Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2131
         (780 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    46   2e-06
DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted ...    25   2.0  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    23   8.0  

>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 45.6 bits (103), Expect = 2e-06
 Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
 Frame = +3

Query: 579 PYEVKVHVDKPYEVKVKVPTPYTVEKKIPYEVKVPVP----QPYTVEKKSQFQ*NTKVKV 746
           PY ++V+V++P ++ +    P  +EK +PY V+ P P    +P+ VE   +F+    V V
Sbjct: 197 PYPLQVNVEQPIKIPIYKVIPKVIEKPVPYTVEKPYPIEVEKPFPVEVLKKFE----VPV 252

Query: 747 PQPYEV 764
           P+PY V
Sbjct: 253 PKPYPV 258



 Score = 41.5 bits (93), Expect = 3e-05
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 10/76 (13%)
 Frame = +3

Query: 576 VPYEVKVHVDKPYEVKVKVPTPYTVEKKIPYEVKVPV----------PQPYTVEKKSQFQ 725
           VP+ V + V  P+ VKV +P PY ++  +   +K+P+          P PYTVEK    +
Sbjct: 178 VPHPVPIAV--PHYVKVYIPQPYPLQVNVEQPIKIPIYKVIPKVIEKPVPYTVEKPYPIE 235

Query: 726 *NTKVKVPQPYEVIKK 773
               V+ P P EV+KK
Sbjct: 236 ----VEKPFPVEVLKK 247



 Score = 38.3 bits (85), Expect = 3e-04
 Identities = 24/59 (40%), Positives = 32/59 (54%)
 Frame = +3

Query: 600 VDKPYEVKVKVPTPYTVEKKIPYEVKVPVPQPYTVEKKSQFQ*NTKVKVPQPYEVIKKV 776
           V  P   KV VP P+ V   +P+ VKV +PQPY +    Q      +K+P  Y+VI KV
Sbjct: 166 VPVPVFQKVGVPVPHPVPIAVPHYVKVYIPQPYPL----QVNVEQPIKIP-IYKVIPKV 219



 Score = 35.9 bits (79), Expect = 0.001
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = +3

Query: 600 VDKPYEVKVKVPTPYTVEKKIPYEVKVPVPQPYTVEK 710
           V+KPY ++V+ P P  V KK    V  P P P TV K
Sbjct: 228 VEKPYPIEVEKPFPVEVLKKFEVPVPKPYPVPVTVYK 264


>DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted
           carbonic anhydrase protein.
          Length = 318

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 365 AHQNC*GGKEGACSVYSRETRPLY 436
           AHQ+C G  +   +++S    PLY
Sbjct: 48  AHQSCAGAHQSPIAIHSHRAVPLY 71


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +3

Query: 621 KVKVPTPYTVEKKIPYEVKVPVPQPYTV 704
           K  + TP T EK+ P+  K     PY V
Sbjct: 209 KTPLATPPTKEKRKPFFKKQETSSPYDV 236


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,057
Number of Sequences: 2352
Number of extensions: 13411
Number of successful extensions: 35
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)