Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2117
(801 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB040899-1|BAA95990.1| 505|Homo sapiens KIAA1466 protein protein. 79 1e-14
AK000132-1|BAA90963.1| 392|Homo sapiens protein ( Homo sapiens ... 77 7e-14
BC033390-1|AAH33390.1| 439|Homo sapiens KRBA2 protein protein. 73 2e-12
AK131219-1|BAD18406.1| 492|Homo sapiens protein ( Homo sapiens ... 73 2e-12
AK131226-1|BAD18411.1| 194|Homo sapiens protein ( Homo sapiens ... 54 6e-07
BC111741-1|AAI11742.1| 1325|Homo sapiens zinc finger protein 452... 50 1e-05
BC110834-1|AAI10835.1| 1325|Homo sapiens zinc finger protein 452... 50 1e-05
AY517631-1|AAS01734.1| 1325|Homo sapiens zinc finger protein 452... 50 1e-05
AL671879-1|CAI17641.2| 794|Homo sapiens zinc finger protein 452... 50 1e-05
AK056369-1|BAB71166.1| 782|Homo sapiens protein ( Homo sapiens ... 50 1e-05
AB067512-1|BAB67818.1| 1147|Homo sapiens KIAA1925 protein protein. 50 1e-05
BC111742-1|AAI11743.1| 1325|Homo sapiens zinc finger protein 452... 50 1e-05
AK057704-1|BAB71549.1| 120|Homo sapiens protein ( Homo sapiens ... 48 4e-05
AF499232-2|AAP29639.1| 1183|Homo sapiens pol protein protein. 44 8e-04
AF333072-2|AAL60056.1| 702|Homo sapiens pol protein protein. 42 0.003
AF298588-1|AAK11554.1| 956|Homo sapiens polymerase protein. 41 0.005
M14123-4|AAA88033.1| 1361|Homo sapiens protein ( Human endogenou... 40 0.010
AY186778-1|AAO27434.1| 727|Homo sapiens polymerase protein. 40 0.010
AF298587-1|AAK11553.1| 956|Homo sapiens polymerase protein. 40 0.010
AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein pro... 40 0.010
AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein pro... 40 0.010
AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein... 40 0.010
AF074086-7|AAD21097.1| 956|Homo sapiens polymerase protein. 40 0.010
AF074086-3|AAF88167.1| 956|Homo sapiens polymerase protein. 40 0.010
AK131478-1|BAD18623.1| 266|Homo sapiens protein ( Homo sapiens ... 40 0.014
AK131330-1|BAD18490.1| 153|Homo sapiens protein ( Homo sapiens ... 39 0.018
AF480924-3|AAM81188.1| 863|Homo sapiens pol protein protein. 34 0.69
BC078154-1|AAH78154.1| 595|Homo sapiens zinc finger protein 317... 33 0.91
AK131351-1|BAD18506.1| 149|Homo sapiens PRECURSOR (EC 1.3.5.1).... 33 0.91
AF307097-1|AAL29191.1| 510|Homo sapiens ZNF317-4 protein protein. 33 0.91
AF307096-1|AAL29190.1| 478|Homo sapiens ZNF317-3 protein protein. 33 0.91
AF275255-1|AAL29188.1| 595|Homo sapiens ZNF317-2 protein protein. 33 0.91
AF148135-1|AAL29182.1| 563|Homo sapiens ZNF317-1 protein protein. 33 0.91
AB046808-1|BAB13414.1| 613|Homo sapiens KIAA1588 protein protein. 33 0.91
BC093825-1|AAH93825.1| 1037|Homo sapiens caspase recruitment dom... 30 8.5
AF356193-1|AAK32718.1| 1037|Homo sapiens caspase recruitment dom... 30 8.5
AB209844-1|BAD93081.1| 872|Homo sapiens caspase recruitment dom... 30 8.5
>AB040899-1|BAA95990.1| 505|Homo sapiens KIAA1466 protein protein.
