Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2117
(801 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros... 133 3e-31
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen... 133 3e-31
AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed... 126 5e-29
AY089684-1|AAL90422.1| 370|Drosophila melanogaster RH61266p pro... 124 1e-28
AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein ... 124 1e-28
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 119 5e-27
AY095181-1|AAM12274.1| 320|Drosophila melanogaster GM07634p pro... 115 9e-26
S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotei... 113 4e-25
AY089271-1|AAL90009.1| 451|Drosophila melanogaster AT07338p pro... 97 3e-20
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 92 9e-19
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro... 90 4e-18
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran... 79 9e-15
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 75 2e-13
AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse tran... 68 1e-11
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 67 3e-11
M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protei... 66 7e-11
EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein ... 66 7e-11
DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein ... 66 7e-11
DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein ... 66 7e-11
AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol pr... 66 7e-11
EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein ... 63 4e-10
X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D. m... 62 9e-10
AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ... 58 1e-08
AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed... 58 1e-08
U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse transc... 56 6e-08
AJ279888-1|CAB69645.1| 120|Drosophila melanogaster integrase pr... 50 5e-06
X15707-1|CAA33737.1| 267|Drosophila melanogaster protein ( Dros... 47 3e-05
AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein. 44 2e-04
AY058502-1|AAL13731.1| 280|Drosophila melanogaster LD21171p pro... 44 2e-04
AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein ... 41 0.002
AE014135-102|AAF59331.1| 131|Drosophila melanogaster CG11260-PA... 41 0.002
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros... 36 0.085
X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros... 35 0.11
AY071594-1|AAL49216.1| 698|Drosophila melanogaster RE64386p pro... 33 0.60
AE014296-2629|AAF49543.2| 698|Drosophila melanogaster CG5235-PA... 33 0.60
X04456-2|CAD27357.1| 1017|Drosophila melanogaster hypothetical p... 31 2.4
X04456-1|CAA28054.2| 1409|Drosophila melanogaster hypothetical p... 31 2.4
X02600-1|CAA26447.1| 1288|Drosophila melanogaster protein ( Dros... 31 2.4
X02599-1|CAA26444.1| 1409|Drosophila melanogaster 31 KD polyprot... 31 2.4
BT011428-1|AAR99086.1| 1409|Drosophila melanogaster SD14423p pro... 31 2.4
>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 1237
Score = 133 bits (321), Expect = 3e-31
Identities = 76/234 (32%), Positives = 128/234 (54%), Gaps = 5/234 (2%)
Frame = +3
Query: 3 PLPETHHNKFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVK-YISHIGIPKIIITDQG 179
PLP++ + ++ +TL DLTKY A P+ SA+ A+++ + +I G K ITD G
Sbjct: 975 PLPKSENGN-EYAVTLICDLTKYLVAIPIANKSAKTVAKAIFESFILKYGPMKTFITDMG 1033
Query: 180 ANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLR 359
+ + ++ L + IK+I ++ +H QT G +ERSH TL EY+RSYI ++ WD++L+
Sbjct: 1034 TEYKNSIITDLCKYLKIKNITSTAHHHQTVGVVERSHRTLNEYIRSYISTDKTDWDVWLQ 1093
Query: 360 TAMLAYNSNIHSTTGFSPLELLFGFKPYIPKSIDSL----DLNTYSDYIRALNHRLYYSR 527
+ +N+ + P EL+FG +PK + L + DY + +RL +
Sbjct: 1094 YFVYCFNTTQSMVHNYCPYELVFGRTSNLPKHFNKLHSIEPIYNIDDYAKESKYRLEVAY 1153
Query: 528 QKALQNIESSKERSKKYYDSHSKPITYNIGDMVYVRCHHKQNKALSPVWKGPYK 689
+A + +E+ KE++K+ YD K I +GD V +R ++ L + GPYK
Sbjct: 1154 ARARKLLEAHKEKNKENYDLKVKDIELEVGDKVLLR--NEVGHKLDFKYTGPYK 1205
>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent DNA
polymerase protein.
Length = 1000
Score = 133 bits (321), Expect = 3e-31
Identities = 76/234 (32%), Positives = 128/234 (54%), Gaps = 5/234 (2%)
Frame = +3
Query: 3 PLPETHHNKFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVK-YISHIGIPKIIITDQG 179
PLP++ + ++ +TL DLTKY A P+ SA+ A+++ + +I G K ITD G
Sbjct: 738 PLPKSENGN-EYAVTLICDLTKYLVAIPIANKSAKTVAKAIFESFILKYGPMKTFITDMG 796
Query: 180 ANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLR 359
+ + ++ L + IK+I ++ +H QT G +ERSH TL EY+RSYI ++ WD++L+
Sbjct: 797 TEYKNSIITDLCKYLKIKNITSTAHHHQTVGVVERSHRTLNEYIRSYISTDKTDWDVWLQ 856
Query: 360 TAMLAYNSNIHSTTGFSPLELLFGFKPYIPKSIDSL----DLNTYSDYIRALNHRLYYSR 527
+ +N+ + P EL+FG +PK + L + DY + +RL +
Sbjct: 857 YFVYCFNTTQSMVHNYCPYELVFGRTSNLPKHFNKLHSIEPIYNIDDYAKESKYRLEVAY 916
Query: 528 QKALQNIESSKERSKKYYDSHSKPITYNIGDMVYVRCHHKQNKALSPVWKGPYK 689
+A + +E+ KE++K+ YD K I +GD V +R ++ L + GPYK
Sbjct: 917 ARARKLLEAHKEKNKENYDLKIKDIELEVGDKVLLR--NEVGHKLDFKYTGPYK 968
>AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed DNA
polymerase protein.
