Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2117
(801 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 98 1e-21
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 98 1e-21
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 98 1e-21
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 98 1e-21
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 98 1e-21
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 98 1e-21
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 98 1e-21
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 98 1e-21
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 98 1e-21
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 98 1e-21
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 98 1e-21
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 31 0.19
SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr 1|||... 28 1.8
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 27 3.1
SPCC4B3.01 ||SPCP25A2.01c|thiosulfate sulfurtransferase|Schizosa... 27 4.1
SPAC6F12.05c |tnr3||thiamine diphosphokinase Tnr3 |Schizosacchar... 26 5.4
SPBC8D2.07c |sfc9||transcription factor TFIIIC complex subunit S... 26 7.2
SPBC651.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 7.2
SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 26 7.2
SPBC1E8.03c |||conserved fungal protein|Schizosaccharomyces pomb... 26 7.2
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 98.3 bits (234), Expect = 1e-21
Identities = 69/242 (28%), Positives = 121/242 (50%), Gaps = 8/242 (3%)
Frame = +3
Query: 6 LPETHHNKFKFILTLQDDLTKYSQAYPMV-TCSAEETARSL-VKYISHIGIPKIIITDQG 179
LPE+ F++ D +K + P + +AE+TAR + I++ G PK II D
Sbjct: 995 LPESSGYNALFVVV--DRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADND 1052
Query: 180 ANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLR 359
F+S+ K + F+ PY PQT G ER++ T+++ LR + +TW ++
Sbjct: 1053 HIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHIS 1112
Query: 360 TAMLAYNSNIHSTTGFSPLELLFGFKPYIPKSIDSLDLNTYSDYIRALNHRLYYSRQKAL 539
+YN+ IHS T +P E++ + P ++ L+L ++SD + Q
Sbjct: 1113 LVQQSYNNAIHSATQMTPFEIVHRYSP----ALSPLELPSFSDKTDENSQETIQVFQTVK 1168
Query: 540 QNIESSKERSKKYYDSHSKPI-TYNIGDMVYVR-----CHHKQNKALSPVWKGPYKSLKI 701
+++ ++ + KKY+D + I + GD+V V+ HK NK L+P + GP+ L+
Sbjct: 1169 EHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGFLHKSNK-LAPSFAGPFYVLQK 1227
Query: 702 NG 707
+G
Sbjct: 1228 SG 1229
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 98.3 bits (234), Expect = 1e-21
Identities = 69/242 (28%), Positives = 121/242 (50%), Gaps = 8/242 (3%)
Frame = +3
Query: 6 LPETHHNKFKFILTLQDDLTKYSQAYPMV-TCSAEETARSL-VKYISHIGIPKIIITDQG 179
LPE+ F++ D +K + P + +AE+TAR + I++ G PK II D
Sbjct: 995 LPESSGYNALFVVV--DRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADND 1052
Query: 180 ANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLR 359
F+S+ K + F+ PY PQT G ER++ T+++ LR + +TW ++
Sbjct: 1053 HIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHIS 1112
Query: 360 TAMLAYNSNIHSTTGFSPLELLFGFKPYIPKSIDSLDLNTYSDYIRALNHRLYYSRQKAL 539
+YN+ IHS T +P E++ + P ++ L+L ++SD + Q