Length = 505
Score = 79.4 bits (187), Expect = 1e-14
Identities = 65/221 (29%), Positives = 103/221 (46%), Gaps = 3/221 (1%)
Frame = +3
Query: 30 FKFILTLQDDLTKYSQAYPMVTCSAEETARSLVK-YISHIGIPKIIITDQGANFSSEVMK 206
++++L + + +A+P A+E R L+K I G+P + +D G F +EV++
Sbjct: 293 YQYMLVFVCTFSGWVEAFPTRIEKAQEVTRLLLKDIIPRFGLPLTLGSDNGPAFMAEVVQ 352
Query: 207 QLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLRTAMLAYNSN 386
QL +L IK YHPQ+ G ++ + TLK L+ + E WD L A L
Sbjct: 353 QLSQLLKIKWKLHIVYHPQSSGKVQWMNQTLKHLLK-FCQEPHLRWDQVLPMAFLQVRCT 411
Query: 387 IHSTTGFSPLELLFGFKPYIPKSIDSLDLNTYSDYIRALNHRLYYSRQKALQNIESSKER 566
+ TG SP E++FG P I + DL + R + A+Q I
Sbjct: 412 LTKLTGLSPCEIVFGRPPPIINQVKG-DLWELGELTL---KRQMQALGLAMQKIHGWVR- 466
Query: 567 SKKYYDSHSKPI-TYNIGDMVYVRCHHKQN-KALSPVWKGP 683
+K S + P+ + GD+V+V+ K N L P+W GP
Sbjct: 467 -EKLPISLTDPVHPFTPGDLVWVK---KWNPTTLGPIWDGP 503
>AK000132-1|BAA90963.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ20125 fis, clone COL06152. ).
Length = 392
Score = 77.0 bits (181), Expect = 7e-14
Identities = 43/151 (28%), Positives = 75/151 (49%)
Frame = +3
Query: 15 THHNKFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSS 194
T + + + + D TK+ P+ SA E +++++ G P+ II DQ F
Sbjct: 153 TSNRSHVYAIIMTDLFTKWIVILPLCDVSASEVSKAIINIFFLYGPPQKIIMDQRDEFIQ 212
Query: 195 EVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLRTAMLA 374
++ +L RLFGIK I S + T +E + +T+K +L + ++ + WD +L A
Sbjct: 213 QINIELYRLFGIKQIVIS-HTSGTVNPMESTPNTIKAFLSKHCADHPNNWDDHLSAVSFA 271
Query: 375 YNSNIHSTTGFSPLELLFGFKPYIPKSIDSL 467
+N T +P +F PY+P++ DSL
Sbjct: 272 FNVTHLEPTKNTPYFQMFSRNPYMPETSDSL 302
>BC033390-1|AAH33390.1| 439|Homo sapiens KRBA2 protein protein.
Length = 439
Score = 72.5 bits (170), Expect = 2e-12
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 2/139 (1%)
Frame = +3
Query: 27 KFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSSEVMK 206
+FKFIL QD TK+ P+ T A E L+ + +G P ++ +D G F+++V+
Sbjct: 224 EFKFILYYQDHSTKFIILRPLRTKQAHEVVSVLLDIFTILGTPSVLDSDSGVEFTNQVVH 283
Query: 207 QLERLFGIKHIFASPYHP-QTCGALERSHSTLKEYLRSYIVENQHT-WDLYLRTAMLAYN 380
+L L+ I + YHP Q+ G+LE + +K + +++ N W LR + N
Sbjct: 284 ELNELWPDLKIVSGKYHPGQSQGSLEGASRDVKNMISTWMQSNHSCHWAKGLRFMQMVRN 343
Query: 381 SNIHSTTGFSPLELLFGFK 437
+ SP E +FG+K
Sbjct: 344 QAFDVSLQQSPFEAMFGYK 362
>AK131219-1|BAD18406.1| 492|Homo sapiens protein ( Homo sapiens
cDNA FLJ16113 fis, clone 3NB692004724. ).