Length = 826
Score = 126 bits (303), Expect = 5e-29
Identities = 71/233 (30%), Positives = 123/233 (52%), Gaps = 5/233 (2%)
Frame = +3
Query: 3 PLPETHHNKFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVK-YISHIGIPKIIITDQG 179
PLP++ + ++I+TL DLTKY P+ SA A+++ + +I G K I+D G
Sbjct: 564 PLPKSEYGN-EYIVTLICDLTKYLVTIPVANKSANTVAKAIFENFILKYGPMKTFISDMG 622
Query: 180 ANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLR 359
+ + V++ + + I+++ ++ YH QT G +ERSH T EY+RSYI ++ WD++++
Sbjct: 623 TEYKNNVIQDMCKYMKIENLTSTAYHHQTLGTIERSHRTFNEYIRSYISADKTDWDVWIQ 682
Query: 360 TAMLAYNSNIHSTTGFSPLELLFGFKPYIPKSIDSLD----LNTYSDYIRALNHRLYYSR 527
+N+ + P EL+FG P + + D L DY + + RL +
Sbjct: 683 YFTYCFNTTPSVMHNYCPYELVFGRLPRQFANFNKTDRIEPLYNIEDYSKEIKFRLEIAY 742
Query: 528 QKALQNIESSKERSKKYYDSHSKPITYNIGDMVYVRCHHKQNKALSPVWKGPY 686
++A +E +K K++YD + IGD V +R ++ L PV+ GPY
Sbjct: 743 KRARLLLEKAKSYRKQFYDKKTSDFQLKIGDKVILR--NESGHKLDPVYIGPY 793
>AY089684-1|AAL90422.1| 370|Drosophila melanogaster RH61266p
protein.
Length = 370
Score = 124 bits (299), Expect = 1e-28
Identities = 71/233 (30%), Positives = 122/233 (52%), Gaps = 5/233 (2%)
Frame = +3
Query: 3 PLPETHHNKFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVK-YISHIGIPKIIITDQG 179
PLP++ + ++I+TL DLTKY P+ SA A+++ + +I G K I+D G
Sbjct: 108 PLPKSEYGN-EYIVTLICDLTKYLVTIPVANKSANTVAKAIFENFILKYGPMKTFISDMG 166
Query: 180 ANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLR 359
+ + V++ + + I+++ ++ YH QT G +ERSH T EY+RSYI ++ WD++++
Sbjct: 167 TEYKNNVIQDMCKYMKIENLTSTAYHHQTLGTIERSHRTFNEYIRSYISADKTDWDVWIQ 226
Query: 360 TAMLAYNSNIHSTTGFSPLELLFGFKPYIPKSIDSLD----LNTYSDYIRALNHRLYYSR 527
+N+ + P EL+FG P + + D L DY + + RL +
Sbjct: 227 YFTYCFNTTPSVMHNYCPYELVFGRLPRQFANFNKADRIEPLYNIEDYSKEIKFRLEIAY 286
Query: 528 QKALQNIESSKERSKKYYDSHSKPITYNIGDMVYVRCHHKQNKALSPVWKGPY 686
++A +E +K K+ YD + IGD V +R ++ L PV+ GPY
Sbjct: 287 KRARLLLEKAKSYRKQLYDKKTSDFQLKIGDKVILR--NESGHKLDPVYIGPY 337
>AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein
protein.
Length = 826
Score = 124 bits (299), Expect = 1e-28
Identities = 71/233 (30%), Positives = 122/233 (52%), Gaps = 5/233 (2%)
Frame = +3
Query: 3 PLPETHHNKFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVK-YISHIGIPKIIITDQG 179
PLP++ + ++I+TL DLTKY P+ SA A+++ + +I G K I+D G
Sbjct: 564 PLPKSEYGN-EYIVTLICDLTKYLVTIPVANKSANTVAKAIFENFILKYGPMKTFISDMG 622
Query: 180 ANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLR 359
+ + V++ + + I+++ ++ YH QT G +ERSH T EY+RSYI ++ WD++++
Sbjct: 623 TEYKNNVIQDMCKYMKIENLTSTAYHHQTLGTIERSHRTFNEYIRSYISADKTDWDVWIQ 682
Query: 360 TAMLAYNSNIHSTTGFSPLELLFGFKPYIPKSIDSLD----LNTYSDYIRALNHRLYYSR 527
+N+ + P EL+FG P + + D L DY + + RL +
Sbjct: 683 YFTYCFNTTPSVMHNYCPYELVFGRLPRQFANFNKTDRIEPLYNIEDYSKEIKFRLEIAY 742
Query: 528 QKALQNIESSKERSKKYYDSHSKPITYNIGDMVYVRCHHKQNKALSPVWKGPY 686
++A +E +K K+ YD + IGD V +R ++ L PV+ GPY
Sbjct: 743 KRARLLLEKAKSYRKQLYDKKTSDFQLKIGDKVILR--NESGHKLDPVYIGPY 793
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 119 bits (286), Expect = 5e-27
Identities = 74/238 (31%), Positives = 122/238 (51%), Gaps = 5/238 (2%)
Frame = +3
Query: 3 PLPETHHNKFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVK-YISHIGIPKIIITDQG 179
PLP++ ++ +T+ DLTK+ P SA+ A+++ + ++ G K ITDQG
Sbjct: 733 PLPKSEDGN-EYAVTIICDLTKFLVTIPTPNKSAKTVAKAIFELFVLKYGPMKTFITDQG 791
Query: 180 ANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLR 359
+ + +M +L + I+++ +S +H QT G +ERSH T EY+RSYI N+ WD++L
Sbjct: 792 TEYKNSLMNELCKYMHIENLTSSAHHHQTLGTIERSHRTFNEYIRSYISVNKSDWDIWLP 851
Query: 360 TAMLAYNSNIHSTTGFSPLELLFGFKPYIPK---SIDSLD-LNTYSDYIRALNHRLYYSR 527
+N+ + P EL+FG P K I+ +D + DY + L RL S
Sbjct: 852 YFTYCFNTTPSIVHDYCPYELVFGRLPRQFKDFSKINKIDPIYNLDDYSKELKCRLELSY 911
Query: 528 QKALQNIESSKERSKKYYDSHSKPITYNIGDMVYVRCHHKQNKALSPVWKGPYKSLKI 701
+A + +E +K K YD ++ IGD V +R + L ++GPY + I
Sbjct: 912 NRARRMLEKAKADRKLRYDRNTNNFELKIGDKVLLR--KETGHKLDKRYEGPYDVVDI 967
>AY095181-1|AAM12274.1| 320|Drosophila melanogaster GM07634p
protein.