Sbjct: 1113 LVQQSYNNAIHSATQMTPFEIVHRYSP----ALSPLELPSFSDKTDENSQETIQVFQTVK 1168
Query: 540 QNIESSKERSKKYYDSHSKPI-TYNIGDMVYVR-----CHHKQNKALSPVWKGPYKSLKI 701
+++ ++ + KKY+D + I + GD+V V+ HK NK L+P + GP+ L+
Sbjct: 1169 EHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGFLHKSNK-LAPSFAGPFYVLQK 1227
Query: 702 NG 707
+G
Sbjct: 1228 SG 1229
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 98.3 bits (234), Expect = 1e-21
Identities = 69/242 (28%), Positives = 121/242 (50%), Gaps = 8/242 (3%)
Frame = +3
Query: 6 LPETHHNKFKFILTLQDDLTKYSQAYPMV-TCSAEETARSL-VKYISHIGIPKIIITDQG 179
LPE+ F++ D +K + P + +AE+TAR + I++ G PK II D
Sbjct: 995 LPESSGYNALFVVV--DRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADND 1052
Query: 180 ANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLR 359
F+S+ K + F+ PY PQT G ER++ T+++ LR + +TW ++
Sbjct: 1053 HIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHIS 1112
Query: 360 TAMLAYNSNIHSTTGFSPLELLFGFKPYIPKSIDSLDLNTYSDYIRALNHRLYYSRQKAL 539
+YN+ IHS T +P E++ + P ++ L+L ++SD + Q
Sbjct: 1113 LVQQSYNNAIHSATQMTPFEIVHRYSP----ALSPLELPSFSDKTDENSQETIQVFQTVK 1168
Query: 540 QNIESSKERSKKYYDSHSKPI-TYNIGDMVYVR-----CHHKQNKALSPVWKGPYKSLKI 701
+++ ++ + KKY+D + I + GD+V V+ HK NK L+P + GP+ L+
Sbjct: 1169 EHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGFLHKSNK-LAPSFAGPFYVLQK 1227
Query: 702 NG 707
+G
Sbjct: 1228 SG 1229
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 98.3 bits (234), Expect = 1e-21
Identities = 69/242 (28%), Positives = 121/242 (50%), Gaps = 8/242 (3%)
Frame = +3
Query: 6 LPETHHNKFKFILTLQDDLTKYSQAYPMV-TCSAEETARSL-VKYISHIGIPKIIITDQG 179
LPE+ F++ D +K + P + +AE+TAR + I++ G PK II D
Sbjct: 995 LPESSGYNALFVVV--DRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADND 1052
Query: 180 ANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLR 359
F+S+ K + F+ PY PQT G ER++ T+++ LR + +TW ++
Sbjct: 1053 HIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHIS 1112
Query: 360 TAMLAYNSNIHSTTGFSPLELLFGFKPYIPKSIDSLDLNTYSDYIRALNHRLYYSRQKAL 539
+YN+ IHS T +P E++ + P ++ L+L ++SD + Q
Sbjct: 1113 LVQQSYNNAIHSATQMTPFEIVHRYSP----ALSPLELPSFSDKTDENSQETIQVFQTVK 1168
Query: 540 QNIESSKERSKKYYDSHSKPI-TYNIGDMVYVR-----CHHKQNKALSPVWKGPYKSLKI 701
+++ ++ + KKY+D + I + GD+V V+ HK NK L+P + GP+ L+
Sbjct: 1169 EHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGFLHKSNK-LAPSFAGPFYVLQK 1227
Query: 702 NG 707
+G
Sbjct: 1228 SG 1229
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 98.3 bits (234), Expect = 1e-21
Identities = 69/242 (28%), Positives = 121/242 (50%), Gaps = 8/242 (3%)
Frame = +3
Query: 6 LPETHHNKFKFILTLQDDLTKYSQAYPMV-TCSAEETARSL-VKYISHIGIPKIIITDQG 179
LPE+ F++ D +K + P + +AE+TAR + I++ G PK II D
Sbjct: 995 LPESSGYNALFVVV--DRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADND 1052
Query: 180 ANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLR 359
F+S+ K + F+ PY PQT G ER++ T+++ LR + +TW ++
Sbjct: 1053 HIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHIS 1112
Query: 360 TAMLAYNSNIHSTTGFSPLELLFGFKPYIPKSIDSLDLNTYSDYIRALNHRLYYSRQKAL 539
+YN+ IHS T +P E++ + P ++ L+L ++SD + Q
Sbjct: 1113 LVQQSYNNAIHSATQMTPFEIVHRYSP----ALSPLELPSFSDKTDENSQETIQVFQTVK 1168