Length = 492
Score = 72.5 bits (170), Expect = 2e-12
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 2/139 (1%)
Frame = +3
Query: 27 KFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSSEVMK 206
+FKFIL QD TK+ P+ T A E L+ + +G P ++ +D G F+++V+
Sbjct: 277 EFKFILYYQDHSTKFIILRPLRTKQAHEVVSVLLDIFTILGTPSVLDSDSGVEFTNQVVH 336
Query: 207 QLERLFGIKHIFASPYHP-QTCGALERSHSTLKEYLRSYIVENQHT-WDLYLRTAMLAYN 380
+L L+ I + YHP Q+ G+LE + +K + +++ N W LR + N
Sbjct: 337 ELNELWPDLKIVSGKYHPGQSQGSLEGASRDVKNMISTWMQSNHSCHWAKGLRFMQMVRN 396
Query: 381 SNIHSTTGFSPLELLFGFK 437
+ SP E +FG+K
Sbjct: 397 QAFDVSLQQSPFEAMFGYK 415
>AK131226-1|BAD18411.1| 194|Homo sapiens protein ( Homo sapiens
cDNA FLJ16127 fis, clone BRACE2037299. ).
Length = 194
Score = 54.0 bits (124), Expect = 6e-07
Identities = 31/95 (32%), Positives = 47/95 (49%)
Frame = +3
Query: 204 KQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLRTAMLAYNS 383
KQ RL F PYHP + G +ER++ LK +L ++ + W L A+L +
Sbjct: 11 KQSPRLSASSGNFIPPYHPSSLGKVERTNGLLKTHLTKLSLQLKKDWTALLPFALLRIRA 70
Query: 384 NIHSTTGFSPLELLFGFKPYIPKSIDSLDLNTYSD 488
TG+SP EL +G + ++ L NTY+D
Sbjct: 71 YPQEATGYSPFELSYGCTFLLGPNL--LTDNTYAD 103
>BC111741-1|AAI11742.1| 1325|Homo sapiens zinc finger protein 452
protein.
Length = 1325
Score = 50.0 bits (114), Expect = 1e-05
Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 1/135 (0%)
Frame = +3
Query: 27 KFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSSEVMK 206
+++FIL QD TK + + + E A +L+ + IG P ++ +D G FSS+V+
Sbjct: 389 EYRFILHYQDLCTKLTFLRSLKSKRPTEVAHALLDIFTIIGAPSVLQSDNGREFSSQVVS 448
Query: 207 QLERLF-GIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLRTAMLAYNS 383
+L ++ +K + Q+ + E++ K N W +L ++ N
Sbjct: 449 ELSNIWPELKIVHGKSQTCQSQSSAEQTEDIRKRIFSWMQTNNSSHWTEFLWFIQMSQNQ 508
Query: 384 NIHSTTGFSPLELLF 428
H + +P E F
Sbjct: 509 PYHRSMQQTPCESAF 523
>BC110834-1|AAI10835.1| 1325|Homo sapiens zinc finger protein 452
protein.
Length = 1325
Score = 50.0 bits (114), Expect = 1e-05
Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 1/135 (0%)
Frame = +3
Query: 27 KFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSSEVMK 206
+++FIL QD TK + + + E A +L+ + IG P ++ +D G FSS+V+
Sbjct: 389 EYRFILHYQDLCTKLTFLRSLKSKRPTEVAHALLDIFTIIGAPSVLQSDNGREFSSQVVS 448
Query: 207 QLERLF-GIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLRTAMLAYNS 383
+L ++ +K + Q+ + E++ K N W +L ++ N
Sbjct: 449 ELSNIWPELKIVHGKSQTCQSQSSAEQTEDIRKRIFSWMQTNNSSHWTEFLWFIQMSQNQ 508
Query: 384 NIHSTTGFSPLELLF 428
H + +P E F
Sbjct: 509 PYHRSMQQTPCESAF 523
>AY517631-1|AAS01734.1| 1325|Homo sapiens zinc finger protein 452
protein.