Length = 320
Score = 115 bits (276), Expect = 9e-26
Identities = 63/196 (32%), Positives = 109/196 (55%), Gaps = 5/196 (2%)
Frame = +3
Query: 3 PLPETHHNKFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVK-YISHIGIPKIIITDQG 179
PLP++ + ++ +TL DLTKY A P+ SA+ A+++ + +I G K ITD G
Sbjct: 126 PLPKSENGN-EYAVTLICDLTKYLVAIPIANKSAKTVAKAIFESFILKYGPMKTFITDMG 184
Query: 180 ANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLR 359
+ + ++ L + IK+I ++ +H QT G +ERSH TL EY+RSYI ++ WD++L+
Sbjct: 185 TEYKNSIITDLCKYLKIKNITSTAHHHQTVGVVERSHRTLNEYIRSYISTDKTDWDVWLQ 244
Query: 360 TAMLAYNSNIHSTTGFSPLELLFGFKPYIPKSIDSL----DLNTYSDYIRALNHRLYYSR 527
+ +N+ + P EL+FG +PK + L + DY + +RL +
Sbjct: 245 YFVYCFNTTQSMVHNYCPYELVFGRTSNLPKHFNKLHSIEPIYNIDDYAKESKYRLEVAY 304
Query: 528 QKALQNIESSKERSKK 575
+A + +E+ K++ KK
Sbjct: 305 ARARKLLEAHKKKKKK 320
>S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotein
protein.
Length = 624
Score = 113 bits (271), Expect = 4e-25
Identities = 69/233 (29%), Positives = 122/233 (52%), Gaps = 5/233 (2%)
Frame = +3
Query: 3 PLPETHHNKFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVK-YISHIGIPKIIITDQG 179
PLP + + ++ +T+ DLTKY P+ SA+ A+++ + +I G K IITD G
Sbjct: 362 PLPRSENGN-EYAVTIICDLTKYLVTVPIPNKSAKSVAKAVFENFILKYGPMKTIITDMG 420
Query: 180 ANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLR 359
+ ++++ L + IK+I ++ +H QT G +ERSH T EY+RSYI ++ WD++++
Sbjct: 421 TEYKNQIIDDLCKYMKIKNITSTAHHHQTLGTIERSHRTFNEYVRSYISVDKTDWDIWIQ 480
Query: 360 TAMLAYNSNIHSTTGFSPLELLFGFKP--YIP-KSIDSLD-LNTYSDYIRALNHRLYYSR 527
+N+ + P EL+FG P +I ID +D + DY + + RL +
Sbjct: 481 YFTYCFNTTPSVVHDYCPYELVFGRLPRQFIDFNRIDRIDPIYNMDDYSKEVKLRLEIAY 540
Query: 528 QKALQNIESSKERSKKYYDSHSKPITYNIGDMVYVRCHHKQNKALSPVWKGPY 686
++A ++ +K K YD + IGD + ++ ++ L + GPY
Sbjct: 541 RRAKNMLDKAKADRKIKYDRNISNFELKIGDKILLK--NETGHKLDNNYLGPY 591
>AY089271-1|AAL90009.1| 451|Drosophila melanogaster AT07338p
protein.
Length = 451
Score = 96.7 bits (230), Expect = 3e-20
Identities = 59/238 (24%), Positives = 114/238 (47%), Gaps = 10/238 (4%)
Frame = +3
Query: 3 PLPETHHNKFKFILTLQDDLTKYSQAYPMVTCSAEETARSL-VKYISHIGIPKIIITDQG 179
PLP + H +L L D +K+++ PM + E +++ + ++ G+PK++ITD
Sbjct: 172 PLPRSKHGN-SMLLVLVDRFSKWTEIVPMRRATTETMRKAVRERIVARYGVPKVMITDNN 230
Query: 180 ANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLR 359
+ ++ G++H +PY PQ ER++ T+K + + +Q TWD +
Sbjct: 231 VQLTIRAFRKFLEELGVRHQLTAPYTPQE-NPTERANRTVKTMIAQFTGADQRTWDEHWP 289
Query: 360 TAMLAYNSNIHSTTGFSPLELLFGFKPYIPKSI-DSLDLNTYSDYIRALNH--RLYYSRQ 530
LA N+++ TTG+SP + G +P +P ++ D T + + +L +
Sbjct: 290 ELQLAVNTSVAETTGYSPAFITQGREPRLPNALFDEKTTGTGKCTQTPVENAEKLKEIFE 349
Query: 531 KALQNIESSKERSKKYYDSHSKPITYNIGDMVYVRCHHKQNKA------LSPVWKGPY 686
+N+E + + ++Y+ +P + D V+ + HH A L+P + GPY
Sbjct: 350 LVRRNMEKAVQDQARHYNLRRRPWKPKVRDTVWAKEHHLSKAAEGFAAKLAPRFDGPY 407
>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
polyprotein protein.
