Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2129
         (384 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      23   1.4  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   2.4  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   3.2  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   5.6  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   5.6  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   5.6  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   5.6  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   5.6  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   5.6  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    20   9.7  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    20   9.7  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    20   9.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   9.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   9.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   9.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   9.7  

>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 6/26 (23%), Positives = 15/26 (57%)
 Frame = +3

Query: 255 AGVGWTFFDCRGGLACAISVDADGSA 332
           AG  W +++ R  + C++  ++  +A
Sbjct: 80  AGFDWVYYESRAHIHCSVKSESSQAA 105


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -3

Query: 304 AQANPPRQSKKVQ-PTPAPRGRTSAGAPTIS 215
           ++A+P    + V  PT  P   TSA  PT++
Sbjct: 207 SKASPAAAPRSVATPTGIPTPSTSASPPTVN 237


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -3

Query: 106 DIPVPTVQNSAPQPTDPENMEVTENS 29
           +IP   V    PQPT     E T+ S
Sbjct: 390 EIPPEPVPTPEPQPTQTTESEPTQAS 415


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 7   LVSYGPEWSFL 39
           L ++GPEW+ L
Sbjct: 282 LANWGPEWNLL 292


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 7   LVSYGPEWSFL 39
           L ++GPEW+ L
Sbjct: 283 LANWGPEWNLL 293


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 7   LVSYGPEWSFL 39
           L ++GPEW+ L
Sbjct: 283 LANWGPEWNLL 293


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 104 HSGAYSAEFCTTTNR 60
           HSG Y +   TTTN+
Sbjct: 220 HSGLYPSAVDTTTNQ 234


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -3

Query: 94  PTVQNSAPQPTDPENM 47
           P+  +S+P+P  PE++
Sbjct: 285 PSSTSSSPEPRSPESL 300


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 7/30 (23%), Positives = 16/30 (53%)
 Frame = -3

Query: 103 IPVPTVQNSAPQPTDPENMEVTENSTPAHT 14
           +P PT   ++  PT   + E + ++  ++T
Sbjct: 191 LPTPTCSEASSSPTPSHSSESSFSAASSYT 220


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -3

Query: 295 NPPRQSKKVQPTPAPRGRTSAGAPTISRPTSGITT 191
           NPP  +  VQ +    G+ S  +   +  T+G T+
Sbjct: 58  NPPNLNPAVQGSSLTEGKRSKRSKRPNGDTNGDTS 92


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 4/10 (40%), Positives = 8/10 (80%)
 Frame = -2

Query: 263 YSCSPWSHFC 234
           ++  PWS++C
Sbjct: 316 FNAKPWSNYC 325


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 51  FSGSVGCGAEFCTVGT 98
           F  S+ CG   C VGT
Sbjct: 57  FGPSICCGPFGCLVGT 72


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +2

Query: 59  VGWLWCRI 82
           V W+WC I
Sbjct: 129 VAWMWCLI 136


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +2

Query: 59  VGWLWCRI 82
           V W+WC I
Sbjct: 129 VAWMWCLI 136


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +2

Query: 59  VGWLWCRI 82
           V W+WC I
Sbjct: 129 VAWMWCLI 136


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +2

Query: 59  VGWLWCRI 82
           V W+WC I
Sbjct: 129 VAWMWCLI 136


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,249
Number of Sequences: 336
Number of extensions: 1248
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8014124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)