Length = 1325
Score = 50.0 bits (114), Expect = 1e-05
Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 1/135 (0%)
Frame = +3
Query: 27 KFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSSEVMK 206
+++FIL QD TK + + + E A +L+ + IG P ++ +D G FSS+V+
Sbjct: 389 EYRFILHYQDLCTKLTFLRSLKSKRPTEVAHALLDIFTIIGAPSVLQSDNGREFSSQVVS 448
Query: 207 QLERLF-GIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLRTAMLAYNS 383
+L ++ +K + Q+ + E++ K N W +L ++ N
Sbjct: 449 ELSNIWPELKIVHGKSQTCQSQSSAEQTEDIRKRIFSWMQTNNSSHWTEFLWFIQMSQNQ 508
Query: 384 NIHSTTGFSPLELLF 428
H + +P E F
Sbjct: 509 PYHRSMQQTPCESAF 523
>AL671879-1|CAI17641.2| 794|Homo sapiens zinc finger protein 452
protein.
Length = 794
Score = 50.0 bits (114), Expect = 1e-05
Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 1/135 (0%)
Frame = +3
Query: 27 KFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSSEVMK 206
+++FIL QD TK + + + E A +L+ + IG P ++ +D G FSS+V+
Sbjct: 389 EYRFILHYQDLCTKLTFLRSLKSKRPTEVAHALLDIFTIIGAPSVLQSDNGREFSSQVVS 448
Query: 207 QLERLF-GIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLRTAMLAYNS 383
+L ++ +K + Q+ + E++ K N W +L ++ N
Sbjct: 449 ELSNIWPELKIVHGKSQTCQSQSSAEQTEDIRKRIFSWMQTNNSSHWTEFLWFIQMSQNQ 508
Query: 384 NIHSTTGFSPLELLF 428
H + +P E F
Sbjct: 509 PYHRSMQQTPCESAF 523
>AK056369-1|BAB71166.1| 782|Homo sapiens protein ( Homo sapiens
cDNA FLJ31807 fis, clone NT2RI2009215, moderately
similar to ZINC FINGER PROTEIN 165. ).
Length = 782
Score = 50.0 bits (114), Expect = 1e-05
Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 1/135 (0%)
Frame = +3
Query: 27 KFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSSEVMK 206
+++FIL QD TK + + + E A +L+ + IG P ++ +D G FSS+V+
Sbjct: 389 EYRFILHYQDLCTKLTFLRSLKSKRPTEVAHALLDIFTIIGAPSVLQSDNGREFSSQVVS 448
Query: 207 QLERLF-GIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLRTAMLAYNS 383
+L ++ +K + Q+ + E++ K N W +L ++ N
Sbjct: 449 ELSNIWPELKIVHGKSQTCQSQSSAEQTEDIRKRIFSWMQTNNSSHWTEFLWFIQMSQNQ 508
Query: 384 NIHSTTGFSPLELLF 428
H + +P E F
Sbjct: 509 PYHRSMQQTPCESAF 523
>AB067512-1|BAB67818.1| 1147|Homo sapiens KIAA1925 protein protein.
Length = 1147
Score = 50.0 bits (114), Expect = 1e-05
Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 1/135 (0%)
Frame = +3
Query: 27 KFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSSEVMK 206
+++FIL QD TK + + + E A +L+ + IG P ++ +D G FSS+V+
Sbjct: 211 EYRFILHYQDLCTKLTFLRSLKSKRPTEVAHALLDIFTIIGAPSVLQSDNGREFSSQVVS 270
Query: 207 QLERLF-GIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLRTAMLAYNS 383
+L ++ +K + Q+ + E++ K N W +L ++ N
Sbjct: 271 ELSNIWPELKIVHGKSQTCQSQSSAEQTEDIRKRIFSWMQTNNSSHWTEFLWFIQMSQNQ 330
Query: 384 NIHSTTGFSPLELLF 428
H + +P E F
Sbjct: 331 PYHRSMQQTPCESAF 345
>BC111742-1|AAI11743.1| 1325|Homo sapiens zinc finger protein 452
protein.
