Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2131
         (780 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    24   1.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   2.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.4  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   8.4  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   8.4  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 466 KCPYLSPTPLKRKFPLPSRNTSNTQYTYLS 555
           K P  +P+P      LP++ TS +  TY S
Sbjct: 69  KSPQGAPSPSSTPSSLPTQRTSTSNPTYSS 98


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 593 LDFIRYFLFNGVGLRYVY 540
           +DF+R F FNG+ + + Y
Sbjct: 624 IDFLREFQFNGLDVDWEY 641



 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 582 YEVKVHVDKPYEVKV 626
           Y+VK+  D PYE  +
Sbjct: 886 YKVKLEYDGPYETSI 900


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -3

Query: 403 TGTFFTTSTVLMCSW 359
           TG FFT   VLM  W
Sbjct: 426 TGPFFTFCNVLMEMW 440


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 76  FSSLAKATTANDATKITVYFIVVSE 2
           F  ++++T       IT YFIV+ E
Sbjct: 328 FFDISRSTFLGILATITTYFIVIIE 352


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 63  AKEEKGTPKAVEEKKQ 110
           AKE K   K +EEK Q
Sbjct: 210 AKERKQNKKRIEEKSQ 225


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,100
Number of Sequences: 336
Number of extensions: 3102
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)