Length = 1333
Score = 91.9 bits (218), Expect = 9e-19
Identities = 58/231 (25%), Positives = 106/231 (45%), Gaps = 4/231 (1%)
Frame = +3
Query: 27 KFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSSEVMK 206
++K+IL D +K+ +P + EE + L + + G PK I++D+G F+S +
Sbjct: 1055 QYKYILATVDAFSKFVWLFPTKSTGQEEVVKRLTDWSNIFGFPKRIVSDKGTAFTSGAFE 1114
Query: 207 QLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLRTAMLAYNSN 386
Q ++H+ + + G +ER + + + + W Y+ A N +
Sbjct: 1115 QFMSSHNVEHVCTTTGVARGNGQIERVNRLILAIISKLSSDEPSKWYKYVPEVQKAINCH 1174
Query: 387 IHSTTGFSPLELLFGFKPYIPKSIDSLDLNTYSDYIRALNHRLYYSRQKALQNIESSKER 566
+HS+ SP E++FG K Y L+L + + N Y RQ +NIE +++
Sbjct: 1175 VHSSLKLSPFEVMFGTKMYTRVEDRLLEL-LQEEVVCQFNEDRYEMRQLVKRNIEQAQKD 1233
Query: 567 SKKYYDSHSK-PITYNIGDMVYV-RCHHKQNKALSPVWKGPYK--SLKING 707
K+ YD + Y GD+V + R + ++ + GPY+ +K NG
Sbjct: 1234 YKRNYDKKRRAEYKYKAGDLVAIKRTQFVAGRKMASGYLGPYEVTGVKDNG 1284
>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p protein.
Length = 1026
Score = 89.8 bits (213), Expect = 4e-18
Identities = 58/231 (25%), Positives = 105/231 (45%), Gaps = 4/231 (1%)
Frame = +3
Query: 27 KFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSSEVMK 206
++K+IL D +K+ +P + EE + L + + G PK I++D+G F+S +
Sbjct: 748 QYKYILATVDAFSKFVWLFPTKSTGQEEVVKRLTDWSNIFGFPKRIVSDKGTAFTSGAFE 807
Query: 207 QLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLRTAMLAYNSN 386
Q ++H+ + + G +ER + + + W Y+ A N +
Sbjct: 808 QFMSSHNVEHVCTTTGVARGNGQIERVNRLNLAIISKLSSDEPSKWYKYVPEVQKAINCH 867
Query: 387 IHSTTGFSPLELLFGFKPYIPKSIDSLDLNTYSDYIRALNHRLYYSRQKALQNIESSKER 566
+HS+ SP E++FG K Y L+L + + N Y RQ +NIE +++
Sbjct: 868 VHSSLKLSPFEVMFGTKMYTRVEDRLLEL-LQEEVVCQFNEDRYEMRQLVKRNIEQAQKD 926
Query: 567 SKKYYDSHSK-PITYNIGDMVYV-RCHHKQNKALSPVWKGPYK--SLKING 707
K+ YD + Y GD+V + R + ++ + GPY+ +K NG
Sbjct: 927 YKRNYDKKRRAEYKYKAGDLVAIKRTQFVAGRKMASGYLGPYEVTGVKDNG 977
>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
transcriptase protein.
Length = 1088
Score = 78.6 bits (185), Expect = 9e-15
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 5/210 (2%)
Frame = +3
Query: 42 LTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSSEVMKQLERL 221
LT+ D +K++ AYP+ + ++L +IS GIPK +I DQGA F+S++ +
Sbjct: 832 LTIIDKFSKFAAAYPITNRNCINVVKALKHFISQFGIPKKLIYDQGAEFASDMFNKFCTQ 891
Query: 222 FGIKHIFASPYHPQTCGALERSHSTLKEYLRSYI-VENQH----TWDLYLRTAMLAYNSN 386
F I S + +ER HSTL E R + V Q D + ++ YN+
Sbjct: 892 FNIDLHVTSFQQSSSNSPVERLHSTLTEIYRIILDVRKQQKLSSEHDEIMSETLITYNNA 951
Query: 387 IHSTTGFSPLELLFGFKPYIPKSIDSLDLNTYSDYIRALNHRLYYSRQKALQNIESSKER 566
IHS T +P EL G ++I + + Y + +LY L N R
Sbjct: 952 IHSATKHTPFELFNGRTHIFNQTIQFNNEHDYLTKLNEFREKLYPLITDKLSN--DVVRR 1009
Query: 567 SKKYYDSHSKPITYNIGDMVYVRCHHKQNK 656
+ K ++ + P+ D + +R +++NK
Sbjct: 1010 TLKLNETRTDPVDLQ-PDTLVLRKENRRNK 1038
>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
transcriptase protein.
Length = 1217
Score = 74.5 bits (175), Expect = 2e-13
Identities = 53/216 (24%), Positives = 102/216 (47%), Gaps = 5/216 (2%)
Frame = +3
Query: 36 FILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSSEVMKQLE 215
F LT+ D +K++ YP+ + +++ + S G+PK +I DQG F +++ ++
Sbjct: 941 FNLTIIDKFSKFAAVYPIPNRNGINCIKAIKNFFSQFGLPKKLIHDQGVEFCNDIFRKFC 1000
Query: 216 RLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYI-VENQH----TWDLYLRTAMLAYN 380
+ I S + +ER HS+L E R + +H + + ++ YN
Sbjct: 1001 SQYNILLHVTSFQQSSSNSPVERLHSSLTEIYRIILDTRKKHKLPTDHEEIMSETVITYN 1060
Query: 381 SNIHSTTGFSPLELLFGFKPYIPKSIDSLDLNTYSDYIRALNHRLYYSRQKALQNIESSK 560
+ IHSTT +P EL G K+I + + Y + + +LY ++ L +++
Sbjct: 1061 NAIHSTTKHTPFELFNGRTHLFEKTIIPNNEHDYLNKLNTFQDKLYSEIKEKLST--NTQ 1118
Query: 561 ERSKKYYDSHSKPITYNIGDMVYVRCHHKQNKALSP 668
+R +K S +P T ++ R +++NK L+P
Sbjct: 1119 QRIEKLNTSRVEPTTVQPNSTIF-RKENRRNK-LTP 1152
>AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse
transcriptase-like polymeraseprotein.