Length = 1325
Score = 49.6 bits (113), Expect = 1e-05
Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 1/135 (0%)
Frame = +3
Query: 27 KFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSSEVMK 206
+++FIL QD TK + + + E A +L+ + IG P ++ +D G FSS+V+
Sbjct: 389 EYRFILHYQDLCTKLTFLRSLKSKRPTEVAHALLDIFTIIGAPSVLQSDNGREFSSQVVS 448
Query: 207 QLERLF-GIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLRTAMLAYNS 383
+L ++ +K + Q+ + E++ K N W +L ++ N
Sbjct: 449 ELSNIWPELKIVHGKSKTCQSQSSAEQTEDIRKRIFSWMQTNNSSHWTEFLWFIQMSQNQ 508
Query: 384 NIHSTTGFSPLELLF 428
H + +P E F
Sbjct: 509 PYHRSMQQTPCESAF 523
>AK057704-1|BAB71549.1| 120|Homo sapiens protein ( Homo sapiens
cDNA FLJ33142 fis, clone UTERU1000192. ).
Length = 120
Score = 48.0 bits (109), Expect = 4e-05
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Frame = +3
Query: 33 KFILTLQDDLTKYSQAYPMVTCSAEETARSLVK-YISHIGIPKIIITDQGANFSSEVMKQ 209
K++L L + +AYP +T A E L++ I G+P I +D G F ++++++
Sbjct: 8 KYLLVLLCTYCGWVEAYPTLTEKAREVTCVLLRDLIPRFGLPLRISSDNGLTFVADLVQK 67
Query: 210 LERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTW 344
+ ++ GI + Y PQ+ E+ + T+K L E W
Sbjct: 68 IAKVLGIIWKLHAAYRPQSSRKAEQMNQTIKNSLGKVCQETGLKW 112
>AF499232-2|AAP29639.1| 1183|Homo sapiens pol protein protein.
Length = 1183
Score = 43.6 bits (98), Expect = 8e-04
Identities = 26/108 (24%), Positives = 48/108 (44%)
Frame = +3
Query: 135 ISHIGIPKIIITDQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLR 314
I G+P I +D G F ++++++ ++ G + Y PQ+ G +E+ + T+K
Sbjct: 948 IPRFGLPLRIGSDNGPAFVADLVQKRAKVLGNTWKLHAAYRPQSSGKVEQMNWTIKNSKG 1007
Query: 315 SYIVENQHTWDLYLRTAMLAYNSNIHSTTGFSPLELLFGFKPYIPKSI 458
E W L + TG+SP E+L+ P I + +
Sbjct: 1008 KVCQETGLKWIQALPMVLFKIRCTPSKRTGYSPYEILYHRPPPILRGL 1055
>AF333072-2|AAL60056.1| 702|Homo sapiens pol protein protein.
Length = 702
Score = 41.9 bits (94), Expect = 0.003
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Frame = +3
Query: 15 THHNKFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYI----SHIGIPKIIITDQGA 182
TH F + + + YS + TC E+ + K++ + +G+PK I TD G
Sbjct: 545 THVPSFGKLSYVHVTVDTYSH-FMWATCQTGESTSHVKKHLLSCFAVMGVPKKIKTDNGP 603
Query: 183 NFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYL 311
+ S+ ++ + I H PY+ Q +ER++ TLK L
Sbjct: 604 GYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQL 646
>AF298588-1|AAK11554.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 41.1 bits (92), Expect = 0.005
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Frame = +3
Query: 15 THHNKFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYI----SHIGIPKIIITDQGA 182
TH F+ + + + YS + TC E+ + K++ + +G+P+ I TD G
Sbjct: 655 THVPSFERLSYVHVTVDTYSH-FIWATCQTGESTSHVKKHLLSCFAVMGVPEKIKTDNGP 713
Query: 183 NFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYL 311
+ S+ ++ + I H PY+ Q +ER++ TLK L
Sbjct: 714 GYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQL 756
>M14123-4|AAA88033.1| 1361|Homo sapiens protein ( Human endogenous
retrovirus HERV-K10. ).
