Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2125
         (395 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical pr...    27   6.4  
Z82057-5|CAB04861.3|  325|Caenorhabditis elegans Hypothetical pr...    26   8.5  
Z81142-11|CAB03512.3|  325|Caenorhabditis elegans Hypothetical p...    26   8.5  

>Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical
           protein T16G12.5 protein.
          Length = 1142

 Score = 26.6 bits (56), Expect = 6.4
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -2

Query: 157 HYKKILIQTIYIYSILNLTTDVKNKSLTINSMHACVRQI 41
           +Y    I+ + + S L L+ DVK        + ACV QI
Sbjct: 545 NYSPNFIRNLQLLSQLQLSADVKRTRALSTCLFACVEQI 583


>Z82057-5|CAB04861.3|  325|Caenorhabditis elegans Hypothetical
           protein ZK1037.11 protein.
          Length = 325

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -1

Query: 248 EIRL*LIGIVSFYTIMIVFY 189
           E+   LIGI S YT ++VFY
Sbjct: 119 EVNELLIGIFSIYTFIVVFY 138


>Z81142-11|CAB03512.3|  325|Caenorhabditis elegans Hypothetical
           protein ZK1037.11 protein.
          Length = 325

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -1

Query: 248 EIRL*LIGIVSFYTIMIVFY 189
           E+   LIGI S YT ++VFY
Sbjct: 119 EVNELLIGIFSIYTFIVVFY 138


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,659,336
Number of Sequences: 27780
Number of extensions: 157162
Number of successful extensions: 391
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 391
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 609015246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)