Length = 1059
Score = 68.1 bits (159), Expect = 1e-11
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
Frame = +3
Query: 39 ILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSSEVMK-QLE 215
+LT D +K + + + + E+ ++L + + G+PK+I+ D + +S +K L
Sbjct: 835 VLTAIDKFSKLAMGRVIKSKAVEDIRKALRDIVFYYGVPKLIVMDNEKSLNSASIKFMLT 894
Query: 216 RLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHT-WDLYLRTAMLAYNSNIH 392
GI+ A PY G +ER HSTL E +R + H ++ L A+ YN +H
Sbjct: 895 DQLGIELYKAPPYKSTVNGQIERFHSTLSEIMRCLKGDGTHRGFEELLDRAIYEYNYTVH 954
Query: 393 STTGFSPLELLFG 431
S T PLE+ FG
Sbjct: 955 SVTKKRPLEVFFG 967
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 66.9 bits (156), Expect = 3e-11
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 1/136 (0%)
Frame = +3
Query: 33 KFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSSEVMKQL 212
K IL + D TK+ + Y T + +E +SL Y PK II+D+GA F+S
Sbjct: 1286 KHILVIVDAFTKFVRLYATKTTNTKEVIQSLNDYFRAYSRPKCIISDRGACFTSGDFDSF 1345
Query: 213 ERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHT-WDLYLRTAMLAYNSNI 389
+ +KHI + PQ G +ER + +L + I +Q WDL L N+ +
Sbjct: 1346 LKECNVKHIKIATGSPQANGQVERINRSLGPMISKLIEPDQGLHWDLVLEKVEYTLNNTL 1405
Query: 390 HSTTGFSPLELLFGFK 437
H + P +LFG +
Sbjct: 1406 HRSIKQYPSIMLFGLQ 1421
>M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protein
protein.
Length = 1010
Score = 65.7 bits (153), Expect = 7e-11
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Frame = +3
Query: 33 KFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSSE-VMKQ 209
K LT D +KY+ P+V+ + + L++ I+ K + D F+SE V
Sbjct: 795 KLFLTCIDKFSKYAIVQPVVSRTIVDITAPLLQIINLFPNIKTVYCDNEPAFNSETVTSM 854
Query: 210 LERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQ--HTWDLYLRTAMLAYNS 383
L+ FGI + A P H + G +ER HSTL E R ++ + T +L LR A + YN
Sbjct: 855 LKNSFGIDIVNAPPLHSSSNGQVERFHSTLAEIARCLKLDKKTNDTVELILR-ATIEYNK 913
Query: 384 NIHSTTGFSPLELL 425
+HS T P+E++
Sbjct: 914 TVHSVTRERPIEVV 927
>EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 65.7 bits (153), Expect = 7e-11
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Frame = +3
Query: 33 KFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSSE-VMKQ 209
K LT D +KY+ P+V+ + + L++ I+ K + D F+SE V
Sbjct: 830 KLFLTCIDKFSKYAIVQPVVSRTIVDITAPLLQIINLFPNIKTVYCDNEPAFNSETVTSM 889
Query: 210 LERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQ--HTWDLYLRTAMLAYNS 383
L+ FGI + A P H + G +ER HSTL E R ++ + T +L LR A + YN
Sbjct: 890 LKNSFGIDIVNAPPLHSSSNGQVERFHSTLAEIARCLKLDKKTNDTVELILR-ATIEYNK 948
Query: 384 NIHSTTGFSPLELL 425
+HS T P+E++
Sbjct: 949 TVHSVTRERPIEVV 962
>DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 65.7 bits (153), Expect = 7e-11
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Frame = +3
Query: 33 KFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSSE-VMKQ 209
K LT D +KY+ P+V+ + + L++ I+ K + D F+SE V
Sbjct: 795 KLFLTCIDKFSKYAIVQPVVSRTIVDITAPLLQIINLFPNIKTVYCDNEPAFNSETVTSM 854
Query: 210 LERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQ--HTWDLYLRTAMLAYNS 383
L+ FGI + A P H + G +ER HSTL E R ++ + T +L LR A + YN
Sbjct: 855 LKNSFGIDIVNAPPLHSSSNGQVERFHSTLAEIARCLKLDKKTNDTVELILR-ATIEYNK 913
Query: 384 NIHSTTGFSPLELL 425
+HS T P+E++
Sbjct: 914 TVHSVTRERPIEVV 927
>DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 65.7 bits (153), Expect = 7e-11
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Frame = +3
Query: 33 KFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSSE-VMKQ 209
K LT D +KY+ P+V+ + + L++ I+ K + D F+SE V
Sbjct: 795 KLFLTCIDKFSKYAIVQPVVSRTIVDITAPLLQIINLFPNIKTVYCDNEPAFNSETVTSM 854
Query: 210 LERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQ--HTWDLYLRTAMLAYNS 383
L+ FGI + A P H + G +ER HSTL E R ++ + T +L LR A + YN
Sbjct: 855 LKNSFGIDIVNAPPLHSSSNGQVERFHSTLAEIARCLKLDKKTNDTVELILR-ATIEYNK 913
Query: 384 NIHSTTGFSPLELL 425
+HS T P+E++
Sbjct: 914 TVHSVTRERPIEVV 927
>AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol
protein.
