Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2117
         (801 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       68   8e-14
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   2.1  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   2.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.8  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    22   6.5  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   6.5  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   8.7  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 68.1 bits (159), Expect = 8e-14
 Identities = 45/155 (29%), Positives = 74/155 (47%)
 Frame = +3

Query: 3   PLPETHHNKFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGA 182
           PLP T      ++  + D  +K+ + YP+   +A+  A+ L++  S    PK +++D G 
Sbjct: 208 PLP-TGRLGASYVFVVIDVFSKFLKLYPLRKATAKIAAKRLIEDFSGYIKPKCVLSDHGT 266

Query: 183 NFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLRT 362
            F S   +   R   I+   +S  HP++    ER    L    R+Y  EN  +W  +L  
Sbjct: 267 QFISNTWQNSLRAADIQPTLSSIRHPES-NPSERVMRELGRIFRAYCRENHASWVNHLSN 325

Query: 363 AMLAYNSNIHSTTGFSPLELLFGFKPYIPKSIDSL 467
                N   H +TGFSP E+L+G  P  P  +D++
Sbjct: 326 IEDCLNYVPHISTGFSPYEILYGRTP--PNPLDAV 358


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +3

Query: 15  THHNKFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVKY 134
           T  + F F      DLTKY    P    + EE A  +V+Y
Sbjct: 247 TDSHSFPFTAESLPDLTKYGAYSPKKVYAPEEVA-EIVEY 285


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 336 HTWDLYLRTAMLAYNSNIHSTTGF 407
           HT ++ ++TAM  Y+ +I ST  F
Sbjct: 160 HTEEIDVKTAMKKYSVDIISTCAF 183


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -2

Query: 311 KIFFQSRMTSF*GATSLRVIWRSKNVF 231
           K   ++ M++F   T +R +W+  N+F
Sbjct: 392 KTVLKTTMSTFSDITFMRTVWKFFNIF 418


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 15/53 (28%), Positives = 21/53 (39%)
 Frame = +3

Query: 234 HIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLRTAMLAYNSNIH 392
           H    PY  + C       STL ++LR +  E  +   L L     + N N H
Sbjct: 72  HSGERPYRCRLCKKAFSDSSTLTKHLRIHSGEKPYECKLCLLRFSQSGNLNRH 124


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 15/53 (28%), Positives = 21/53 (39%)
 Frame = +3

Query: 234 HIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLRTAMLAYNSNIH 392
           H    PY  + C       STL ++LR +  E  +   L L     + N N H
Sbjct: 328 HSGERPYRCRLCKKAFSDSSTLTKHLRIHSGEKPYECKLCLLRFSQSGNLNRH 380


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 9/46 (19%)
 Frame = -2

Query: 332 VFNYIRPKIFFQSRMTSF*-----GATS----LRVIWRSKNVFYSE 222
           +F Y+   I F   +T+F      G TS    L   W SK VFYS+
Sbjct: 190 IFTYMPYNIVFGLCLTTFGLLPVNGVTSEKCNLTFSWYSKKVFYSK 235


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,806
Number of Sequences: 336
Number of extensions: 4013
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)