Length = 1361
Score = 39.9 bits (89), Expect = 0.010
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Frame = +3
Query: 15 THHNKFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYI----SHIGIPKIIITDQGA 182
TH F + + + YS + TC E+ + K++ + +G+P+ I TD G
Sbjct: 557 THVPSFGRLSYVHVTVDTYSH-FIWATCQTGESTSHVKKHLLSCFAVMGVPEKIKTDNGP 615
Query: 183 NFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYL 311
+ S+ ++ + I H PY+ Q +ER++ TLK L
Sbjct: 616 GYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQL 658
>AY186778-1|AAO27434.1| 727|Homo sapiens polymerase protein.
Length = 727
Score = 39.9 bits (89), Expect = 0.010
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Frame = +3
Query: 15 THHNKFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYI----SHIGIPKIIITDQGA 182
TH F + + + YS + TC E+ + K++ + +G+P+ I TD G
Sbjct: 518 THVPSFGRLSYVHVTVDTYSH-FIWATCQTGESTSHVKKHLLSCFAVMGVPEKIKTDNGP 576
Query: 183 NFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYL 311
+ S+ ++ + I H PY+ Q +ER++ TLK L
Sbjct: 577 GYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQL 619
>AF298587-1|AAK11553.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 39.9 bits (89), Expect = 0.010
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Frame = +3
Query: 15 THHNKFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYI----SHIGIPKIIITDQGA 182
TH F + + + YS + TC E+ + K++ + +G+P+ I TD G
Sbjct: 655 THVPSFGRLSYVHVTVDTYSH-FIWATCQTGESTSHVKKHLLSCFAVMGVPEKIKTDNGP 713
Query: 183 NFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYL 311
+ S+ ++ + I H PY+ Q +ER++ TLK L
Sbjct: 714 GYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQL 756
>AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein protein.
Length = 1879
Score = 39.9 bits (89), Expect = 0.010
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Frame = +3
Query: 15 THHNKFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYI----SHIGIPKIIITDQGA 182
TH F + + + YS + TC E+ + K++ + +G+P+ I TD G
Sbjct: 1578 THVPSFGRLSYVHVTVDTYSH-FIWATCQTGESTSHVKKHLLSCFAVMGVPEKIKTDNGP 1636
Query: 183 NFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYL 311
+ S+ ++ + I H PY+ Q +ER++ TLK L
Sbjct: 1637 GYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQL 1679
>AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein protein.
Length = 1755
Score = 39.9 bits (89), Expect = 0.010
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Frame = +3
Query: 57 DLTKYSQAYPMVTCSAEETARSLVKYI----SHIGIPKIIITDQGANFSSEVMKQLERLF 224
D YS + TC E+ + K++ + +G+P+ I TD G + S+ ++ +
Sbjct: 1594 DTYSYSH-FIWATCQTGESTSHVKKHLLSCFAVMGVPEKIKTDNGPGYCSKAFQKFLSQW 1652
Query: 225 GIKHIFASPYHPQTCGALERSHSTLKEYL 311
I H PY+ Q +ER++ TLK L
Sbjct: 1653 KISHTTGIPYNSQGQAIVERTNRTLKTQL 1681
>AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein
protein.
Length = 2294
Score = 39.9 bits (89), Expect = 0.010
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Frame = +3
Query: 15 THHNKFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYI----SHIGIPKIIITDQGA 182
TH F + + + YS + TC E+ + K++ + +G+P+ I TD G
Sbjct: 1578 THVPSFGRLSYVHVTVDTYSH-FIWATCQTGESTSHVKKHLLSCFAVMGVPEKIKTDNGP 1636
Query: 183 NFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYL 311
+ S+ ++ + I H PY+ Q +ER++ TLK L
Sbjct: 1637 GYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQL 1679
>AF074086-7|AAD21097.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 39.9 bits (89), Expect = 0.010
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Frame = +3
Query: 15 THHNKFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYI----SHIGIPKIIITDQGA 182
TH F + + + YS + TC E+ + K++ + +G+P+ I TD G
Sbjct: 655 THVPSFGRLSYVHVTVDTYSH-FIWATCQTGESTSHVKKHLLSCFAVMGVPEKIKTDNGP 713
Query: 183 NFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYL 311
+ S+ ++ + I H PY+ Q +ER++ TLK L
Sbjct: 714 GYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQL 756
>AF074086-3|AAF88167.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 39.9 bits (89), Expect = 0.010
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Frame = +3
Query: 15 THHNKFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYI----SHIGIPKIIITDQGA 182
TH F + + + YS + TC E+ + K++ + +G+P+ I TD G
Sbjct: 655 THVPSFGRLSYVHVTVDTYSH-FIWATCQTGESTSHVKKHLLSCFAVMGVPEKIKTDNGP 713
Query: 183 NFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYL 311
+ S+ ++ + I H PY+ Q +ER++ TLK L
Sbjct: 714 GYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQL 756
>AK131478-1|BAD18623.1| 266|Homo sapiens protein ( Homo sapiens
cDNA FLJ16646 fis, clone TESTI4032090. ).