Query: 540 QNIESSKERSKKYYDSHSKPI-TYNIGDMVYVR-----CHHKQNKALSPVWKGPYKSLKI 701
+++ ++ + KKY+D + I + GD+V V+ HK NK L+P + GP+ L+
Sbjct: 1169 EHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGFLHKSNK-LAPSFAGPFYVLQK 1227
Query: 702 NG 707
+G
Sbjct: 1228 SG 1229
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 98.3 bits (234), Expect = 1e-21
Identities = 69/242 (28%), Positives = 121/242 (50%), Gaps = 8/242 (3%)
Frame = +3
Query: 6 LPETHHNKFKFILTLQDDLTKYSQAYPMV-TCSAEETARSL-VKYISHIGIPKIIITDQG 179
LPE+ F++ D +K + P + +AE+TAR + I++ G PK II D
Sbjct: 995 LPESSGYNALFVVV--DRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADND 1052
Query: 180 ANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLR 359
F+S+ K + F+ PY PQT G ER++ T+++ LR + +TW ++
Sbjct: 1053 HIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHIS 1112
Query: 360 TAMLAYNSNIHSTTGFSPLELLFGFKPYIPKSIDSLDLNTYSDYIRALNHRLYYSRQKAL 539
+YN+ IHS T +P E++ + P ++ L+L ++SD + Q
Sbjct: 1113 LVQQSYNNAIHSATQMTPFEIVHRYSP----ALSPLELPSFSDKTDENSQETIQVFQTVK 1168
Query: 540 QNIESSKERSKKYYDSHSKPI-TYNIGDMVYVR-----CHHKQNKALSPVWKGPYKSLKI 701
+++ ++ + KKY+D + I + GD+V V+ HK NK L+P + GP+ L+
Sbjct: 1169 EHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGFLHKSNK-LAPSFAGPFYVLQK 1227
Query: 702 NG 707
+G
Sbjct: 1228 SG 1229
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 98.3 bits (234), Expect = 1e-21
Identities = 69/242 (28%), Positives = 121/242 (50%), Gaps = 8/242 (3%)
Frame = +3
Query: 6 LPETHHNKFKFILTLQDDLTKYSQAYPMV-TCSAEETARSL-VKYISHIGIPKIIITDQG 179
LPE+ F++ D +K + P + +AE+TAR + I++ G PK II D
Sbjct: 995 LPESSGYNALFVVV--DRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADND 1052
Query: 180 ANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLR 359
F+S+ K + F+ PY PQT G ER++ T+++ LR + +TW ++
Sbjct: 1053 HIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHIS 1112
Query: 360 TAMLAYNSNIHSTTGFSPLELLFGFKPYIPKSIDSLDLNTYSDYIRALNHRLYYSRQKAL 539
+YN+ IHS T +P E++ + P ++ L+L ++SD + Q
Sbjct: 1113 LVQQSYNNAIHSATQMTPFEIVHRYSP----ALSPLELPSFSDKTDENSQETIQVFQTVK 1168
Query: 540 QNIESSKERSKKYYDSHSKPI-TYNIGDMVYVR-----CHHKQNKALSPVWKGPYKSLKI 701
+++ ++ + KKY+D + I + GD+V V+ HK NK L+P + GP+ L+
Sbjct: 1169 EHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGFLHKSNK-LAPSFAGPFYVLQK 1227
Query: 702 NG 707
+G
Sbjct: 1228 SG 1229
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 98.3 bits (234), Expect = 1e-21
Identities = 69/242 (28%), Positives = 121/242 (50%), Gaps = 8/242 (3%)
Frame = +3
Query: 6 LPETHHNKFKFILTLQDDLTKYSQAYPMV-TCSAEETARSL-VKYISHIGIPKIIITDQG 179
LPE+ F++ D +K + P + +AE+TAR + I++ G PK II D
Sbjct: 995 LPESSGYNALFVVV--DRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADND 1052
Query: 180 ANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLR 359
F+S+ K + F+ PY PQT G ER++ T+++ LR + +TW ++
Sbjct: 1053 HIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHIS 1112
Query: 360 TAMLAYNSNIHSTTGFSPLELLFGFKPYIPKSIDSLDLNTYSDYIRALNHRLYYSRQKAL 539
+YN+ IHS T +P E++ + P ++ L+L ++SD + Q
Sbjct: 1113 LVQQSYNNAIHSATQMTPFEIVHRYSP----ALSPLELPSFSDKTDENSQETIQVFQTVK 1168
Query: 540 QNIESSKERSKKYYDSHSKPI-TYNIGDMVYVR-----CHHKQNKALSPVWKGPYKSLKI 701