Length = 1463
Score = 65.7 bits (153), Expect = 7e-11
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Frame = +3
Query: 33 KFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSSE-VMKQ 209
K LT D +KY+ P+V+ + + L++ I+ K + D F+SE V
Sbjct: 1248 KLFLTCIDKFSKYAIVQPVVSRTIVDITAPLLQIINLFPNIKTVYCDNEPAFNSETVTSM 1307
Query: 210 LERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQ--HTWDLYLRTAMLAYNS 383
L+ FGI + A P H + G +ER HSTL E R ++ + T +L LR A + YN
Sbjct: 1308 LKNSFGIDIVNAPPLHSSSNGQVERFHSTLAEIARCLKLDKKTNDTVELILR-ATIEYNK 1366
Query: 384 NIHSTTGFSPLELL 425
+HS T P+E++
Sbjct: 1367 TVHSVTRERPIEVV 1380
>EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 63.3 bits (147), Expect = 4e-10
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 3/134 (2%)
Frame = +3
Query: 33 KFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSSE-VMKQ 209
K LT D +KY+ P+V+ + + L++ I+ K + D F+SE V
Sbjct: 830 KLFLTCIDKFSKYAIVQPVVSRTIVDITAPLLQIINLFPNIKTVYCDNEPAFNSETVTSM 889
Query: 210 LERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQ--HTWDLYLRTAMLAYNS 383
L+ FGI + A P H + G +ER HSTL E ++ + T +L LR A + YN
Sbjct: 890 LKNSFGIDIVNAPPLHSSSNGQVERFHSTLAEIASCLKLDKKTNDTVELILR-ATIEYNK 948
Query: 384 NIHSTTGFSPLELL 425
+HS T P+E++
Sbjct: 949 TVHSVTRERPIEVV 962
>X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D.
melanogaster retrotransposongypsy gene fragment for
reverse transcriptase-like enzyme.).
Length = 930
Score = 62.1 bits (144), Expect = 9e-10
Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 3/126 (2%)
Frame = +3
Query: 33 KFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSSE-VMKQ 209
K LT D +KY+ P+V+ + + L++ I+ K + D F+SE V
Sbjct: 800 KLFLTCIDKFSKYAIVQPVVSRTIVDITAPLLQIINLFPNIKTVYCDNEPAFNSETVTSM 859
Query: 210 LERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQ--HTWDLYLRTAMLAYNS 383
L+ FGI + A P H + G +ER HSTL E R ++ + T +L LR A + YN
Sbjct: 860 LKNTFGIDIVNAPPLHSSSNGQVERFHSTLAEIARCLKLDKKTSDTVELILR-ATIEYNK 918
Query: 384 NIHSTT 401
+HS T
Sbjct: 919 TVHSVT 924
>AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein
protein.
Length = 1037
Score = 58.4 bits (135), Expect = 1e-08
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 2/129 (1%)
Frame = +3
Query: 42 LTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSSEVMKQLERL 221
+T D ++KY+ A + S ++ I ++G PK I+TD F V+KQ
Sbjct: 817 VTSIDKMSKYATAQHIKDRSWISLLNAIKLRIQYLGKPKKIVTDN--EFDIVVIKQFLLE 874
Query: 222 FGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVE--NQHTWDLYLRTAMLAYNSNIHS 395
I F +PY +ER H TL E++R Y + N T + A++ YN+ IHS
Sbjct: 875 NNIDIHFTTPYKKTGNSDVERLHLTLNEHMRLYNADPNNFDTIQENVYKAIVCYNNTIHS 934
Query: 396 TTGFSPLEL 422
TT P++L
Sbjct: 935 TTNIRPIDL 943
>AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed DNA
polymerase protein.
Length = 1013
Score = 58.0 bits (134), Expect = 1e-08
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 3/134 (2%)
Frame = +3
Query: 33 KFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSSE-VMKQ 209
K+ LT D +K++ P+++ + E+ L++ ++ K I D + S+ ++
Sbjct: 798 KYFLTCVDKFSKFAMVQPILSRTIEDLKAPLLQLMNVFPKAKTIYCDNEPSLKSQTIVAM 857
Query: 210 LERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVEN--QHTWDLYLRTAMLAYNS 383
LE FG+ A P H + G +ER HSTL E R ++ T +L L A YN
Sbjct: 858 LENHFGVSISNAPPLHSVSNGQVERFHSTLIELARCLKIDKGISDTVELVL-LATARYNM 916
Query: 384 NIHSTTGFSPLELL 425
+IHS P E++
Sbjct: 917 SIHSVINKKPAEVM 930
>U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse
transcriptase polyprotein protein.
Length = 1041
Score = 56.0 bits (129), Expect = 6e-08
Identities = 37/144 (25%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Frame = +3
Query: 36 FILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSSEVMKQL- 212
+ LT D +K++ P+ + + + ++++ ++ K I D + +SE +K L
Sbjct: 827 YFLTCIDKFSKFAIVQPIGSRTITDLEPAIMQLMNFFPHSKTIFCDNEPSINSESIKSLL 886
Query: 213 ERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVEN--QHTWDLYLRTAMLAYNSN 386
+ F + A P H + G +ER HSTL E R +++ T +L L+ A + YN
Sbjct: 887 KNRFNVDIANAPPLHSTSNGQVERFHSTLLEIARCLKLDSGMNDTVNLILQ-ATIEYNKT 945
Query: 387 IHSTTGFSPLELLFGFKPYIPKSI 458
+HS T P++++ P + I
Sbjct: 946 VHSVTNRRPIDIIHSTPPELANEI 969
>AJ279888-1|CAB69645.1| 120|Drosophila melanogaster integrase
protein.
Length = 120
Score = 49.6 bits (113), Expect = 5e-06
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = +3
Query: 33 KFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSSE-VMKQ 209
K LT D +KY+ P+V+ + + L++ I+ K + D F+SE V
Sbjct: 27 KLFLTCIDKFSKYAIVQPVVSRTIVDITAPLLQIINLFPNIKTVYCDNEPAFNSETVTSM 86
Query: 210 LERLFGIKHIFASPYHPQTCGALERSHSTLKE 305
L+ FGI + A P H + G +ER HSTL E
Sbjct: 87 LKNSFGIDIVNAPPLHSSSNGQVERFHSTLAE 118
>X15707-1|CAA33737.1| 267|Drosophila melanogaster protein (
Drosophila melanogasterDNA sequence (isolate CBS) for
18S rRNA (3'end), 5.8SrRNA and 28S rRNA (5'end). ).