Length = 266
Score = 39.5 bits (88), Expect = 0.014
Identities = 24/79 (30%), Positives = 39/79 (49%)
Frame = +3
Query: 99 SAEETARSLVKYISHIGIPKIIITDQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGAL 278
S+ R L++ IGI I TD ++S+ + + IKHI PY+ Q +
Sbjct: 175 SSAYVKRHLLQCFVVIGILASIKTDNAPGYTSQALATFFSIRNIKHITGIPYNSQGQAIV 234
Query: 279 ERSHSTLKEYLRSYIVENQ 335
ER + +LK+ L+ EN+
Sbjct: 235 ERMNLSLKQQLQKQKGENR 253
>AK131330-1|BAD18490.1| 153|Homo sapiens protein ( Homo sapiens
cDNA FLJ16337 fis, clone TESTI1000266. ).
Length = 153
Score = 39.1 bits (87), Expect = 0.018
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Frame = +3
Query: 117 RSLVKYISHIGIPKIIITDQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHST 296
+ L+ + +G P I T+ ++S +Q ++ I+H PY+PQ +E +HST
Sbjct: 62 KHLLLTFAFMGQPTKIKTNNDLAYASSQFQQFCHMWNIQHSTGIPYNPQGQAIVECAHST 121
Query: 297 LKEYLRS-----YIVENQHTW 344
LK L+ ++ QH W
Sbjct: 122 LKNMLKKQKRGVWVRTLQHYW 142
>AF480924-3|AAM81188.1| 863|Homo sapiens pol protein protein.
Length = 863
Score = 33.9 bits (74), Expect = 0.69
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +3
Query: 147 GIPKIIITDQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYL 311
G+P +I D + ++S + F I HI + PY+PQ + +H LK +
Sbjct: 698 GVPHVIKMDNSSAYTSTRFAAFLKEFRISHITSIPYNPQGQAVVGHTHLYLKNLI 752
>BC078154-1|AAH78154.1| 595|Homo sapiens zinc finger protein 317
protein.
Length = 595
Score = 33.5 bits (73), Expect = 0.91
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +3
Query: 234 HIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLRTAMLAYNSNIHST--TGF 407
H+ + CG R+ STLK ++RS+ E + D + + N N+H TG
Sbjct: 496 HLVKKRVECRQCGKAFRNQSTLKTHMRSHTGEKPYECDHCGKAFSIGSNLNVHRRIHTGE 555
Query: 408 SPLELL 425
P E L
Sbjct: 556 KPYECL 561
>AK131351-1|BAD18506.1| 149|Homo sapiens PRECURSOR (EC 1.3.5.1).
protein.
Length = 149
Score = 33.5 bits (73), Expect = 0.91
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Frame = +3
Query: 18 HHNKFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVKY-----ISHIGIPKIIITDQGA 182
H +K++L L D + +++A+ + ETA +VK+ I G+P I +D G
Sbjct: 77 HQAGYKYLLVLVDTFSGWTEAF----ATKNETANLVVKFLLNEIIPRYGLPAAIGSDNGP 132
Query: 183 NFSSEVMKQLERLFGIK 233
F+S ++ + + I+
Sbjct: 133 AFTSSIVLSVSKALNIQ 149
>AF307097-1|AAL29191.1| 510|Homo sapiens ZNF317-4 protein protein.