+++ ++ + KKY+D + I + GD+V V+ HK NK L+P + GP+ L+
Sbjct: 1169 EHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGFLHKSNK-LAPSFAGPFYVLQK 1227
Query: 702 NG 707
+G
Sbjct: 1228 SG 1229
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 98.3 bits (234), Expect = 1e-21
Identities = 69/242 (28%), Positives = 121/242 (50%), Gaps = 8/242 (3%)
Frame = +3
Query: 6 LPETHHNKFKFILTLQDDLTKYSQAYPMV-TCSAEETARSL-VKYISHIGIPKIIITDQG 179
LPE+ F++ D +K + P + +AE+TAR + I++ G PK II D
Sbjct: 995 LPESSGYNALFVVV--DRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADND 1052
Query: 180 ANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLR 359
F+S+ K + F+ PY PQT G ER++ T+++ LR + +TW ++
Sbjct: 1053 HIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHIS 1112
Query: 360 TAMLAYNSNIHSTTGFSPLELLFGFKPYIPKSIDSLDLNTYSDYIRALNHRLYYSRQKAL 539
+YN+ IHS T +P E++ + P ++ L+L ++SD + Q
Sbjct: 1113 LVQQSYNNAIHSATQMTPFEIVHRYSP----ALSPLELPSFSDKTDENSQETIQVFQTVK 1168
Query: 540 QNIESSKERSKKYYDSHSKPI-TYNIGDMVYVR-----CHHKQNKALSPVWKGPYKSLKI 701
+++ ++ + KKY+D + I + GD+V V+ HK NK L+P + GP+ L+
Sbjct: 1169 EHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGFLHKSNK-LAPSFAGPFYVLQK 1227
Query: 702 NG 707
+G
Sbjct: 1228 SG 1229
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 98.3 bits (234), Expect = 1e-21
Identities = 69/242 (28%), Positives = 121/242 (50%), Gaps = 8/242 (3%)
Frame = +3
Query: 6 LPETHHNKFKFILTLQDDLTKYSQAYPMV-TCSAEETARSL-VKYISHIGIPKIIITDQG 179
LPE+ F++ D +K + P + +AE+TAR + I++ G PK II D
Sbjct: 995 LPESSGYNALFVVV--DRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADND 1052
Query: 180 ANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLR 359
F+S+ K + F+ PY PQT G ER++ T+++ LR + +TW ++
Sbjct: 1053 HIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHIS 1112
Query: 360 TAMLAYNSNIHSTTGFSPLELLFGFKPYIPKSIDSLDLNTYSDYIRALNHRLYYSRQKAL 539
+YN+ IHS T +P E++ + P ++ L+L ++SD + Q
Sbjct: 1113 LVQQSYNNAIHSATQMTPFEIVHRYSP----ALSPLELPSFSDKTDENSQETIQVFQTVK 1168
Query: 540 QNIESSKERSKKYYDSHSKPI-TYNIGDMVYVR-----CHHKQNKALSPVWKGPYKSLKI 701
+++ ++ + KKY+D + I + GD+V V+ HK NK L+P + GP+ L+
Sbjct: 1169 EHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGFLHKSNK-LAPSFAGPFYVLQK 1227
Query: 702 NG 707
+G
Sbjct: 1228 SG 1229
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 98.3 bits (234), Expect = 1e-21
Identities = 69/242 (28%), Positives = 121/242 (50%), Gaps = 8/242 (3%)
Frame = +3
Query: 6 LPETHHNKFKFILTLQDDLTKYSQAYPMV-TCSAEETARSL-VKYISHIGIPKIIITDQG 179
LPE+ F++ D +K + P + +AE+TAR + I++ G PK II D
Sbjct: 995 LPESSGYNALFVVV--DRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADND 1052
Query: 180 ANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLR 359
F+S+ K + F+ PY PQT G ER++ T+++ LR + +TW ++
Sbjct: 1053 HIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHIS 1112
Query: 360 TAMLAYNSNIHSTTGFSPLELLFGFKPYIPKSIDSLDLNTYSDYIRALNHRLYYSRQKAL 539
+YN+ IHS T +P E++ + P ++ L+L ++SD + Q
Sbjct: 1113 LVQQSYNNAIHSATQMTPFEIVHRYSP----ALSPLELPSFSDKTDENSQETIQVFQTVK 1168
Query: 540 QNIESSKERSKKYYDSHSKPI-TYNIGDMVYVR-----CHHKQNKALSPVWKGPYKSLKI 701
+++ ++ + KKY+D + I + GD+V V+ HK NK L+P + GP+ L+