Length = 267
Score = 46.8 bits (106), Expect = 3e-05
Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +3
Query: 33 KFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSSEVMK-Q 209
K+ LT D +K++ + + + E+ ++++ ++ +++ D + +S +
Sbjct: 76 KYFLTCIDKFSKFAIEQHVHSRTIEDLKPAILQIMNFFPRARVVYCDNEPSLNSHTISTM 135
Query: 210 LERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDL-YLRTAMLAYNSN 386
L+ FG+ A P H + G +ER HSTL E R ++ T + + A YN +
Sbjct: 136 LDNHFGVSIANAPPLHSVSNGQVERFHSTLLELARCLKIDKGITDTVEIILLATAKYNES 195
Query: 387 IHSTT 401
IHS T
Sbjct: 196 IHSLT 200
>AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.
Length = 1003
Score = 44.0 bits (99), Expect = 2e-04
Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 1/133 (0%)
Frame = +3
Query: 33 KFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSSEVMKQL 212
+ L+ D +K+++ + + + ++ +LV+ + + PK++++D +
Sbjct: 775 RLYLSCIDKFSKFAKLFHLQSKASVHLRETLVEALHYFTAPKVLVSDNERGLLCPTVLNY 834
Query: 213 ERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYL-RTAMLAYNSNI 389
R I +A + G +ER HST E R E + L A+ YN+++
Sbjct: 835 LRSLDIDLYYAPTQKSEVNGQVERFHSTFLEIYRCLKDELPTFKPVELVHIAVDRYNTSV 894
Query: 390 HSTTGFSPLELLF 428
HS T P ++ F
Sbjct: 895 HSVTNRKPADVFF 907
>AY058502-1|AAL13731.1| 280|Drosophila melanogaster LD21171p
protein.
Length = 280
Score = 44.0 bits (99), Expect = 2e-04
Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 1/133 (0%)
Frame = +3
Query: 33 KFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSSEVMKQL 212
+ L+ D +K+++ + + + ++ +LV+ + + PK++++D +
Sbjct: 52 RLYLSCIDKFSKFAKLFHLQSKASVHLRETLVEALHYFTAPKVLVSDNERGLLCPTVLNY 111
Query: 213 ERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYL-RTAMLAYNSNI 389
R I +A + G +ER HST E R E + L A+ YN+++
Sbjct: 112 LRSLDIDLYYAPTQKSEVNGQVERFHSTFLEIYRCLKDELPTFKPVELVHIAVDRYNTSV 171
Query: 390 HSTTGFSPLELLF 428
HS T P ++ F
Sbjct: 172 HSVTNRKPADVFF 184
>AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein
protein.
Length = 1006
Score = 41.1 bits (92), Expect = 0.002
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 3/139 (2%)
Frame = +3
Query: 33 KFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSSEVMKQL 212
K L+ D +K++ + T E +L++ + +G PK++ D+ FSS +K+
Sbjct: 780 KHYLSCIDTYSKFATLEQIKTKDWIECKNALMRIFNQLGKPKLLKADRDGAFSSLALKEW 839
Query: 213 ERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSY-IVENQHTWDLYLRTAMLAYNSNI 389
G++ + +ER H T+ E +R ++N T + T + YN
Sbjct: 840 LETEGVELQLNTT--KTGVADIERFHKTINEKIRIINTMKNTETDLSKIETILYTYNHKT 897
Query: 390 -HSTTGFSPLEL-LFGFKP 440
H TTG +P + L+ +P
Sbjct: 898 KHDTTGQTPAHIFLYAGQP 916
>AE014135-102|AAF59331.1| 131|Drosophila melanogaster CG11260-PA
protein.
Length = 131
Score = 40.7 bits (91), Expect = 0.002
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = +3
Query: 36 FILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFSSEVMKQLE 215
FI + D +KY YP + EE + + + G P I++D+GA F+S + K+
Sbjct: 15 FIAVIVDAFSKYVWFYPTRSTGVEEVLNCIERQALNFGKPFRIVSDRGAAFTSHLFKEYY 74
Query: 216 RLFGIKHI 239
I+H+
Sbjct: 75 EKHQIRHL 82
>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
Drosophila melanogastercopia-like element 17.6. ).
Length = 1058
Score = 35.5 bits (78), Expect = 0.085
Identities = 34/149 (22%), Positives = 69/149 (46%), Gaps = 4/149 (2%)
Frame = +3
Query: 12 ETHHNKFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFS 191
+ + ++ K ++ D +K++ + T E +L++ + +G PK++ D+ FS
Sbjct: 826 DIYSSEGKHYVSCIDIYSKFATLEEIKTKDWIECKNALMRIFNQLGKPKLLKADRDGAFS 885
Query: 192 SEVMKQLERLFGIKHIFASPYHPQTCGA-LERSHSTLKEYLRSY-IVENQHTWDLYLRTA 365
S +K R + + +T A +ER H T+ E +R +++ T + T
Sbjct: 886 SLALK---RWLESEEVELQLNTTKTGVADIERLHKTINEKIRIIKTSDDEETKLSKMETV 942
Query: 366 MLAYNSNI-HSTTGFSPLEL-LFGFKPYI 446
+ YN H TTG +P + L+ +P +
Sbjct: 943 LNIYNHKTKHDTTGQTPAHIFLYAGQPIL 971
>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
Drosophila melanogastertransposable element 297. ).
