEGLD 546


>07_03_1752 -
           29218348-29218524,29218593-29218736,29218957-29219148,
           29219225-29219440,29219873-29220010,29220137-29220232,
           29221204-29221357,29221976-29222098,29222291-29222418,
           29222669-29222773,29223396-29223437,29223631-29223746,
           29223805-29223916
          Length = 580

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
 Frame = -2

Query: 216 TCSSHECLPDEGNRTHDPRRNSRGR*LLHHRVSQQYKHFQIM-FILRTRYLKIDNFNLLT 40
           TC     L DEG +   P   S GR +LH +   ++    ++  I+   Y   + FN + 
Sbjct: 189 TCEKITWLLDEGEKWLKPEYRSCGRSMLHKKAKVEFYPLGVIGAIVSWNYPFHNVFNPML 248

Query: 39  ASSNNANFAV 10
           A+  + N AV
Sbjct: 249 AAIFSGNAAV 258


>04_04_0092 -
           22759791-22760676,22761446-22761813,22762202-22762207,
           22763365-22763603,22764808-22765339
          Length = 676

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 17/32 (53%), Positives = 21/32 (65%)
 Frame = +1

Query: 331 ILLWGRITVRNLFQVILNFIVT*GVVRDDSII 426
           I L+G I VR+L   +LN+IV  G  RDD II
Sbjct: 225 IELYGYIAVRDLQDPLLNYIVKIG--RDDPII 254


>04_04_0089 -
           22724971-22725035,22725403-22725466,22725602-22725688,
           22726775-22726789,22736269-22736685,22738235-22738473,
           22739673-22740223,22740440-22740540
          Length = 512

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 17/32 (53%), Positives = 21/32 (65%)
 Frame = +1

Query: 331 ILLWGRITVRNLFQVILNFIVT*GVVRDDSII 426
           I L+G I VR+L   +LN+IV  G  RDD II
Sbjct: 265 IELYGYIAVRDLQDPLLNYIVKIG--RDDPII 294


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,162,937
Number of Sequences: 37544
Number of extensions: 476749
Number of successful extensions: 1012
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)