Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2124
(777 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X98559-2|CAA67169.1| 931|Homo sapiens dsRNA adenosine deaminase... 30 8.1
X98559-1|CAA67170.1| 1221|Homo sapiens dsRNA adenosine deaminase... 30 8.1
X79449-1|CAA55968.1| 1226|Homo sapiens IFI-4 protein. 30 8.1
X79448-1|CAA55967.1| 931|Homo sapiens IFI-4 protein. 30 8.1
U75503-3|AAB97117.1| 1181|Homo sapiens RNA adenosine deaminase p... 30 8.1
U75503-2|AAB97116.1| 1200|Homo sapiens RNA adenosine deaminase p... 30 8.1
U75503-1|AAB97118.1| 1226|Homo sapiens RNA adenosine deaminase p... 30 8.1
U18121-1|AAC13782.1| 1226|Homo sapiens p136 protein. 30 8.1
U10439-1|AAB06697.1| 1226|Homo sapiens double-stranded RNA adeno... 30 8.1
BX640741-1|CAE45853.1| 1278|Homo sapiens hypothetical protein pr... 30 8.1
BX538232-1|CAD98075.1| 1257|Homo sapiens hypothetical protein pr... 30 8.1
BC038227-1|AAH38227.1| 1226|Homo sapiens adenosine deaminase, RN... 30 8.1
AL691488-2|CAI17376.1| 1226|Homo sapiens adenosine deaminase, RN... 30 8.1
AL691488-1|CAI17375.1| 931|Homo sapiens adenosine deaminase, RN... 30 8.1
AL606500-2|CAH71908.1| 1226|Homo sapiens adenosine deaminase, RN... 30 8.1
AL606500-1|CAH71907.1| 931|Homo sapiens adenosine deaminase, RN... 30 8.1
AL592078-4|CAI16185.1| 1226|Homo sapiens adenosine deaminase, RN... 30 8.1
AL592078-2|CAI16183.1| 931|Homo sapiens adenosine deaminase, RN... 30 8.1
AB209891-1|BAD93128.1| 1244|Homo sapiens adenosine deaminase, RN... 30 8.1
>X98559-2|CAA67169.1| 931|Homo sapiens dsRNA adenosine deaminase
protein.
Length = 931
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 105 GSTPSTWYFNDQKRLRTLVKRV*INIRFVLPTVPKSFVVLNRN 233
G+TP W+ D+KR R +KR N V T P + RN
Sbjct: 52 GTTPPIWHLTDKKRERMQIKR---NTNSVPETAPAAIPETRRN 91
>X98559-1|CAA67170.1| 1221|Homo sapiens dsRNA adenosine deaminase
protein.
Length = 1221
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 105 GSTPSTWYFNDQKRLRTLVKRV*INIRFVLPTVPKSFVVLNRN 233
G+TP W+ D+KR R +KR N V T P + RN
Sbjct: 342 GTTPPIWHLTDKKRERMQIKR---NTNSVPETAPAAIPETRRN 381
>X79449-1|CAA55968.1| 1226|Homo sapiens IFI-4 protein.
Length = 1226
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 105 GSTPSTWYFNDQKRLRTLVKRV*INIRFVLPTVPKSFVVLNRN 233
G+TP W+ D+KR R +KR N V T P + RN
Sbjct: 347 GTTPPIWHLTDKKRERMQIKR---NTNSVPETAPAAIPETRRN 386
>X79448-1|CAA55967.1| 931|Homo sapiens IFI-4 protein.
Length = 931
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 105 GSTPSTWYFNDQKRLRTLVKRV*INIRFVLPTVPKSFVVLNRN 233
G+TP W+ D+KR R +KR N V T P + RN
Sbjct: 52 GTTPPIWHLTDKKRERMQIKR---NTNSVPETAPAAIPETRRN 91
>U75503-3|AAB97117.1| 1181|Homo sapiens RNA adenosine deaminase
protein.
Length = 1181
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 105 GSTPSTWYFNDQKRLRTLVKRV*INIRFVLPTVPKSFVVLNRN 233
G+TP W+ D+KR R +KR N V T P + RN
Sbjct: 347 GTTPPIWHLTDKKRERMQIKR---NTNSVPETAPAAIPETRRN 386
>U75503-2|AAB97116.1| 1200|Homo sapiens RNA adenosine deaminase
protein.
Length = 1200
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 105 GSTPSTWYFNDQKRLRTLVKRV*INIRFVLPTVPKSFVVLNRN 233
G+TP W+ D+KR R +KR N V T P + RN
Sbjct: 347 GTTPPIWHLTDKKRERMQIKR---NTNSVPETAPAAIPETRRN 386
>U75503-1|AAB97118.1| 1226|Homo sapiens RNA adenosine deaminase
protein.
Length = 1226
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 105 GSTPSTWYFNDQKRLRTLVKRV*INIRFVLPTVPKSFVVLNRN 233
G+TP W+ D+KR R +KR N V T P + RN
Sbjct: 347 GTTPPIWHLTDKKRERMQIKR---NTNSVPETAPAAIPETRRN 386
>U18121-1|AAC13782.1| 1226|Homo sapiens p136 protein.
