Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2126
         (601 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    24   1.3  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   4.0  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   4.0  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   4.0  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   7.0  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   9.2  

>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +3

Query: 447 LLSIAGYPD*CSG*PAHRLWCLRRCMGC 530
           LL+I    D CSG P+ R      C+GC
Sbjct: 12  LLAIVFLFDKCSGYPSIRQGTTSYCLGC 39


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -1

Query: 88  LMSLALTSFWTKKDTVNYGLQLT 20
           L ++AL  +W   D +NY  + T
Sbjct: 127 LCAIALDRYWAITDPINYAQKRT 149


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -1

Query: 88  LMSLALTSFWTKKDTVNYGLQLT 20
           L ++AL  +W   D +NY  + T
Sbjct: 127 LCAIALDRYWAITDPINYAQKRT 149


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -1

Query: 88  LMSLALTSFWTKKDTVNYGLQLT 20
           L ++AL  +W   D +NY  + T
Sbjct: 127 LCAIALDRYWAITDPINYAQKRT 149


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 95   RLTDESGSYFFLDKERYRKLRITVNL 18
            +LTD     + +D ERY K+ + +NL
Sbjct: 1100 KLTDRLPYPWTMDNERYVKVDMYMNL 1125


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/23 (39%), Positives = 9/23 (39%)
 Frame = -1

Query: 508 HHSRWAGQPEHQSG*PAIDSRAP 440
           HH   A  P HQ   P   S  P
Sbjct: 432 HHHSHAATPHHQHSTPLAHSSYP 454


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,742
Number of Sequences: 438
Number of extensions: 3417
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)