Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2130
         (793 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    30   0.021
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   4.3  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   5.7  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   7.5  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   7.5  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   9.9  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 30.3 bits (65), Expect = 0.021
 Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 8/61 (13%)
 Frame = -2

Query: 720 SWLPMKDHG*SLT--------FGHHKPILSTSYI*KQPNIFGVSLEC*DICHRVLSVLKH 565
           +WLP+ ++  SL         + H+    S SY+ KQP I   SLE   I  RVLSV + 
Sbjct: 442 TWLPVNENYKSLNLAAQKREYYSHYVAFKSLSYLKKQPVIANGSLEVDVIDGRVLSVKRE 501

Query: 564 L 562
           L
Sbjct: 502 L 502


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +3

Query: 99  CLKIQR*NKLYKMENNLSENYSRLCGE 179
           C+   + NK++    +L++ Y  LC E
Sbjct: 70  CIGYYKLNKIHDAYKDLNQRYGALCKE 96


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/23 (34%), Positives = 15/23 (65%), Gaps = 4/23 (17%)
 Frame = -1

Query: 553 IKASVNF*PTC----GLYCRIHC 497
           + +S++F   C    G+YCR++C
Sbjct: 195 VSSSISFYVPCIVMLGIYCRLYC 217


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 10/31 (32%), Positives = 12/31 (38%)
 Frame = -2

Query: 594 CHRVLSVLKHLYCQLRHL*TSDPLADCIAEY 502
           C        H YC +R    +DP  D I  Y
Sbjct: 419 CSSFFQQFFHCYCPVRFGRKADPNGDYIRRY 449


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 57  EKNNN*GIKLMTQCCLKIQR 116
           E NNN     M +C L IQ+
Sbjct: 474 EGNNNMAATYMNECLLNIQK 493


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -1

Query: 445 SMCQATTLDKLSALNWRF 392
           + C+ATT+ +   ++W F
Sbjct: 231 AQCEATTMQENDKMSWLF 248


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,922
Number of Sequences: 438
Number of extensions: 4080
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)