Length = 1226
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 105 GSTPSTWYFNDQKRLRTLVKRV*INIRFVLPTVPKSFVVLNRN 233
G+TP W+ D+KR R +KR N V T P + RN
Sbjct: 347 GTTPPIWHLTDKKRERMQIKR---NTNSVPETAPAAIPETRRN 386
>U10439-1|AAB06697.1| 1226|Homo sapiens double-stranded RNA
adenosine deaminase protein.
Length = 1226
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 105 GSTPSTWYFNDQKRLRTLVKRV*INIRFVLPTVPKSFVVLNRN 233
G+TP W+ D+KR R +KR N V T P + RN
Sbjct: 347 GTTPPIWHLTDKKRERMQIKR---NTNSVPETAPAAIPETKRN 386
>BX640741-1|CAE45853.1| 1278|Homo sapiens hypothetical protein
protein.
Length = 1278
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 105 GSTPSTWYFNDQKRLRTLVKRV*INIRFVLPTVPKSFVVLNRN 233
G+TP W+ D+KR R +KR N V T P + RN
Sbjct: 378 GTTPPIWHLTDKKRERMQIKR---NTNSVPETAPAAIPETKRN 417
>BX538232-1|CAD98075.1| 1257|Homo sapiens hypothetical protein
protein.
Length = 1257
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 105 GSTPSTWYFNDQKRLRTLVKRV*INIRFVLPTVPKSFVVLNRN 233
G+TP W+ D+KR R +KR N V T P + RN
Sbjct: 378 GTTPPIWHLTDKKRERMQIKR---NTNSVPETAPAAIPETRRN 417
>BC038227-1|AAH38227.1| 1226|Homo sapiens adenosine deaminase,
RNA-specific protein.
Length = 1226
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 105 GSTPSTWYFNDQKRLRTLVKRV*INIRFVLPTVPKSFVVLNRN 233
G+TP W+ D+KR R +KR N V T P + RN
Sbjct: 347 GTTPPIWHLTDKKRERMQIKR---NTNSVPETAPAAIPETKRN 386
>AL691488-2|CAI17376.1| 1226|Homo sapiens adenosine deaminase,
RNA-specific protein.
Length = 1226
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 105 GSTPSTWYFNDQKRLRTLVKRV*INIRFVLPTVPKSFVVLNRN 233
G+TP W+ D+KR R +KR N V T P + RN
Sbjct: 347 GTTPPIWHLTDKKRERMQIKR---NTNSVPETAPAAIPETKRN 386
>AL691488-1|CAI17375.1| 931|Homo sapiens adenosine deaminase,
RNA-specific protein.
Length = 931
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 105 GSTPSTWYFNDQKRLRTLVKRV*INIRFVLPTVPKSFVVLNRN 233
G+TP W+ D+KR R +KR N V T P + RN
Sbjct: 52 GTTPPIWHLTDKKRERMQIKR---NTNSVPETAPAAIPETKRN 91
>AL606500-2|CAH71908.1| 1226|Homo sapiens adenosine deaminase,
RNA-specific protein.
Length = 1226
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 105 GSTPSTWYFNDQKRLRTLVKRV*INIRFVLPTVPKSFVVLNRN 233
G+TP W+ D+KR R +KR N V T P + RN
Sbjct: 347 GTTPPIWHLTDKKRERMQIKR---NTNSVPETAPAAIPETKRN 386
>AL606500-1|CAH71907.1| 931|Homo sapiens adenosine deaminase,
RNA-specific protein.
Length = 931
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 105 GSTPSTWYFNDQKRLRTLVKRV*INIRFVLPTVPKSFVVLNRN 233
G+TP W+ D+KR R +KR N V T P + RN
Sbjct: 52 GTTPPIWHLTDKKRERMQIKR---NTNSVPETAPAAIPETKRN 91
>AL592078-4|CAI16185.1| 1226|Homo sapiens adenosine deaminase,
RNA-specific protein.
Length = 1226
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 105 GSTPSTWYFNDQKRLRTLVKRV*INIRFVLPTVPKSFVVLNRN 233
G+TP W+ D+KR R +KR N V T P + RN
Sbjct: 347 GTTPPIWHLTDKKRERMQIKR---NTNSVPETAPAAIPETKRN 386
>AL592078-2|CAI16183.1| 931|Homo sapiens adenosine deaminase,
RNA-specific protein.
Length = 931
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 105 GSTPSTWYFNDQKRLRTLVKRV*INIRFVLPTVPKSFVVLNRN 233
G+TP W+ D+KR R +KR N V T P + RN
Sbjct: 52 GTTPPIWHLTDKKRERMQIKR---NTNSVPETAPAAIPETKRN 91
>AB209891-1|BAD93128.1| 1244|Homo sapiens adenosine deaminase,
RNA-specific isoform ADAR-a variant protein.
Length = 1244
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 105 GSTPSTWYFNDQKRLRTLVKRV*INIRFVLPTVPKSFVVLNRN 233
G+TP W+ D+KR R +KR N V T P + RN
Sbjct: 365 GTTPPIWHLTDKKRERMQIKR---NTNSVPETAPAAIPETRRN 404
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,071,531
Number of Sequences: 237096
Number of extensions: 1776948
Number of successful extensions: 2476
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2476
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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