Length = 510
Score = 33.5 bits (73), Expect = 0.91
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +3
Query: 234 HIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLRTAMLAYNSNIHST--TGF 407
H+ + CG R+ STLK ++RS+ E + D + + N N+H TG
Sbjct: 411 HLVKKRVECRQCGKAFRNQSTLKTHMRSHTGEKPYECDHCGKAFSIGSNLNVHRRIHTGE 470
Query: 408 SPLELL 425
P E L
Sbjct: 471 KPYECL 476
>AF307096-1|AAL29190.1| 478|Homo sapiens ZNF317-3 protein protein.
Length = 478
Score = 33.5 bits (73), Expect = 0.91
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +3
Query: 234 HIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLRTAMLAYNSNIHST--TGF 407
H+ + CG R+ STLK ++RS+ E + D + + N N+H TG
Sbjct: 379 HLVKKRVECRQCGKAFRNQSTLKTHMRSHTGEKPYECDHCGKAFSIGSNLNVHRRIHTGE 438
Query: 408 SPLELL 425
P E L
Sbjct: 439 KPYECL 444
>AF275255-1|AAL29188.1| 595|Homo sapiens ZNF317-2 protein protein.
Length = 595
Score = 33.5 bits (73), Expect = 0.91
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +3
Query: 234 HIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLRTAMLAYNSNIHST--TGF 407
H+ + CG R+ STLK ++RS+ E + D + + N N+H TG
Sbjct: 496 HLVKKRVECRQCGKAFRNQSTLKTHMRSHTGEKPYECDHCGKAFSIGSNLNVHRRIHTGE 555
Query: 408 SPLELL 425
P E L
Sbjct: 556 KPYECL 561
>AF148135-1|AAL29182.1| 563|Homo sapiens ZNF317-1 protein protein.
Length = 563
Score = 33.5 bits (73), Expect = 0.91
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +3
Query: 234 HIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLRTAMLAYNSNIHST--TGF 407
H+ + CG R+ STLK ++RS+ E + D + + N N+H TG
Sbjct: 464 HLVKKRVECRQCGKAFRNQSTLKTHMRSHTGEKPYECDHCGKAFSIGSNLNVHRRIHTGE 523
Query: 408 SPLELL 425
P E L
Sbjct: 524 KPYECL 529
>AB046808-1|BAB13414.1| 613|Homo sapiens KIAA1588 protein protein.
Length = 613
Score = 33.5 bits (73), Expect = 0.91
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +3
Query: 234 HIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLRTAMLAYNSNIHST--TGF 407
H+ + CG R+ STLK ++RS+ E + D + + N N+H TG
Sbjct: 514 HLVKKRVECRQCGKAFRNQSTLKTHMRSHTGEKPYECDHCGKAFSIGSNLNVHRRIHTGE 573
Query: 408 SPLELL 425
P E L
Sbjct: 574 KPYECL 579
>BC093825-1|AAH93825.1| 1037|Homo sapiens caspase recruitment domain
family, member 6 protein.
Length = 1037
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 231 KHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQ 335
+H+ A P PQ G LERS + + SY +++Q
Sbjct: 824 QHVQACPERPQMMGTLERSRAVASKIGHSYSLDSQ 858
>AF356193-1|AAK32718.1| 1037|Homo sapiens caspase recruitment domain
protein 6 protein.
Length = 1037
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 231 KHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQ 335
+H+ A P PQ G LERS + + SY +++Q
Sbjct: 824 QHVQACPERPQMMGTLERSRAVASKIGHSYSLDSQ 858
>AB209844-1|BAD93081.1| 872|Homo sapiens caspase recruitment domain
family, member 6 variant protein.
Length = 872
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 231 KHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQ 335
+H+ A P PQ G LERS + + SY +++Q
Sbjct: 789 QHVQACPERPQMMGTLERSRAVASKIGHSYSLDSQ 823
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,585,011
Number of Sequences: 237096
Number of extensions: 2222027
Number of successful extensions: 8845
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 8227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8823
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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