Length = 1059
Score = 35.1 bits (77), Expect = 0.11
Identities = 30/139 (21%), Positives = 61/139 (43%), Gaps = 2/139 (1%)
Frame = +3
Query: 12 ETHHNKFKFILTLQDDLTKYSQAYPMVTCSAEETARSLVKYISHIGIPKIIITDQGANFS 191
+ + ++ K ++ D +K++ + T E +L++ + +G PK++ D+ FS
Sbjct: 826 DIYSSEGKHYISCIDIYSKFATLEQIKTKDWIECRNALMRIFNQLGKPKLLKADRDGAFS 885
Query: 192 SEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDL-YLRTAM 368
S +K+ ++ + +ER H T+ E +R + L + T +
Sbjct: 886 SLALKRWLEEEEVELQLNTA--KNGVADVERLHKTINEKIRIINSSDDEEVKLSKIETIL 943
Query: 369 LAYNSNI-HSTTGFSPLEL 422
YN I H TTG P ++
Sbjct: 944 YTYNQKIKHDTTGQRPAQI 962
>AY071594-1|AAL49216.1| 698|Drosophila melanogaster RE64386p
protein.
Length = 698
Score = 32.7 bits (71), Expect = 0.60
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +3
Query: 207 QLERLFGIKHIFASPYHPQTCGALERS---HSTLKE-YLRSYIVENQHTWDLYLRTAMLA 374
+L L G +HI Y P G ER+ H TL E + Y + +WDL++R+A
Sbjct: 238 RLPELTGKQHIIG--YEPLLSGKYERNVVHHMTLFECQSKIYSGSDPSSWDLWVRSAGTV 295
Query: 375 YNSNI 389
NSN+
Sbjct: 296 CNSNL 300
>AE014296-2629|AAF49543.2| 698|Drosophila melanogaster CG5235-PA
protein.
Length = 698
Score = 32.7 bits (71), Expect = 0.60
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +3
Query: 207 QLERLFGIKHIFASPYHPQTCGALERS---HSTLKE-YLRSYIVENQHTWDLYLRTAMLA 374
+L L G +HI Y P G ER+ H TL E + Y + +WDL++R+A
Sbjct: 238 RLPELTGKQHIIG--YEPLLSGKYERNVVHHMTLFECQSKIYSGSDPSSWDLWVRSAGTV 295
Query: 375 YNSNI 389
NSN+
Sbjct: 296 CNSNL 300
>X04456-2|CAD27357.1| 1017|Drosophila melanogaster hypothetical
protein protein.
Length = 1017
Score = 30.7 bits (66), Expect = 2.4
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 7/115 (6%)
Frame = +3
Query: 123 LVKYISHIGIPKIII-TDQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTL 299
+ K +H + + + D G + S M+Q GI + P+ PQ G ER T+
Sbjct: 141 VAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTI 200
Query: 300 KEYLRSYIVE---NQHTWDLYLRTAMLAYN---SNIHSTTGFSPLELLFGFKPYI 446
E R+ + ++ W + TA N S + +P E+ KPY+
Sbjct: 201 TEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYL 255
>X04456-1|CAA28054.2| 1409|Drosophila melanogaster hypothetical
protein protein.
Length = 1409
Score = 30.7 bits (66), Expect = 2.4
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 7/115 (6%)
Frame = +3
Query: 123 LVKYISHIGIPKIII-TDQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTL 299
+ K +H + + + D G + S M+Q GI + P+ PQ G ER T+
Sbjct: 533 VAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTI 592
Query: 300 KEYLRSYIVE---NQHTWDLYLRTAMLAYN---SNIHSTTGFSPLELLFGFKPYI 446
E R+ + ++ W + TA N S + +P E+ KPY+
Sbjct: 593 TEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYL 647
>X02600-1|CAA26447.1| 1288|Drosophila melanogaster protein (
Drosophila melanogastervirus like particle RNA (VLP
H-RNA). ).
Length = 1288
Score = 30.7 bits (66), Expect = 2.4
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 7/115 (6%)
Frame = +3
Query: 123 LVKYISHIGIPKIII-TDQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTL 299
+ K +H + + + D G + S M+Q GI + P+ PQ G ER T+
Sbjct: 533 VAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTI 592
Query: 300 KEYLRSYIVE---NQHTWDLYLRTAMLAYN---SNIHSTTGFSPLELLFGFKPYI 446
E R+ + ++ W + TA N S + +P E+ KPY+
Sbjct: 593 TEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYL 647
>X02599-1|CAA26444.1| 1409|Drosophila melanogaster 31 KD polyprotein
protein.
Length = 1409
Score = 30.7 bits (66), Expect = 2.4
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 7/115 (6%)
Frame = +3
Query: 123 LVKYISHIGIPKIII-TDQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTL 299
+ K +H + + + D G + S M+Q GI + P+ PQ G ER T+
Sbjct: 533 VAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTI 592
Query: 300 KEYLRSYIVE---NQHTWDLYLRTAMLAYN---SNIHSTTGFSPLELLFGFKPYI 446
E R+ + ++ W + TA N S + +P E+ KPY+
Sbjct: 593 TEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYL 647
>BT011428-1|AAR99086.1| 1409|Drosophila melanogaster SD14423p
protein.
Length = 1409
Score = 30.7 bits (66), Expect = 2.4
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 7/115 (6%)
Frame = +3
Query: 123 LVKYISHIGIPKIII-TDQGANFSSEVMKQLERLFGIKHIFASPYHPQTCGALERSHSTL 299
+ K +H + + + D G + S M+Q GI + P+ PQ G ER T+
Sbjct: 533 VAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTI 592
Query: 300 KEYLRSYIVE---NQHTWDLYLRTAMLAYN---SNIHSTTGFSPLELLFGFKPYI 446
E R+ + ++ W + TA N S + +P E+ KPY+
Sbjct: 593 TEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYL 647
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,700,381
Number of Sequences: 53049
Number of extensions: 682311
Number of successful extensions: 1787
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1755
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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