Sbjct: 1169 EHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGFLHKSNK-LAPSFAGPFYVLQK 1227
Query: 702 NG 707
+G
Sbjct: 1228 SG 1229
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 31.1 bits (67), Expect = 0.19
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -3
Query: 424 NSSNGEKPVVEWILELYASIAVLRYKSHVCWFS 326
N+SN EK +WI+ IA+ RYK H FS
Sbjct: 610 NTSNDEKETAQWIVSFTGDIALSRYK-HFSKFS 641
>SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 504
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 110 FFGGACDHGICLRIFSEIVL*RKNEFEFVMVC 15
FF CDH CL + + + R +E E V+ C
Sbjct: 142 FFSAECDHEFCLACYRQYLDSRISEGESVIQC 173
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 27.1 bits (57), Expect = 3.1
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 300 KEYLRSYIVENQHTWDLYLRTAMLAYNSNIHSTTGFSPLE 419
KEYL S+I EN H D+Y ++ N+ S +G S ++
Sbjct: 3 KEYLVSHIEENAHQADIY---SLNVVAGNLWSASGDSKIK 39
>SPCC4B3.01 ||SPCP25A2.01c|thiosulfate
sulfurtransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 298
Score = 26.6 bits (56), Expect = 4.1
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +3
Query: 114 ARSLVKYISHIGIPK---IIITDQGANFSSEVMKQLERLFGIKHIFASP 251
A Y+ +GI + +II D+ FSS + ++FG +H+F P
Sbjct: 78 ADEFASYVGKLGIDRNTNVIIYDRKGFFSSPRVFWTFKVFGHEHVFLFP 126
>SPAC6F12.05c |tnr3||thiamine diphosphokinase Tnr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 222 FGIKHIFASPYHPQTCGALERSHSTL 299
F I+H +P HPQ LER H L
Sbjct: 277 FLIRHGIITPQHPQYLQTLERIHRPL 302
>SPBC8D2.07c |sfc9||transcription factor TFIIIC complex subunit Sfc9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 673
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +3
Query: 381 SNIHSTTGFSPLELLFGFKPYIPKSIDSLDLNT 479
SN++ + + + LL+G+ Y K++D+ LN+
Sbjct: 491 SNLYLDSSLNAMRLLYGWSVYKQKALDATLLNS 523
>SPBC651.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 237
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 378 NSNIHSTTGFSPLELLFGFKPYIPKSID 461
++N T GF P+ +F PY P S +
Sbjct: 203 DTNELKTNGFEPIRFVFTTTPYSPASFE 230
>SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 841
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +3
Query: 480 YSDYIRALNHRLYYSRQKALQNIESSKERS---KKYYDSHSKPITYNI 614
Y ++R + KA ++++K+ + K YYD H+KP NI
Sbjct: 47 YDYHVRPYGTVVQSQIAKASPIVDAAKQATVNVKSYYDEHAKPKVENI 94
>SPBC1E8.03c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 477
Score = 25.8 bits (54), Expect = 7.2
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +3
Query: 264 TCGALERSHSTLKEYLRSYIVENQHTWDLYLRTAMLAYNSNIHSTTGFSPLELLFGFKPY 443
TC S+ST E L ++ L + A+LA + ++ T+ SPL + PY
Sbjct: 154 TCPLSFLSYSTGVERLSKELILKD-LLSLQFQQALLAISPSVIVTSEHSPLVMFQAINPY 212
Query: 444 IPKSI---DSLDLNTYSD 488
+ + D++D N +
Sbjct: 213 LNNNYYTHDTVDTNALEE 230
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,256,852
Number of Sequences: 5004
Number of extensions: 68231
Number of successful extensions: 231
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 231
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 388424860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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